RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 MCCP23508 829 aa17.23■□□□□ 0.35
C9orf47-203ENST00000375851 ANKRD50Q9ULJ7 1429 aa17.23■□□□□ 0.35
C9orf47-203ENST00000375851 EVC2Q86UK5 1308 aa17.23■□□□□ 0.35
C9orf47-203ENST00000375851 TAOK2Q9UL54 1235 aa17.23■□□□□ 0.35
C9orf47-203ENST00000375851 AMPHP49418 695 aa17.23■□□□□ 0.35
C9orf47-203ENST00000375851 NESP48681 1621 aa17.23■□□□□ 0.35
C9orf47-203ENST00000375851 NAP1L2Q9ULW6 460 aaPredicted RBP17.22■□□□□ 0.35
C9orf47-203ENST00000375851 ZBED9Q6R2W3 1325 aa17.22■□□□□ 0.35
C9orf47-203ENST00000375851 CGNL1Q0VF96 1302 aa17.22■□□□□ 0.35
C9orf47-203ENST00000375851 FYCO1Q9BQS8 1478 aa17.22■□□□□ 0.35
C9orf47-203ENST00000375851 PRXQ9BXM0 1461 aa17.22■□□□□ 0.35
C9orf47-203ENST00000375851 CHMP4AQ9BY43 222 aa17.21■□□□□ 0.35
C9orf47-203ENST00000375851 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
C9orf47-203ENST00000375851 MINK1Q8N4C8 1332 aaPredicted RBP17.2■□□□□ 0.34
C9orf47-203ENST00000375851 KIF7Q2M1P5 1343 aa17.19■□□□□ 0.34
C9orf47-203ENST00000375851 GLIPR1L2Q4G1C9 344 aa17.19■□□□□ 0.34
C9orf47-203ENST00000375851 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
C9orf47-203ENST00000375851 PLCB2Q00722 1185 aa17.19■□□□□ 0.34
C9orf47-203ENST00000375851 CCDC7Q96M83 1385 aa17.18■□□□□ 0.34
C9orf47-203ENST00000375851 APAF1O14727 1248 aa17.18■□□□□ 0.34
C9orf47-203ENST00000375851 RRBP1Q9P2E9 1410 aaKnown RBP17.17■□□□□ 0.34
C9orf47-203ENST00000375851 SLC4A10Q6U841 1118 aa17.17■□□□□ 0.34
C9orf47-203ENST00000375851 PLIN1O60240 522 aa17.16■□□□□ 0.34
C9orf47-203ENST00000375851 KIAA1211Q6ZU35 1233 aa17.16■□□□□ 0.34
C9orf47-203ENST00000375851 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
C9orf47-203ENST00000375851 ZNF330Q9Y3S2 320 aaPredicted RBP17.16■□□□□ 0.34
C9orf47-203ENST00000375851 STAC3Q96MF2 364 aa17.16■□□□□ 0.34
C9orf47-203ENST00000375851 BCL2L13Q9BXK5 485 aa17.16■□□□□ 0.34
C9orf47-203ENST00000375851 CDK11BP21127 795 aaKnown RBP17.16■□□□□ 0.34
C9orf47-203ENST00000375851 SLKQ9H2G2 1235 aaPredicted RBP17.15■□□□□ 0.34
C9orf47-203ENST00000375851 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
C9orf47-203ENST00000375851 E9PSI1 815 aa17.15■□□□□ 0.34
C9orf47-203ENST00000375851 COG3Q96JB2 828 aa17.15■□□□□ 0.34
C9orf47-203ENST00000375851 ELL2O00472 640 aaPredicted RBP17.15■□□□□ 0.34
C9orf47-203ENST00000375851 GOLGA6L4A6NEF3 574 aa17.14■□□□□ 0.34
C9orf47-203ENST00000375851 HMMRO75330 724 aa17.14■□□□□ 0.33
C9orf47-203ENST00000375851 DNTTIP2Q5QJE6 756 aaKnown RBP17.14■□□□□ 0.33
C9orf47-203ENST00000375851 MFAP1P55081 439 aaKnown RBP17.13■□□□□ 0.33
C9orf47-203ENST00000375851 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
C9orf47-203ENST00000375851 TOP2BQ02880 1626 aa17.13■□□□□ 0.33
C9orf47-203ENST00000375851 RRP1P56182 461 aaKnown RBP17.13■□□□□ 0.33
C9orf47-203ENST00000375851 POLA1P09884 1462 aaPredicted RBP17.12■□□□□ 0.33
C9orf47-203ENST00000375851 FAM69CQ0P6D2 419 aa17.12■□□□□ 0.33
C9orf47-203ENST00000375851 EXOC6Q8TAG9 804 aa17.12■□□□□ 0.33
C9orf47-203ENST00000375851 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
C9orf47-203ENST00000375851 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
C9orf47-203ENST00000375851 WASHC2AQ641Q2 1341 aa17.1■□□□□ 0.33
C9orf47-203ENST00000375851 IPO9Q96P70 1041 aaKnown RBP17.1■□□□□ 0.33
C9orf47-203ENST00000375851 HDAC5Q9UQL6 1122 aa17.1■□□□□ 0.33
C9orf47-203ENST00000375851 PRG4Q92954 1404 aaPredicted RBP17.09■□□□□ 0.33
C9orf47-203ENST00000375851 DEKP35659 375 aaKnown RBP17.09■□□□□ 0.33
C9orf47-203ENST00000375851 SYNJ2O15056 1496 aa17.08■□□□□ 0.32
C9orf47-203ENST00000375851 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.32
C9orf47-203ENST00000375851 CRBNQ96SW2 442 aa17.08■□□□□ 0.32
C9orf47-203ENST00000375851 CENPQQ7L2Z9 268 aaPredicted RBP17.07■□□□□ 0.32
C9orf47-203ENST00000375851 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
C9orf47-203ENST00000375851 MRC2Q9UBG0 1479 aa17.07■□□□□ 0.32
C9orf47-203ENST00000375851 EFCAB5A4FU69 1503 aa17.07■□□□□ 0.32
C9orf47-203ENST00000375851 MIA2Q96PC5 1412 aa17.07■□□□□ 0.32
C9orf47-203ENST00000375851 DIAPH1O60610 1272 aaKnown RBP17.07■□□□□ 0.32
C9orf47-203ENST00000375851 NGEFQ8N5V2 710 aa17.07■□□□□ 0.32
C9orf47-203ENST00000375851 CNTLNQ9NXG0 1405 aa17.06■□□□□ 0.32
C9orf47-203ENST00000375851 TRIM6-TRIM34B2RNG4 842 aa17.06■□□□□ 0.32
C9orf47-203ENST00000375851 CC2D2AQ9P2K1 1620 aa17.06■□□□□ 0.32
C9orf47-203ENST00000375851 TMEM132EQ6IEE7 984 aa17.05■□□□□ 0.32
C9orf47-203ENST00000375851 GBP4Q96PP9 640 aa17.05■□□□□ 0.32
C9orf47-203ENST00000375851 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
C9orf47-203ENST00000375851 L1TD1Q5T7N2 865 aaKnown RBP17.04■□□□□ 0.32
C9orf47-203ENST00000375851 CHMP3Q9Y3E7 222 aa17.04■□□□□ 0.32
C9orf47-203ENST00000375851 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
C9orf47-203ENST00000375851 CFAP70Q5T0N1 1121 aa17.04■□□□□ 0.32
C9orf47-203ENST00000375851 PDE4AP27815 886 aa17.03■□□□□ 0.32
C9orf47-203ENST00000375851 TROQ12816 1431 aaPredicted RBP17.02■□□□□ 0.31
C9orf47-203ENST00000375851 RIPK4P57078 832 aa17.02■□□□□ 0.31
C9orf47-203ENST00000375851 GORABQ5T7V8 394 aa17.02■□□□□ 0.31
C9orf47-203ENST00000375851 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
C9orf47-203ENST00000375851 NAP1L5Q96NT1 182 aaPredicted RBP17.01■□□□□ 0.31
C9orf47-203ENST00000375851 NBPF1Q3BBV0 1214 aa17.01■□□□□ 0.31
C9orf47-203ENST00000375851 GPATCH3Q96I76 525 aa17.01■□□□□ 0.31
C9orf47-203ENST00000375851 GZF1Q9H116 711 aaPredicted RBP17.01■□□□□ 0.31
C9orf47-203ENST00000375851 NBPF8Q3BBV2 869 aa17.01■□□□□ 0.31
C9orf47-203ENST00000375851 RUNDC1Q96C34 613 aa17■□□□□ 0.31
C9orf47-203ENST00000375851 HFM1A2PYH4 1435 aa17■□□□□ 0.31
C9orf47-203ENST00000375851 GGNBP2Q9H3C7 697 aa17■□□□□ 0.31
C9orf47-203ENST00000375851 CCDC9Q9Y3X0 531 aaKnown RBP17■□□□□ 0.31
C9orf47-203ENST00000375851 FAM161AQ3B820 660 aa16.99■□□□□ 0.31
C9orf47-203ENST00000375851 ANKRD45Q5TZF3 282 aa16.99■□□□□ 0.31
C9orf47-203ENST00000375851 TEFQ10587 303 aa16.99■□□□□ 0.31
C9orf47-203ENST00000375851 EHBP1L1Q8N3D4 1523 aa16.99■□□□□ 0.31
C9orf47-203ENST00000375851 TAF7LQ5H9L4 462 aa16.99■□□□□ 0.31
C9orf47-203ENST00000375851 CABP2Q9NPB3 220 aa16.99■□□□□ 0.31
C9orf47-203ENST00000375851 C9orf84Q5VXU9 1444 aa16.99■□□□□ 0.31
C9orf47-203ENST00000375851 TIAM1Q13009 1591 aa16.98■□□□□ 0.31
C9orf47-203ENST00000375851 GOLGA6L6A8MZA4 724 aa16.97■□□□□ 0.31
C9orf47-203ENST00000375851 NRDCO43847 1150 aa16.97■□□□□ 0.31
C9orf47-203ENST00000375851 TULP1O00294 542 aaPredicted RBP16.97■□□□□ 0.31
C9orf47-203ENST00000375851 ADAMTS8Q9UP79 889 aa16.96■□□□□ 0.31
C9orf47-203ENST00000375851 SNAPC4Q5SXM2 1469 aa16.96■□□□□ 0.31
C9orf47-203ENST00000375851 KIAA1107Q9UPP5 1409 aa16.96■□□□□ 0.31
C9orf47-203ENST00000375851 C1orf141Q5JVX7 400 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms