RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 ZDHHC16Q969W1 377 aa4.53□□□□□ -1.68
CCDC7-204ENST00000375025 NCAPD3P42695 1498 aa4.53□□□□□ -1.68
CCDC7-204ENST00000375025 LAPTM4BQ86VI4 370 aa4.52□□□□□ -1.69
CCDC7-204ENST00000375025 ADAM33Q9BZ11 813 aa4.52□□□□□ -1.69
CCDC7-204ENST00000375025 PDE4AP27815 886 aa4.52□□□□□ -1.69
CCDC7-204ENST00000375025 WNT2BQ93097 391 aa4.52□□□□□ -1.69
CCDC7-204ENST00000375025 IRX2Q9BZI1 471 aaPredicted RBP4.52□□□□□ -1.69
CCDC7-204ENST00000375025 NBPF3Q9H094 633 aa4.52□□□□□ -1.69
CCDC7-204ENST00000375025 EVI5O60447 810 aa4.52□□□□□ -1.69
CCDC7-204ENST00000375025 NYAP1Q6ZVC0 841 aa4.52□□□□□ -1.69
CCDC7-204ENST00000375025 MRPL50Q8N5N7 158 aaKnown RBP4.52□□□□□ -1.69
CCDC7-204ENST00000375025 RABGEF1Q9UJ41 708 aa4.52□□□□□ -1.69
CCDC7-204ENST00000375025 PTPN5P54829 565 aa4.51□□□□□ -1.69
CCDC7-204ENST00000375025 AMER1Q5JTC6 1135 aaPredicted RBP4.5□□□□□ -1.69
CCDC7-204ENST00000375025 UPF1Q92900 1129 aaKnown RBP eCLIP4.5□□□□□ -1.69
CCDC7-204ENST00000375025 LAMC3Q9Y6N6 1575 aa4.5□□□□□ -1.69
CCDC7-204ENST00000375025 FBXW7Q969H0 707 aa4.49□□□□□ -1.69
CCDC7-204ENST00000375025 PCDHGA10Q9Y5H3 936 aa4.49□□□□□ -1.69
CCDC7-204ENST00000375025 HMGXB3Q12766 1538 aa4.48□□□□□ -1.69
CCDC7-204ENST00000375025 PHF14O94880 888 aa4.48□□□□□ -1.69
CCDC7-204ENST00000375025 WDR62O43379 1518 aa4.48□□□□□ -1.69
CCDC7-204ENST00000375025 SOWAHBA6NEL2 793 aa4.48□□□□□ -1.69
CCDC7-204ENST00000375025 GTPBP6O43824 516 aaPredicted RBP4.48□□□□□ -1.69
CCDC7-204ENST00000375025 EMILIN3Q9NT22 766 aa4.48□□□□□ -1.69
CCDC7-204ENST00000375025 CHGAP10645 457 aaKnown RBP4.47□□□□□ -1.69
CCDC7-204ENST00000375025 CAMK2BQ13554 666 aa4.47□□□□□ -1.69
CCDC7-204ENST00000375025 TYW1BQ6NUM6 668 aa4.47□□□□□ -1.69
CCDC7-204ENST00000375025 GOLGA8CPA6NN73 597 aa4.47□□□□□ -1.69
CCDC7-204ENST00000375025 COL9A1P20849 921 aa4.47□□□□□ -1.69
CCDC7-204ENST00000375025 ANKK1Q8NFD2 765 aa4.47□□□□□ -1.69
CCDC7-204ENST00000375025 ERCC6L2Q5T890 1561 aa4.47□□□□□ -1.69
CCDC7-204ENST00000375025 DDX27Q96GQ7 796 aaKnown RBP4.46□□□□□ -1.69
CCDC7-204ENST00000375025 ARHGEF11O15085 1522 aa4.46□□□□□ -1.69
CCDC7-204ENST00000375025 EPAS1Q99814 870 aa4.45□□□□□ -1.7
CCDC7-204ENST00000375025 PROX2Q3B8N5 592 aa4.44□□□□□ -1.7
CCDC7-204ENST00000375025 MAP3K9P80192 1104 aa4.44□□□□□ -1.7
CCDC7-204ENST00000375025 LAPTM4AQ15012 233 aa4.44□□□□□ -1.7
CCDC7-204ENST00000375025 LARP6Q9BRS8 491 aaKnown RBP4.44□□□□□ -1.7
CCDC7-204ENST00000375025 ZFRQ96KR1 1074 aaKnown RBP4.43□□□□□ -1.7
CCDC7-204ENST00000375025 TRIM6-TRIM34B2RNG4 842 aa4.43□□□□□ -1.7
CCDC7-204ENST00000375025 LCE2BO14633 110 aa4.43□□□□□ -1.7
CCDC7-204ENST00000375025 BCAMP50895 628 aa4.42□□□□□ -1.7
CCDC7-204ENST00000375025 KCNC4Q03721 635 aa4.42□□□□□ -1.7
CCDC7-204ENST00000375025 RSF1Q96T23 1441 aaPredicted RBP4.42□□□□□ -1.7
CCDC7-204ENST00000375025 FAM98CQ17RN3 349 aaKnown RBP4.42□□□□□ -1.7
CCDC7-204ENST00000375025 C6orf132Q5T0Z8 1188 aa4.42□□□□□ -1.7
CCDC7-204ENST00000375025 KIAA1468Q9P260 1216 aa4.42□□□□□ -1.7
CCDC7-204ENST00000375025 MRC2Q9UBG0 1479 aa4.41□□□□□ -1.7
CCDC7-204ENST00000375025 PDS5BQ9NTI5 1447 aa4.41□□□□□ -1.7
CCDC7-204ENST00000375025 WBP1LQ9NX94 342 aa4.41□□□□□ -1.7
CCDC7-204ENST00000375025 TSR3Q9UJK0 312 aaKnown RBP4.41□□□□□ -1.7
CCDC7-204ENST00000375025 RTN4Q9NQC3 1192 aaKnown RBP4.4□□□□□ -1.7
CCDC7-204ENST00000375025 CADPS2Q86UW7 1296 aa4.4□□□□□ -1.71
CCDC7-204ENST00000375025 SOCS7O14512 581 aa4.39□□□□□ -1.71
CCDC7-204ENST00000375025 ARAP1Q96P48 1450 aa4.39□□□□□ -1.71
CCDC7-204ENST00000375025 SMARCA2P51531 1590 aa4.38□□□□□ -1.71
CCDC7-204ENST00000375025 SCRIBQ14160 1630 aa4.38□□□□□ -1.71
CCDC7-204ENST00000375025 TJAP1Q5JTD0 557 aa4.38□□□□□ -1.71
CCDC7-204ENST00000375025 EN1Q05925 392 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-204ENST00000375025 FBXO41Q8TF61 875 aa4.37□□□□□ -1.71
CCDC7-204ENST00000375025 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-204ENST00000375025 ARIH1Q9Y4X5 557 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-204ENST00000375025 KIF21AQ7Z4S6 1674 aa4.37□□□□□ -1.71
CCDC7-204ENST00000375025 NRG2O14511 850 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-204ENST00000375025 PDIA6Q15084 440 aa4.37□□□□□ -1.71
CCDC7-204ENST00000375025 Q6ZNB5 142 aa4.37□□□□□ -1.71
CCDC7-204ENST00000375025 LRCH3Q96II8 777 aa4.37□□□□□ -1.71
CCDC7-204ENST00000375025 HPS5Q9UPZ3 1129 aa4.37□□□□□ -1.71
CCDC7-204ENST00000375025 V9GY48 417 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-204ENST00000375025 TSKSQ9UJT2 592 aa4.36□□□□□ -1.71
CCDC7-204ENST00000375025 DAXXQ9UER7 740 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-204ENST00000375025 SEPT9Q9UHD8 586 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-204ENST00000375025 PEG3Q9GZU2 1588 aa4.36□□□□□ -1.71
CCDC7-204ENST00000375025 ATAD2BQ9ULI0 1458 aa4.35□□□□□ -1.71
CCDC7-204ENST00000375025 NESP48681 1621 aa4.35□□□□□ -1.71
CCDC7-204ENST00000375025 RBM27Q9P2N5 1060 aaKnown RBP4.35□□□□□ -1.71
CCDC7-204ENST00000375025 SPDYE16A6NNV3 312 aaPredicted RBP4.34□□□□□ -1.71
CCDC7-204ENST00000375025 DPYSL4O14531 572 aa4.34□□□□□ -1.71
CCDC7-204ENST00000375025 TRAF7Q6Q0C0 670 aa4.34□□□□□ -1.71
CCDC7-204ENST00000375025 CERKQ8TCT0 537 aa4.34□□□□□ -1.71
CCDC7-204ENST00000375025 PACS2Q86VP3 889 aa4.34□□□□□ -1.72
CCDC7-204ENST00000375025 TTC13Q8NBP0 860 aa4.34□□□□□ -1.72
CCDC7-204ENST00000375025 FAM198AQ9UFP1 575 aa4.34□□□□□ -1.72
CCDC7-204ENST00000375025 IL21Q9HBE4 155 aa4.33□□□□□ -1.72
CCDC7-204ENST00000375025 LMTK3Q96Q04 1460 aa4.32□□□□□ -1.72
CCDC7-204ENST00000375025 PRSS12P56730 875 aa4.32□□□□□ -1.72
CCDC7-204ENST00000375025 GFRA3O60609 400 aa4.32□□□□□ -1.72
CCDC7-204ENST00000375025 ZCCHC6Q5VYS8 1495 aaKnown RBP4.32□□□□□ -1.72
CCDC7-204ENST00000375025 PRIM1P49642 420 aaKnown RBP4.31□□□□□ -1.72
CCDC7-204ENST00000375025 PPP4CP60510 307 aa4.31□□□□□ -1.72
CCDC7-204ENST00000375025 TSR1Q2NL82 804 aaKnown RBP4.31□□□□□ -1.72
CCDC7-204ENST00000375025 CDCA7LQ96GN5 454 aa4.31□□□□□ -1.72
CCDC7-204ENST00000375025 MTRQ99707 1265 aa4.31□□□□□ -1.72
CCDC7-204ENST00000375025 C3orf80F5H4A9 247 aa4.3□□□□□ -1.72
CCDC7-204ENST00000375025 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.3□□□□□ -1.72
CCDC7-204ENST00000375025 PPP1R18Q6NYC8 613 aa4.3□□□□□ -1.72
CCDC7-204ENST00000375025 SAMD7Q7Z3H4 446 aa4.3□□□□□ -1.72
CCDC7-204ENST00000375025 PRKD2Q9BZL6 878 aa4.3□□□□□ -1.72
CCDC7-204ENST00000375025 NECTIN2Q92692 538 aa4.3□□□□□ -1.72
CCDC7-204ENST00000375025 TATDN2Q93075 761 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms