RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 CSPP1Q1MSJ5 1256 aa26.46■■□□□ 1.83
TGFBR1-202ENST00000374994 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.45■■□□□ 1.82
TGFBR1-202ENST00000374994 HDAC5Q9UQL6 1122 aa26.45■■□□□ 1.82
TGFBR1-202ENST00000374994 HNRNPMP52272 730 aaKnown RBP eCLIP26.44■■□□□ 1.829e-7■■□□□ 14.5
TGFBR1-202ENST00000374994 RRBP1Q9P2E9 1410 aaKnown RBP26.44■■□□□ 1.82
TGFBR1-202ENST00000374994 CUX1P39880 1505 aa26.44■■□□□ 1.82
TGFBR1-202ENST00000374994 ST18O60284 1047 aa26.44■■□□□ 1.82
TGFBR1-202ENST00000374994 GGT6Q6P531 493 aa26.43■■□□□ 1.82
TGFBR1-202ENST00000374994 MYOM3Q5VTT5 1437 aa26.43■■□□□ 1.82
TGFBR1-202ENST00000374994 AAMPQ13685 434 aa26.43■■□□□ 1.82
TGFBR1-202ENST00000374994 PHF14O94880 888 aa26.42■■□□□ 1.82
TGFBR1-202ENST00000374994 NAP1L2Q9ULW6 460 aaPredicted RBP26.42■■□□□ 1.82
TGFBR1-202ENST00000374994 APBB1O00213 710 aa26.42■■□□□ 1.82
TGFBR1-202ENST00000374994 IGF1RP08069 1367 aa26.41■■□□□ 1.82
TGFBR1-202ENST00000374994 ZKSCAN2Q63HK3 967 aa26.41■■□□□ 1.82
TGFBR1-202ENST00000374994 STK31Q9BXU1 1019 aa26.41■■□□□ 1.82
TGFBR1-202ENST00000374994 KIF7Q2M1P5 1343 aa26.4■■□□□ 1.82
TGFBR1-202ENST00000374994 PLEKHG5O94827 1062 aa26.4■■□□□ 1.82
TGFBR1-202ENST00000374994 LRRC9Q6ZRR7 1453 aa26.4■■□□□ 1.82
TGFBR1-202ENST00000374994 STK26Q9P289 416 aa26.39■■□□□ 1.82
TGFBR1-202ENST00000374994 PLIN1O60240 522 aa26.39■■□□□ 1.81
TGFBR1-202ENST00000374994 SPAG9O60271 1321 aaKnown RBP26.38■■□□□ 1.81
TGFBR1-202ENST00000374994 MIA2Q96PC5 1412 aa26.37■■□□□ 1.81
TGFBR1-202ENST00000374994 KIF3BO15066 747 aa26.36■■□□□ 1.81
TGFBR1-202ENST00000374994 A0A0G2JS52 829 aa26.35■■□□□ 1.81
TGFBR1-202ENST00000374994 STAC3Q96MF2 364 aa26.35■■□□□ 1.81
TGFBR1-202ENST00000374994 BRD4O60885 1362 aaPredicted RBP26.34■■□□□ 1.81
TGFBR1-202ENST00000374994 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
TGFBR1-202ENST00000374994 HSP90AA2PQ14568 343 aaPredicted RBP26.34■■□□□ 1.81
TGFBR1-202ENST00000374994 SLC4A3P48751 1232 aa26.32■■□□□ 1.8
TGFBR1-202ENST00000374994 GPATCH3Q96I76 525 aa26.31■■□□□ 1.8
TGFBR1-202ENST00000374994 CHMP5Q9NZZ3 219 aa26.31■■□□□ 1.8
TGFBR1-202ENST00000374994 LMOD2Q6P5Q4 547 aa26.29■■□□□ 1.8
TGFBR1-202ENST00000374994 DDX19BQ9UMR2 479 aa26.29■■□□□ 1.8
TGFBR1-202ENST00000374994 WASHC2AQ641Q2 1341 aa26.28■■□□□ 1.8
TGFBR1-202ENST00000374994 COG6Q9Y2V7 657 aa26.28■■□□□ 1.8
TGFBR1-202ENST00000374994 DDX49Q9Y6V7 483 aaKnown RBP26.28■■□□□ 1.8
TGFBR1-202ENST00000374994 CASKIN1Q8WXD9 1431 aa26.28■■□□□ 1.8
TGFBR1-202ENST00000374994 TPM4P67936 248 aa26.28■■□□□ 1.8
TGFBR1-202ENST00000374994 APAF1O14727 1248 aa26.26■■□□□ 1.79
TGFBR1-202ENST00000374994 FANCD2Q9BXW9 1451 aa26.25■■□□□ 1.79
TGFBR1-202ENST00000374994 TRIM6-TRIM34B2RNG4 842 aa26.25■■□□□ 1.79
TGFBR1-202ENST00000374994 JPH4Q96JJ6 628 aa26.25■■□□□ 1.79
TGFBR1-202ENST00000374994 SOX12O15370 315 aa26.25■■□□□ 1.79
TGFBR1-202ENST00000374994 FYCO1Q9BQS8 1478 aa26.24■■□□□ 1.79
TGFBR1-202ENST00000374994 ATP6V1DQ9Y5K8 247 aa26.23■■□□□ 1.79
TGFBR1-202ENST00000374994 GNL2Q13823 731 aaKnown RBP26.23■■□□□ 1.79
TGFBR1-202ENST00000374994 RRP7AQ9Y3A4 280 aaKnown RBP26.22■■□□□ 1.79
TGFBR1-202ENST00000374994 FOXD4L1Q9NU39 408 aa26.22■■□□□ 1.79
TGFBR1-202ENST00000374994 WASHC2CQ9Y4E1 1318 aa26.2■■□□□ 1.78
TGFBR1-202ENST00000374994 ANKRD45Q5TZF3 282 aa26.19■■□□□ 1.78
TGFBR1-202ENST00000374994 NFKBIBQ15653 356 aa26.19■■□□□ 1.78
TGFBR1-202ENST00000374994 DZIP1LQ8IYY4 767 aaKnown RBP26.19■■□□□ 1.78
TGFBR1-202ENST00000374994 KIF3AQ9Y496 699 aa26.19■■□□□ 1.78
TGFBR1-202ENST00000374994 CCDC34Q96HJ3 373 aa26.19■■□□□ 1.78
TGFBR1-202ENST00000374994 FGD5Q6ZNL6 1462 aa26.19■■□□□ 1.78
TGFBR1-202ENST00000374994 EVC2Q86UK5 1308 aa26.18■■□□□ 1.78
TGFBR1-202ENST00000374994 KIF16BQ96L93 1317 aa26.17■■□□□ 1.78
TGFBR1-202ENST00000374994 REC8O95072 547 aa26.17■■□□□ 1.78
TGFBR1-202ENST00000374994 TAOK2Q9UL54 1235 aa26.16■■□□□ 1.78
TGFBR1-202ENST00000374994 TRAK1Q9UPV9 953 aa26.16■■□□□ 1.78
TGFBR1-202ENST00000374994 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
TGFBR1-202ENST00000374994 NCOA2Q15596 1464 aa26.16■■□□□ 1.78
TGFBR1-202ENST00000374994 BCL2L13Q9BXK5 485 aa26.16■■□□□ 1.78
TGFBR1-202ENST00000374994 RUNDC1Q96C34 613 aa26.14■■□□□ 1.78
TGFBR1-202ENST00000374994 CHMP4CQ96CF2 233 aa26.14■■□□□ 1.78
TGFBR1-202ENST00000374994 SLC4A10Q6U841 1118 aa26.13■■□□□ 1.77
TGFBR1-202ENST00000374994 API5Q9BZZ5 524 aaKnown RBP26.13■■□□□ 1.77
TGFBR1-202ENST00000374994 VGFO15240 615 aaPredicted RBP26.12■■□□□ 1.77
TGFBR1-202ENST00000374994 NUCB2P80303 420 aa26.09■■□□□ 1.77
TGFBR1-202ENST00000374994 ANKRD50Q9ULJ7 1429 aa26.09■■□□□ 1.77
TGFBR1-202ENST00000374994 GAPVD1Q14C86 1478 aa26.08■■□□□ 1.77
TGFBR1-202ENST00000374994 ROCK1Q13464 1354 aa26.08■■□□□ 1.77
TGFBR1-202ENST00000374994 SMG6Q86US8 1419 aaKnown RBP26.07■■□□□ 1.76
TGFBR1-202ENST00000374994 MRE11P49959 708 aa26.07■■□□□ 1.76
TGFBR1-202ENST00000374994 MLECQ14165 292 aa26.07■■□□□ 1.76
TGFBR1-202ENST00000374994 C22orf23Q9BZE7 217 aa26.06■■□□□ 1.76
TGFBR1-202ENST00000374994 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.06■■□□□ 1.76
TGFBR1-202ENST00000374994 HSP90B1P14625 803 aaKnown RBP26.06■■□□□ 1.76
TGFBR1-202ENST00000374994 NOL8Q76FK4 1167 aaKnown RBP26.05■■□□□ 1.76
TGFBR1-202ENST00000374994 PRXQ9BXM0 1461 aa26.05■■□□□ 1.76
TGFBR1-202ENST00000374994 PTPRGP23470 1445 aa26.05■■□□□ 1.76
TGFBR1-202ENST00000374994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.05■■□□□ 1.763e-9■■■□□ 18.3
TGFBR1-202ENST00000374994 HFM1A2PYH4 1435 aa26.05■■□□□ 1.76
TGFBR1-202ENST00000374994 ARID3AQ99856 593 aa26.04■■□□□ 1.76
TGFBR1-202ENST00000374994 DIAPH1O60610 1272 aaKnown RBP26.02■■□□□ 1.76
TGFBR1-202ENST00000374994 FAM43AQ8N2R8 423 aa26.01■■□□□ 1.75
TGFBR1-202ENST00000374994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26■■□□□ 1.75
TGFBR1-202ENST00000374994 EFCAB5A4FU69 1503 aa26■■□□□ 1.75
TGFBR1-202ENST00000374994 PDE3AQ14432 1141 aa25.99■■□□□ 1.75
TGFBR1-202ENST00000374994 NCAPD3P42695 1498 aa25.99■■□□□ 1.75
TGFBR1-202ENST00000374994 BACH2Q9BYV9 841 aa25.99■■□□□ 1.75
TGFBR1-202ENST00000374994 COG3Q96JB2 828 aa25.98■■□□□ 1.75
TGFBR1-202ENST00000374994 INTS3Q68E01 1043 aaKnown RBP25.98■■□□□ 1.75
TGFBR1-202ENST00000374994 AMPHP49418 695 aa25.98■■□□□ 1.75
TGFBR1-202ENST00000374994 RUFY2Q8WXA3 655 aa25.98■■□□□ 1.75
TGFBR1-202ENST00000374994 VSIG10Q8N0Z9 540 aa25.98■■□□□ 1.75
TGFBR1-202ENST00000374994 ADAMTS8Q9UP79 889 aa25.97■■□□□ 1.75
TGFBR1-202ENST00000374994 NINLQ9Y2I6 1382 aa25.97■■□□□ 1.75
TGFBR1-202ENST00000374994 RILPL2Q969X0 211 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms