RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 ZNF326Q5BKZ1 582 aaKnown RBP24.39■■□□□ 1.5
PHF1-201ENST00000374512 MAST1Q9Y2H9 1570 aa24.37■■□□□ 1.49
PHF1-201ENST00000374512 ZCCHC11Q5TAX3 1644 aaKnown RBP24.37■■□□□ 1.49
PHF1-201ENST00000374512 KTN1Q86UP2 1357 aaKnown RBP24.37■■□□□ 1.49
PHF1-201ENST00000374512 SYCP2Q9BX26 1530 aa24.36■■□□□ 1.49
PHF1-201ENST00000374512 PLEKHH2Q8IVE3 1493 aa24.35■■□□□ 1.49
PHF1-201ENST00000374512 FAM135AQ9P2D6 1515 aa24.33■■□□□ 1.49
PHF1-201ENST00000374512 RNF123Q5XPI4 1314 aa24.33■■□□□ 1.49
PHF1-201ENST00000374512 NUDCQ9Y266 331 aa24.33■■□□□ 1.48
PHF1-201ENST00000374512 MSH5O43196 834 aa24.32■■□□□ 1.48
PHF1-201ENST00000374512 CARD11Q9BXL7 1154 aa24.29■■□□□ 1.48
PHF1-201ENST00000374512 PNISRQ8TF01 805 aaKnown RBP24.27■■□□□ 1.48
PHF1-201ENST00000374512 PLCH2O75038 1416 aa24.27■■□□□ 1.48
PHF1-201ENST00000374512 PLXNC1O60486 1568 aa24.27■■□□□ 1.48
PHF1-201ENST00000374512 UNC13BO14795 1591 aa24.27■■□□□ 1.48
PHF1-201ENST00000374512 B4GALNT3Q6L9W6 998 aa24.26■■□□□ 1.47
PHF1-201ENST00000374512 BRD4O60885 1362 aaPredicted RBP24.24■■□□□ 1.47
PHF1-201ENST00000374512 RALBP1Q15311 655 aa24.24■■□□□ 1.47
PHF1-201ENST00000374512 DCAF11Q8TEB1 546 aa24.23■■□□□ 1.47
PHF1-201ENST00000374512 POLR3GLQ9BT43 218 aa24.23■■□□□ 1.47
PHF1-201ENST00000374512 TMC1Q8TDI8 760 aa24.23■■□□□ 1.47
PHF1-201ENST00000374512 KDM2AQ9Y2K7 1162 aa24.23■■□□□ 1.47
PHF1-201ENST00000374512 E9PCH4 1651 aa24.23■■□□□ 1.47
PHF1-201ENST00000374512 LRPPRCP42704 1394 aaKnown RBP24.22■■□□□ 1.47
PHF1-201ENST00000374512 EFCAB2Q5VUJ9 269 aa24.21■■□□□ 1.47
PHF1-201ENST00000374512 CCDC144AA2RUR9 1427 aa24.21■■□□□ 1.47
PHF1-201ENST00000374512 ERICH6Q7L0X2 663 aa24.2■■□□□ 1.47
PHF1-201ENST00000374512 MYBBP1AQ9BQG0 1328 aaKnown RBP24.2■■□□□ 1.46
PHF1-201ENST00000374512 IQGAP3Q86VI3 1631 aa24.18■■□□□ 1.46
PHF1-201ENST00000374512 ABCC1P33527 1531 aa24.18■■□□□ 1.46
PHF1-201ENST00000374512 DUOX2Q9NRD8 1548 aa24.18■■□□□ 1.46
PHF1-201ENST00000374512 ST20-MTHFSA0A0A6YYL1 179 aa24.17■■□□□ 1.46
PHF1-201ENST00000374512 ARAP3Q8WWN8 1544 aa24.17■■□□□ 1.46
PHF1-201ENST00000374512 TRPM1Q7Z4N2 1603 aa24.15■■□□□ 1.46
PHF1-201ENST00000374512 PRAG1Q86YV5 1406 aa24.14■■□□□ 1.45
PHF1-201ENST00000374512 MYT1LQ9UL68 1186 aa24.14■■□□□ 1.45
PHF1-201ENST00000374512 LAMC1P11047 1609 aa24.13■■□□□ 1.45
PHF1-201ENST00000374512 ERBINQ96RT1 1412 aa24.13■■□□□ 1.45
PHF1-201ENST00000374512 PLA2R1Q13018 1463 aa24.12■■□□□ 1.45
PHF1-201ENST00000374512 MAGI2Q86UL8 1455 aa24.11■■□□□ 1.45
PHF1-201ENST00000374512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.11■■□□□ 1.456e-7■■■□□ 15
PHF1-201ENST00000374512 WDR7Q9Y4E6 1490 aa24.1■■□□□ 1.45
PHF1-201ENST00000374512 GPRASP1Q5JY77 1395 aa24.1■■□□□ 1.45
PHF1-201ENST00000374512 CCDC136Q96JN2 1154 aa24.1■■□□□ 1.45
PHF1-201ENST00000374512 WASHC2CQ9Y4E1 1318 aa24.09■■□□□ 1.45
PHF1-201ENST00000374512 TRAPPC8Q9Y2L5 1435 aa24.08■■□□□ 1.45
PHF1-201ENST00000374512 CNGB1Q14028 1251 aaPredicted RBP24.08■■□□□ 1.45
PHF1-201ENST00000374512 A2MP01023 1474 aa24.07■■□□□ 1.44
PHF1-201ENST00000374512 INSRP06213 1382 aa24.07■■□□□ 1.44
PHF1-201ENST00000374512 PARD3Q8TEW0 1356 aa24.07■■□□□ 1.44
PHF1-201ENST00000374512 ATP10AO60312 1499 aa24.07■■□□□ 1.44
PHF1-201ENST00000374512 NLRP13Q86W25 1043 aa24.07■■□□□ 1.44
PHF1-201ENST00000374512 PDE3BQ13370 1112 aa24.06■■□□□ 1.44
PHF1-201ENST00000374512 ZMYM4Q5VZL5 1548 aa24.05■■□□□ 1.44
PHF1-201ENST00000374512 RTEL1-TNFRSF6BF6WH68 1400 aa24.05■■□□□ 1.44
PHF1-201ENST00000374512 RGL3Q3MIN7 710 aa24.04■■□□□ 1.44
PHF1-201ENST00000374512 EIF2AK4Q9P2K8 1649 aaKnown RBP24.04■■□□□ 1.44
PHF1-201ENST00000374512 ABCA9Q8IUA7 1624 aa24.03■■□□□ 1.44
PHF1-201ENST00000374512 PRDM15P57071 1507 aaPredicted RBP24.02■■□□□ 1.44
PHF1-201ENST00000374512 SPAG9O60271 1321 aaKnown RBP24.01■■□□□ 1.43
PHF1-201ENST00000374512 COL17A1Q9UMD9 1497 aaPredicted RBP24■■□□□ 1.43
PHF1-201ENST00000374512 ZFYVE16Q7Z3T8 1539 aa24■■□□□ 1.43
PHF1-201ENST00000374512 NBPF1Q3BBV0 1214 aa23.98■■□□□ 1.43
PHF1-201ENST00000374512 PER1O15534 1290 aaPredicted RBP23.98■■□□□ 1.43
PHF1-201ENST00000374512 FANCAO15360 1455 aa23.97■■□□□ 1.43
PHF1-201ENST00000374512 RRP1P56182 461 aaKnown RBP23.96■■□□□ 1.43
PHF1-201ENST00000374512 AFAP1Q8N556 730 aa23.95■■□□□ 1.42
PHF1-201ENST00000374512 NOP58Q9Y2X3 529 aaKnown RBP23.95■■□□□ 1.42
PHF1-201ENST00000374512 ASXL2Q76L83 1435 aa23.94■■□□□ 1.42
PHF1-201ENST00000374512 OSCARQ8IYS5 282 aa23.94■■□□□ 1.42
PHF1-201ENST00000374512 INO80Q9ULG1 1556 aaPredicted RBP23.93■■□□□ 1.42
PHF1-201ENST00000374512 RCAN3Q9UKA8 241 aa23.92■■□□□ 1.42
PHF1-201ENST00000374512 BCL11AQ9H165 835 aa23.91■■□□□ 1.42
PHF1-201ENST00000374512 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
PHF1-201ENST00000374512 ANP32AP39687 249 aaKnown RBP23.91■■□□□ 1.42
PHF1-201ENST00000374512 TESK2Q96S53 571 aa23.91■■□□□ 1.42
PHF1-201ENST00000374512 DEPDC5O75140 1603 aa23.91■■□□□ 1.42
PHF1-201ENST00000374512 RNF17Q9BXT8 1623 aaKnown RBP23.9■■□□□ 1.42
PHF1-201ENST00000374512 ADGRL1O94910 1474 aa23.89■■□□□ 1.41
PHF1-201ENST00000374512 BLMP54132 1417 aaPredicted RBP23.88■■□□□ 1.41
PHF1-201ENST00000374512 TMF1P82094 1093 aa23.87■■□□□ 1.41
PHF1-201ENST00000374512 SCAPERQ9BY12 1400 aa23.87■■□□□ 1.41
PHF1-201ENST00000374512 DISP3Q9P2K9 1392 aa23.86■■□□□ 1.41
PHF1-201ENST00000374512 IPO9Q96P70 1041 aaKnown RBP23.86■■□□□ 1.41
PHF1-201ENST00000374512 TRPM2O94759 1503 aa23.86■■□□□ 1.41
PHF1-201ENST00000374512 TCERG1O14776 1098 aaKnown RBP23.85■■□□□ 1.41
PHF1-201ENST00000374512 SPHKAPQ2M3C7 1700 aa23.85■■□□□ 1.41
PHF1-201ENST00000374512 CEP152O94986 1710 aa23.84■■□□□ 1.41
PHF1-201ENST00000374512 NPM1P06748 294 aaKnown RBP eCLIP23.84■■□□□ 1.41
PHF1-201ENST00000374512 STAC3Q96MF2 364 aa23.83■■□□□ 1.41
PHF1-201ENST00000374512 MADDQ8WXG6 1647 aa23.83■■□□□ 1.41
PHF1-201ENST00000374512 TET3O43151 1660 aa23.83■■□□□ 1.41
PHF1-201ENST00000374512 PTPRTO14522 1441 aa23.81■■□□□ 1.4
PHF1-201ENST00000374512 VWDEQ8N2E2 1590 aa23.81■■□□□ 1.4
PHF1-201ENST00000374512 PANK3Q9H999 370 aa23.8■■□□□ 1.4
PHF1-201ENST00000374512 KANK1Q14678 1352 aa23.8■■□□□ 1.4
PHF1-201ENST00000374512 EXOC6Q8TAG9 804 aa23.8■■□□□ 1.4
PHF1-201ENST00000374512 MS4A1P11836 297 aa23.79■■□□□ 1.4
PHF1-201ENST00000374512 IQGAP1P46940 1657 aa23.78■■□□□ 1.4
PHF1-201ENST00000374512 SENP3-EIF4A1A0A087X0R7 540 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms