RNA–Protein interactions for RNA: ENST00000374264.6

SUSD1-203, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUSD1, Length 2,754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-203ENST00000374264 ST20-MTHFSA0A0A6YYL1 179 aa28.27■■■□□ 2.12
SUSD1-203ENST00000374264 PLA2R1Q13018 1463 aa28.26■■■□□ 2.11
SUSD1-203ENST00000374264 ADGRL1O94910 1474 aa28.25■■■□□ 2.11
SUSD1-203ENST00000374264 DUOX2Q9NRD8 1548 aa28.25■■■□□ 2.11
SUSD1-203ENST00000374264 MAST1Q9Y2H9 1570 aa28.24■■■□□ 2.11
SUSD1-203ENST00000374264 CCER2I3L3R5 266 aa28.24■■■□□ 2.11
SUSD1-203ENST00000374264 ROCK2O75116 1388 aaKnown RBP28.2■■■□□ 2.1
SUSD1-203ENST00000374264 PLXNC1O60486 1568 aa28.2■■■□□ 2.1
SUSD1-203ENST00000374264 CNTLNQ9NXG0 1405 aa28.18■■■□□ 2.1
SUSD1-203ENST00000374264 RAPGEF3O95398 923 aa28.17■■■□□ 2.1
SUSD1-203ENST00000374264 SENP3-EIF4A1A0A087X0R7 540 aa28.17■■■□□ 2.1
SUSD1-203ENST00000374264 ERBINQ96RT1 1412 aa28.17■■■□□ 2.1
SUSD1-203ENST00000374264 FAM9BQ8IZU0 186 aa28.16■■■□□ 2.1
SUSD1-203ENST00000374264 CD109Q6YHK3 1445 aa28.15■■■□□ 2.1
SUSD1-203ENST00000374264 PRKRIP1Q9H875 184 aaPredicted RBP28.15■■■□□ 2.1
SUSD1-203ENST00000374264 UNC13BO14795 1591 aa28.15■■■□□ 2.1
SUSD1-203ENST00000374264 ZFYVE16Q7Z3T8 1539 aa28.14■■■□□ 2.09
SUSD1-203ENST00000374264 HNRNPUQ00839 825 aaKnown RBP eCLIP28.14■■■□□ 2.09
SUSD1-203ENST00000374264 GGT6Q6P531 493 aa28.13■■■□□ 2.09
SUSD1-203ENST00000374264 ABCA9Q8IUA7 1624 aa28.13■■■□□ 2.09
SUSD1-203ENST00000374264 BCORL1Q5H9F3 1711 aa28.12■■■□□ 2.09
SUSD1-203ENST00000374264 ATP7AQ04656 1500 aa28.09■■■□□ 2.09
SUSD1-203ENST00000374264 MRS2Q9HD23 443 aa28.09■■■□□ 2.09
SUSD1-203ENST00000374264 IQGAP3Q86VI3 1631 aa28.08■■■□□ 2.09
SUSD1-203ENST00000374264 UHRF1BP1Q6BDS2 1440 aa28.08■■■□□ 2.09
SUSD1-203ENST00000374264 A2MP01023 1474 aa28.07■■■□□ 2.08
SUSD1-203ENST00000374264 RALGAPBQ86X10 1494 aa28.07■■■□□ 2.08
SUSD1-203ENST00000374264 RTEL1-TNFRSF6BF6WH68 1400 aa28.05■■■□□ 2.08
SUSD1-203ENST00000374264 SENP3Q9H4L4 574 aaPredicted RBP28.05■■■□□ 2.08
SUSD1-203ENST00000374264 KDM5CP41229 1560 aa28.05■■■□□ 2.08
SUSD1-203ENST00000374264 BCANQ96GW7 911 aa28.05■■■□□ 2.08
SUSD1-203ENST00000374264 PRAG1Q86YV5 1406 aa28.04■■■□□ 2.08
SUSD1-203ENST00000374264 CHGAP10645 457 aaKnown RBP28.04■■■□□ 2.08
SUSD1-203ENST00000374264 CFAP65Q6ZU64 1925 aaKnown RBP28.03■■■□□ 2.08
SUSD1-203ENST00000374264 ARAP3Q8WWN8 1544 aa28.02■■■□□ 2.08
SUSD1-203ENST00000374264 DHX29Q7Z478 1369 aaKnown RBP28.01■■■□□ 2.07
SUSD1-203ENST00000374264 KANK1Q14678 1352 aa28■■■□□ 2.07
SUSD1-203ENST00000374264 SUPT16HQ9Y5B9 1047 aaKnown RBP28■■■□□ 2.07
SUSD1-203ENST00000374264 MAGI2Q86UL8 1455 aa27.99■■■□□ 2.07
SUSD1-203ENST00000374264 E9PCH4 1651 aa27.97■■■□□ 2.07
SUSD1-203ENST00000374264 ATP10AO60312 1499 aa27.94■■■□□ 2.06
SUSD1-203ENST00000374264 INO80Q9ULG1 1556 aaPredicted RBP27.94■■■□□ 2.06
SUSD1-203ENST00000374264 UGGT1Q9NYU2 1555 aa27.93■■■□□ 2.06
SUSD1-203ENST00000374264 ZNF518AQ6AHZ1 1483 aa27.92■■■□□ 2.06
SUSD1-203ENST00000374264 FKBP8Q14318 412 aa27.92■■■□□ 2.06
SUSD1-203ENST00000374264 KIDINS220Q9ULH0 1771 aa27.92■■■□□ 2.06
SUSD1-203ENST00000374264 FAM69CQ0P6D2 419 aa27.92■■■□□ 2.06
SUSD1-203ENST00000374264 NUTM2DQ5VT03 806 aaPredicted RBP27.88■■■□□ 2.05
SUSD1-203ENST00000374264 WASHC2CQ9Y4E1 1318 aa27.88■■■□□ 2.05
SUSD1-203ENST00000374264 TRPM1Q7Z4N2 1603 aa27.87■■■□□ 2.05
SUSD1-203ENST00000374264 POGZQ7Z3K3 1410 aa27.85■■■□□ 2.05
SUSD1-203ENST00000374264 DISP3Q9P2K9 1392 aa27.84■■■□□ 2.05
SUSD1-203ENST00000374264 POLR1AO95602 1720 aaPredicted RBP27.84■■■□□ 2.05
SUSD1-203ENST00000374264 TESK2Q96S53 571 aa27.83■■■□□ 2.05
SUSD1-203ENST00000374264 IRX6P78412 446 aaPredicted RBP27.83■■■□□ 2.05
SUSD1-203ENST00000374264 CFAP70Q5T0N1 1121 aa27.83■■■□□ 2.05
SUSD1-203ENST00000374264 CLTCL1P53675 1640 aa27.82■■■□□ 2.04
SUSD1-203ENST00000374264 CC2D1BQ5T0F9 858 aaKnown RBP27.81■■■□□ 2.04
SUSD1-203ENST00000374264 ADGRF5Q8IZF2 1346 aa27.81■■■□□ 2.04
SUSD1-203ENST00000374264 SPHKAPQ2M3C7 1700 aa27.79■■■□□ 2.04
SUSD1-203ENST00000374264 DEPDC5O75140 1603 aa27.78■■■□□ 2.04
SUSD1-203ENST00000374264 MROH1Q8NDA8 1641 aa27.78■■■□□ 2.04
SUSD1-203ENST00000374264 TMC1Q8TDI8 760 aa27.78■■■□□ 2.04
SUSD1-203ENST00000374264 PTPRTO14522 1441 aa27.77■■■□□ 2.04
SUSD1-203ENST00000374264 TRPM2O94759 1503 aa27.77■■■□□ 2.04
SUSD1-203ENST00000374264 ARID4BQ4LE39 1312 aaPredicted RBP27.77■■■□□ 2.04
SUSD1-203ENST00000374264 TET3O43151 1660 aa27.76■■■□□ 2.03
SUSD1-203ENST00000374264 PANK3Q9H999 370 aa27.76■■■□□ 2.03
SUSD1-203ENST00000374264 PRDM15P57071 1507 aaPredicted RBP27.75■■■□□ 2.03
SUSD1-203ENST00000374264 TMF1P82094 1093 aa27.74■■■□□ 2.03
SUSD1-203ENST00000374264 GPRASP1Q5JY77 1395 aa27.74■■■□□ 2.03
SUSD1-203ENST00000374264 CEP152O94986 1710 aa27.74■■■□□ 2.03
SUSD1-203ENST00000374264 YEATS2Q9ULM3 1422 aa27.73■■■□□ 2.03
SUSD1-203ENST00000374264 RIMBP3CA6NJZ7 1639 aa27.73■■■□□ 2.03
SUSD1-203ENST00000374264 RIMBP3BA6NNM3 1639 aa27.73■■■□□ 2.03
SUSD1-203ENST00000374264 RIMBP3Q9UFD9 1639 aa27.73■■■□□ 2.03
SUSD1-203ENST00000374264 TSPOAP1O95153 1857 aa27.73■■■□□ 2.03
SUSD1-203ENST00000374264 SALL2Q9Y467 1007 aaPredicted RBP27.72■■■□□ 2.03
SUSD1-203ENST00000374264 NEFLP07196 543 aa27.71■■■□□ 2.03
SUSD1-203ENST00000374264 FRMPD1Q5SYB0 1578 aa27.7■■■□□ 2.03
SUSD1-203ENST00000374264 VWDEQ8N2E2 1590 aa27.69■■■□□ 2.02
SUSD1-203ENST00000374264 PPRC1Q5VV67 1664 aaKnown RBP27.69■■■□□ 2.02
SUSD1-203ENST00000374264 MLECQ14165 292 aa27.69■■■□□ 2.02
SUSD1-203ENST00000374264 MLH3Q9UHC1 1453 aa27.69■■■□□ 2.02
SUSD1-203ENST00000374264 HECW2Q9P2P5 1572 aa27.69■■■□□ 2.02
SUSD1-203ENST00000374264 NPATQ14207 1427 aa27.69■■■□□ 2.02
SUSD1-203ENST00000374264 ABCA6Q8N139 1617 aa27.68■■■□□ 2.02
SUSD1-203ENST00000374264 TMEM132EQ6IEE7 984 aa27.68■■■□□ 2.02
SUSD1-203ENST00000374264 EFCAB6Q5THR3 1501 aa27.65■■■□□ 2.02
SUSD1-203ENST00000374264 PER1O15534 1290 aaPredicted RBP27.64■■■□□ 2.02
SUSD1-203ENST00000374264 EIF2AK4Q9P2K8 1649 aaKnown RBP27.64■■■□□ 2.02
SUSD1-203ENST00000374264 MADDQ8WXG6 1647 aa27.63■■■□□ 2.01
SUSD1-203ENST00000374264 TRAK1Q9UPV9 953 aa27.63■■■□□ 2.01
SUSD1-203ENST00000374264 NEO1Q92859 1461 aa27.63■■■□□ 2.01
SUSD1-203ENST00000374264 CFAP74Q9C0B2 1584 aa27.63■■■□□ 2.01
SUSD1-203ENST00000374264 NOS1P29475 1434 aa27.62■■■□□ 2.01
SUSD1-203ENST00000374264 PNISRQ8TF01 805 aaKnown RBP27.61■■■□□ 2.01
SUSD1-203ENST00000374264 COL17A1Q9UMD9 1497 aaPredicted RBP27.6■■■□□ 2.01
SUSD1-203ENST00000374264 FBXO31Q5XUX0 539 aaPredicted RBP27.6■■■□□ 2.01
SUSD1-203ENST00000374264 RNF17Q9BXT8 1623 aaKnown RBP27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms