RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 RICTORQ6R327 1708 aa18.06■□□□□ 0.48
PRPF4-202ENST00000374199 LMTK2Q8IWU2 1503 aa18.06■□□□□ 0.48
PRPF4-202ENST00000374199 ZNF518AQ6AHZ1 1483 aa18.06■□□□□ 0.48
PRPF4-202ENST00000374199 MLH3Q9UHC1 1453 aa18.05■□□□□ 0.48
PRPF4-202ENST00000374199 FRMPD1Q5SYB0 1578 aa18.05■□□□□ 0.48
PRPF4-202ENST00000374199 CEP152O94986 1710 aa18.05■□□□□ 0.48
PRPF4-202ENST00000374199 POGZQ7Z3K3 1410 aa18.05■□□□□ 0.48
PRPF4-202ENST00000374199 SPHKAPQ2M3C7 1700 aa18.05■□□□□ 0.48
PRPF4-202ENST00000374199 HECW2Q9P2P5 1572 aa18.04■□□□□ 0.48
PRPF4-202ENST00000374199 TRPM2O94759 1503 aa18.04■□□□□ 0.48
PRPF4-202ENST00000374199 RALGAPBQ86X10 1494 aa18.04■□□□□ 0.48
PRPF4-202ENST00000374199 L3MBTL2Q969R5 705 aa18.04■□□□□ 0.48
PRPF4-202ENST00000374199 FOXD1Q16676 465 aa18.03■□□□□ 0.48
PRPF4-202ENST00000374199 PPRC1Q5VV67 1664 aaKnown RBP18.03■□□□□ 0.48
PRPF4-202ENST00000374199 KCNH8Q96L42 1107 aa18.03■□□□□ 0.48
PRPF4-202ENST00000374199 PTPRTO14522 1441 aa18.03■□□□□ 0.48
PRPF4-202ENST00000374199 TRPM1Q7Z4N2 1603 aa18.03■□□□□ 0.48
PRPF4-202ENST00000374199 PKD2Q13563 968 aa18.02■□□□□ 0.47
PRPF4-202ENST00000374199 MIER1Q8N108 512 aa18.01■□□□□ 0.47
PRPF4-202ENST00000374199 DIP2BQ9P265 1576 aa18.01■□□□□ 0.47
PRPF4-202ENST00000374199 ABCA6Q8N139 1617 aa18■□□□□ 0.47
PRPF4-202ENST00000374199 SCAPERQ9BY12 1400 aa17.99■□□□□ 0.47
PRPF4-202ENST00000374199 CD109Q6YHK3 1445 aa17.98■□□□□ 0.47
PRPF4-202ENST00000374199 ZMYM4Q5VZL5 1548 aa17.98■□□□□ 0.47
PRPF4-202ENST00000374199 DHX29Q7Z478 1369 aaKnown RBP17.97■□□□□ 0.47
PRPF4-202ENST00000374199 EFCAB6Q5THR3 1501 aa17.96■□□□□ 0.47
PRPF4-202ENST00000374199 NBPF8Q3BBV2 869 aa17.96■□□□□ 0.47
PRPF4-202ENST00000374199 IFT172Q9UG01 1749 aa17.95■□□□□ 0.46
PRPF4-202ENST00000374199 SPAG9O60271 1321 aaKnown RBP17.95■□□□□ 0.46
PRPF4-202ENST00000374199 CLTCL1P53675 1640 aa17.94■□□□□ 0.46
PRPF4-202ENST00000374199 DIP2CQ9Y2E4 1556 aa17.94■□□□□ 0.46
PRPF4-202ENST00000374199 REREQ9P2R6 1566 aa17.92■□□□□ 0.46
PRPF4-202ENST00000374199 A2MP01023 1474 aa17.92■□□□□ 0.46
PRPF4-202ENST00000374199 ZC3H13Q5T200 1668 aaKnown RBP17.91■□□□□ 0.46
PRPF4-202ENST00000374199 KIAA1210Q9ULL0 1709 aa17.91■□□□□ 0.46
PRPF4-202ENST00000374199 AFAP1Q8N556 730 aa17.91■□□□□ 0.46
PRPF4-202ENST00000374199 PRAG1Q86YV5 1406 aa17.9■□□□□ 0.46
PRPF4-202ENST00000374199 MADDQ8WXG6 1647 aa17.9■□□□□ 0.46
PRPF4-202ENST00000374199 GPRASP1Q5JY77 1395 aa17.9■□□□□ 0.46
PRPF4-202ENST00000374199 CCDC144AA2RUR9 1427 aa17.88■□□□□ 0.45
PRPF4-202ENST00000374199 KIF13AQ9H1H9 1805 aa17.88■□□□□ 0.45
PRPF4-202ENST00000374199 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
PRPF4-202ENST00000374199 HSPA5P11021 654 aaKnown RBP17.86■□□□□ 0.45
PRPF4-202ENST00000374199 PIK3C2BO00750 1634 aa17.85■□□□□ 0.45
PRPF4-202ENST00000374199 WASHC2AQ641Q2 1341 aa17.85■□□□□ 0.45
PRPF4-202ENST00000374199 IQGAP1P46940 1657 aa17.85■□□□□ 0.45
PRPF4-202ENST00000374199 CAMSAP1Q5T5Y3 1602 aa17.84■□□□□ 0.45
PRPF4-202ENST00000374199 EIF4G2P78344 907 aaKnown RBP eCLIP17.83■□□□□ 0.44
PRPF4-202ENST00000374199 ABCC3O15438 1527 aa17.82■□□□□ 0.44
PRPF4-202ENST00000374199 MROH2AA6NES4 1674 aa17.82■□□□□ 0.44
PRPF4-202ENST00000374199 CCDC7Q96M83 1385 aa17.81■□□□□ 0.44
PRPF4-202ENST00000374199 ARID4BQ4LE39 1312 aaPredicted RBP17.81■□□□□ 0.44
PRPF4-202ENST00000374199 NRXN1Q9ULB1 1477 aa17.81■□□□□ 0.44
PRPF4-202ENST00000374199 SIGLEC1Q9BZZ2 1709 aa17.81■□□□□ 0.44
PRPF4-202ENST00000374199 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
PRPF4-202ENST00000374199 KIF1BO60333 1816 aa17.81■□□□□ 0.44
PRPF4-202ENST00000374199 ADGRB3O60242 1522 aa17.8■□□□□ 0.44
PRPF4-202ENST00000374199 MYOM2P54296 1465 aa17.8■□□□□ 0.44
PRPF4-202ENST00000374199 USP47Q96K76 1375 aa17.77■□□□□ 0.44
PRPF4-202ENST00000374199 ARHGAP31Q2M1Z3 1444 aa17.77■□□□□ 0.43
PRPF4-202ENST00000374199 AGLP35573 1532 aa17.77■□□□□ 0.43
PRPF4-202ENST00000374199 CCER2I3L3R5 266 aa17.76■□□□□ 0.43
PRPF4-202ENST00000374199 PPLO60437 1756 aa17.76■□□□□ 0.43
PRPF4-202ENST00000374199 KANK1Q14678 1352 aa17.75■□□□□ 0.43
PRPF4-202ENST00000374199 C11orf95C9JLR9 678 aaPredicted RBP17.75■□□□□ 0.43
PRPF4-202ENST00000374199 STAC3Q96MF2 364 aa17.75■□□□□ 0.43
PRPF4-202ENST00000374199 DDX10Q13206 875 aaKnown RBP17.74■□□□□ 0.43
PRPF4-202ENST00000374199 MYO3AQ8NEV4 1616 aa17.73■□□□□ 0.43
PRPF4-202ENST00000374199 NOS1P29475 1434 aa17.73■□□□□ 0.43
PRPF4-202ENST00000374199 SYNMO15061 1565 aa17.72■□□□□ 0.43
PRPF4-202ENST00000374199 NPATQ14207 1427 aa17.72■□□□□ 0.43
PRPF4-202ENST00000374199 HIRIP3Q9BW71 556 aaPredicted RBP17.71■□□□□ 0.43
PRPF4-202ENST00000374199 KIF7Q2M1P5 1343 aa17.71■□□□□ 0.43
PRPF4-202ENST00000374199 SETBP1Q9Y6X0 1596 aa17.7■□□□□ 0.42
PRPF4-202ENST00000374199 UGGT1Q9NYU2 1555 aa17.69■□□□□ 0.42
PRPF4-202ENST00000374199 CENPBP07199 599 aaPredicted RBP17.68■□□□□ 0.42
PRPF4-202ENST00000374199 ARHGEF40Q8TER5 1519 aa17.68■□□□□ 0.42
PRPF4-202ENST00000374199 COL17A1Q9UMD9 1497 aaPredicted RBP17.67■□□□□ 0.42
PRPF4-202ENST00000374199 PREX1Q8TCU6 1659 aa17.67■□□□□ 0.42
PRPF4-202ENST00000374199 YEATS2Q9ULM3 1422 aa17.67■□□□□ 0.42
PRPF4-202ENST00000374199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.423e-6■■■□□ 14.8
PRPF4-202ENST00000374199 KIF3BO15066 747 aa17.65■□□□□ 0.42
PRPF4-202ENST00000374199 CYB5RLQ6IPT4 315 aa17.65■□□□□ 0.42
PRPF4-202ENST00000374199 DCAF11Q8TEB1 546 aa17.65■□□□□ 0.42
PRPF4-202ENST00000374199 ROCK2O75116 1388 aaKnown RBP17.65■□□□□ 0.42
PRPF4-202ENST00000374199 TSPOAP1O95153 1857 aa17.64■□□□□ 0.41
PRPF4-202ENST00000374199 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
PRPF4-202ENST00000374199 MYOM1P52179 1685 aa17.61■□□□□ 0.41
PRPF4-202ENST00000374199 NEXMIFQ5QGS0 1516 aa17.6■□□□□ 0.41
PRPF4-202ENST00000374199 TMEM131LA2VDJ0 1609 aa17.6■□□□□ 0.41
PRPF4-202ENST00000374199 ADGRB1O14514 1584 aa17.59■□□□□ 0.41
PRPF4-202ENST00000374199 RAPGEF3O95398 923 aa17.58■□□□□ 0.41
PRPF4-202ENST00000374199 ANP32CO43423 234 aa17.58■□□□□ 0.4
PRPF4-202ENST00000374199 PIK3C2GO75747 1445 aa17.58■□□□□ 0.4
PRPF4-202ENST00000374199 SCAF11Q99590 1463 aaKnown RBP17.58■□□□□ 0.4
PRPF4-202ENST00000374199 TESK2Q96S53 571 aa17.57■□□□□ 0.4
PRPF4-202ENST00000374199 CARD11Q9BXL7 1154 aa17.57■□□□□ 0.4
PRPF4-202ENST00000374199 SPATA31D1Q6ZQQ2 1576 aa17.56■□□□□ 0.4
PRPF4-202ENST00000374199 ZFYVE9O95405 1425 aa17.56■□□□□ 0.4
PRPF4-202ENST00000374199 KDM5AP29375 1690 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms