RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 CARMIL2Q6F5E8 1435 aa10.21□□□□□ -0.78
GARNL3-202ENST00000373387 INSRP06213 1382 aa10.2□□□□□ -0.78
GARNL3-202ENST00000373387 KIF15Q9NS87 1388 aa10.2□□□□□ -0.78
GARNL3-202ENST00000373387 PRAG1Q86YV5 1406 aa10.2□□□□□ -0.78
GARNL3-202ENST00000373387 PLA2R1Q13018 1463 aa10.2□□□□□ -0.78
GARNL3-202ENST00000373387 PARD3Q8TEW0 1356 aa10.2□□□□□ -0.78
GARNL3-202ENST00000373387 ATP10AO60312 1499 aa10.19□□□□□ -0.78
GARNL3-202ENST00000373387 EIF2AK4Q9P2K8 1649 aaKnown RBP10.19□□□□□ -0.78
GARNL3-202ENST00000373387 TTC37Q6PGP7 1564 aa10.19□□□□□ -0.78
GARNL3-202ENST00000373387 CCDC141Q6ZP82 1450 aa10.19□□□□□ -0.78
GARNL3-202ENST00000373387 COL17A1Q9UMD9 1497 aaPredicted RBP10.19□□□□□ -0.78
GARNL3-202ENST00000373387 IQGAP1P46940 1657 aa10.18□□□□□ -0.78
GARNL3-202ENST00000373387 A2MP01023 1474 aa10.17□□□□□ -0.78
GARNL3-202ENST00000373387 NUP155O75694 1391 aa10.17□□□□□ -0.78
GARNL3-202ENST00000373387 BLMP54132 1417 aaPredicted RBP10.16□□□□□ -0.78
GARNL3-202ENST00000373387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.16□□□□□ -0.78
GARNL3-202ENST00000373387 MYBBP1AQ9BQG0 1328 aaKnown RBP10.16□□□□□ -0.78
GARNL3-202ENST00000373387 SYCP2Q9BX26 1530 aa10.15□□□□□ -0.78
GARNL3-202ENST00000373387 SPHKAPQ2M3C7 1700 aa10.15□□□□□ -0.78
GARNL3-202ENST00000373387 MYOM1P52179 1685 aa10.15□□□□□ -0.79
GARNL3-202ENST00000373387 CHD1O14646 1710 aa10.14□□□□□ -0.79
GARNL3-202ENST00000373387 CEP152O94986 1710 aa10.14□□□□□ -0.79
GARNL3-202ENST00000373387 JPH4Q96JJ6 628 aa10.14□□□□□ -0.79
GARNL3-202ENST00000373387 MADDQ8WXG6 1647 aa10.14□□□□□ -0.79
GARNL3-202ENST00000373387 PER1O15534 1290 aaPredicted RBP10.14□□□□□ -0.79
GARNL3-202ENST00000373387 RALBP1Q15311 655 aa10.13□□□□□ -0.79
GARNL3-202ENST00000373387 DEPDC5O75140 1603 aa10.13□□□□□ -0.79
GARNL3-202ENST00000373387 ST20-MTHFSA0A0A6YYL1 179 aa10.12□□□□□ -0.79
GARNL3-202ENST00000373387 CLASP1Q7Z460 1538 aa10.11□□□□□ -0.79
GARNL3-202ENST00000373387 CARD11Q9BXL7 1154 aa10.11□□□□□ -0.79
GARNL3-202ENST00000373387 MYT1LQ9UL68 1186 aa10.11□□□□□ -0.79
GARNL3-202ENST00000373387 KIAA1210Q9ULL0 1709 aa10.1□□□□□ -0.79
GARNL3-202ENST00000373387 DUOX2Q9NRD8 1548 aa10.1□□□□□ -0.79
GARNL3-202ENST00000373387 NEURL4Q96JN8 1562 aa10.1□□□□□ -0.79
GARNL3-202ENST00000373387 PLEKHH2Q8IVE3 1493 aa10.1□□□□□ -0.79
GARNL3-202ENST00000373387 PAK3O75914 559 aaPredicted RBP10.1□□□□□ -0.79
GARNL3-202ENST00000373387 TESK2Q96S53 571 aa10.1□□□□□ -0.79
GARNL3-202ENST00000373387 ERCC6Q03468 1493 aa10.1□□□□□ -0.79
GARNL3-202ENST00000373387 WASHC2CQ9Y4E1 1318 aa10.09□□□□□ -0.79
GARNL3-202ENST00000373387 PLEKHD1A6NEE1 506 aa10.09□□□□□ -0.79
GARNL3-202ENST00000373387 CHMP7Q8WUX9 453 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-202ENST00000373387 ZNF777Q9ULD5 760 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-202ENST00000373387 SYNMO15061 1565 aa10.09□□□□□ -0.79
GARNL3-202ENST00000373387 RRP1P56182 461 aaKnown RBP10.09□□□□□ -0.79
GARNL3-202ENST00000373387 NOP58Q9Y2X3 529 aaKnown RBP10.09□□□□□ -0.79
GARNL3-202ENST00000373387 DISP3Q9P2K9 1392 aa10.09□□□□□ -0.79
GARNL3-202ENST00000373387 ERBINQ96RT1 1412 aa10.08□□□□□ -0.8
GARNL3-202ENST00000373387 WDR7Q9Y4E6 1490 aa10.08□□□□□ -0.8
GARNL3-202ENST00000373387 CCDC144AA2RUR9 1427 aa10.08□□□□□ -0.8
GARNL3-202ENST00000373387 ABCC1P33527 1531 aa10.08□□□□□ -0.8
GARNL3-202ENST00000373387 ABCC2Q92887 1545 aa10.08□□□□□ -0.8
GARNL3-202ENST00000373387 IFT172Q9UG01 1749 aa10.08□□□□□ -0.8
GARNL3-202ENST00000373387 VIRMAQ69YN4 1812 aaKnown RBP10.07□□□□□ -0.8
GARNL3-202ENST00000373387 RSPH4AQ5TD94 716 aa10.07□□□□□ -0.8
GARNL3-202ENST00000373387 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
GARNL3-202ENST00000373387 PDE3BQ13370 1112 aa10.07□□□□□ -0.8
GARNL3-202ENST00000373387 TMC1Q8TDI8 760 aa10.07□□□□□ -0.8
GARNL3-202ENST00000373387 TRPM2O94759 1503 aa10.07□□□□□ -0.8
GARNL3-202ENST00000373387 VWDEQ8N2E2 1590 aa10.07□□□□□ -0.8
GARNL3-202ENST00000373387 HNRNPMP52272 730 aaKnown RBP eCLIP10.06□□□□□ -0.8
GARNL3-202ENST00000373387 NLRP13Q86W25 1043 aa10.06□□□□□ -0.8
GARNL3-202ENST00000373387 DCAF11Q8TEB1 546 aa10.06□□□□□ -0.8
GARNL3-202ENST00000373387 IPO9Q96P70 1041 aaKnown RBP10.06□□□□□ -0.8
GARNL3-202ENST00000373387 ZCCHC11Q5TAX3 1644 aaKnown RBP10.06□□□□□ -0.8
GARNL3-202ENST00000373387 ZNF326Q5BKZ1 582 aaKnown RBP10.06□□□□□ -0.8
GARNL3-202ENST00000373387 CCDC136Q96JN2 1154 aa10.06□□□□□ -0.8
GARNL3-202ENST00000373387 ARHGAP5Q13017 1502 aa10.06□□□□□ -0.8
GARNL3-202ENST00000373387 CLTCL1P53675 1640 aa10.05□□□□□ -0.8
GARNL3-202ENST00000373387 TSPY4P0CV99 314 aa10.05□□□□□ -0.8
GARNL3-202ENST00000373387 TSPY10P0CW01 314 aa10.05□□□□□ -0.8
GARNL3-202ENST00000373387 ERCC6L2Q5T890 1561 aa10.05□□□□□ -0.8
GARNL3-202ENST00000373387 ARAP3Q8WWN8 1544 aa10.04□□□□□ -0.8
GARNL3-202ENST00000373387 NBPF1Q3BBV0 1214 aa10.04□□□□□ -0.8
GARNL3-202ENST00000373387 TET3O43151 1660 aa10.04□□□□□ -0.8
GARNL3-202ENST00000373387 MYO3AQ8NEV4 1616 aa10.04□□□□□ -0.8
GARNL3-202ENST00000373387 ZFYVE16Q7Z3T8 1539 aa10.02□□□□□ -0.8
GARNL3-202ENST00000373387 PTPRTO14522 1441 aa10.02□□□□□ -0.8
GARNL3-202ENST00000373387 SCAPERQ9BY12 1400 aa10.02□□□□□ -0.8
GARNL3-202ENST00000373387 EXOC6Q8TAG9 804 aa10.02□□□□□ -0.8
GARNL3-202ENST00000373387 RCAN3Q9UKA8 241 aa10.02□□□□□ -0.8
GARNL3-202ENST00000373387 INO80Q9ULG1 1556 aaPredicted RBP10.02□□□□□ -0.81
GARNL3-202ENST00000373387 MROH1Q8NDA8 1641 aa10.01□□□□□ -0.81
GARNL3-202ENST00000373387 ZC3H13Q5T200 1668 aaKnown RBP10.01□□□□□ -0.81
GARNL3-202ENST00000373387 ZNF521Q96K83 1311 aa10.01□□□□□ -0.81
GARNL3-202ENST00000373387 DEKP35659 375 aaKnown RBP10.01□□□□□ -0.81
GARNL3-202ENST00000373387 UHRF1BP1LA0JNW5 1464 aa10.01□□□□□ -0.81
GARNL3-202ENST00000373387 KDM5AP29375 1690 aaKnown RBP10.01□□□□□ -0.81
GARNL3-202ENST00000373387 KDM2AQ9Y2K7 1162 aa10.01□□□□□ -0.81
GARNL3-202ENST00000373387 TCERG1O14776 1098 aaKnown RBP10□□□□□ -0.81
GARNL3-202ENST00000373387 MS4A1P11836 297 aa10□□□□□ -0.81
GARNL3-202ENST00000373387 PLCH2O75038 1416 aa10□□□□□ -0.81
GARNL3-202ENST00000373387 ABCA9Q8IUA7 1624 aa10□□□□□ -0.81
GARNL3-202ENST00000373387 BACH2Q9BYV9 841 aa10□□□□□ -0.81
GARNL3-202ENST00000373387 POLR3GLQ9BT43 218 aa9.99□□□□□ -0.81
GARNL3-202ENST00000373387 KDM2BQ8NHM5 1336 aa9.99□□□□□ -0.81
GARNL3-202ENST00000373387 CDCA7LQ96GN5 454 aa9.99□□□□□ -0.81
GARNL3-202ENST00000373387 PIK3C2GO75747 1445 aa9.99□□□□□ -0.81
GARNL3-202ENST00000373387 SHPRHQ149N8 1683 aa9.98□□□□□ -0.81
GARNL3-202ENST00000373387 NPC1L1Q9UHC9 1359 aa9.98□□□□□ -0.81
GARNL3-202ENST00000373387 ABCA6Q8N139 1617 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms