RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 ITPRIPQ8IWB1 547 aa13.84□□□□□ -0.19
CSMD2-204ENST00000373380 GRIN2BQ13224 1484 aa13.84□□□□□ -0.19
CSMD2-204ENST00000373380 CFAP43Q8NDM7 1665 aa13.83□□□□□ -0.2
CSMD2-204ENST00000373380 JPH4Q96JJ6 628 aa13.83□□□□□ -0.2
CSMD2-204ENST00000373380 RWDD1Q9H446 243 aaPredicted RBP13.83□□□□□ -0.2
CSMD2-204ENST00000373380 NAIPQ13075 1403 aa13.82□□□□□ -0.2
CSMD2-204ENST00000373380 MYBBP1AQ9BQG0 1328 aaKnown RBP13.82□□□□□ -0.2
CSMD2-204ENST00000373380 SUPT6HQ7KZ85 1726 aaKnown RBP13.82□□□□□ -0.2
CSMD2-204ENST00000373380 NUTM2DQ5VT03 806 aaPredicted RBP13.82□□□□□ -0.2
CSMD2-204ENST00000373380 PDE4AP27815 886 aa13.82□□□□□ -0.2
CSMD2-204ENST00000373380 TAOK2Q9UL54 1235 aa13.82□□□□□ -0.2
CSMD2-204ENST00000373380 OS9Q13438 667 aaPredicted RBP13.81□□□□□ -0.2
CSMD2-204ENST00000373380 RRP7AQ9Y3A4 280 aaKnown RBP13.81□□□□□ -0.2
CSMD2-204ENST00000373380 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
CSMD2-204ENST00000373380 MIA2Q96PC5 1412 aa13.8□□□□□ -0.2
CSMD2-204ENST00000373380 KIF15Q9NS87 1388 aa13.8□□□□□ -0.2
CSMD2-204ENST00000373380 MFAP1P55081 439 aaKnown RBP13.8□□□□□ -0.2
CSMD2-204ENST00000373380 USP47Q96K76 1375 aa13.8□□□□□ -0.2
CSMD2-204ENST00000373380 ZNF644Q9H582 1327 aaPredicted RBP13.79□□□□□ -0.2
CSMD2-204ENST00000373380 BCL2L13Q9BXK5 485 aa13.79□□□□□ -0.2
CSMD2-204ENST00000373380 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
CSMD2-204ENST00000373380 KCNJ4P48050 445 aa13.79□□□□□ -0.2
CSMD2-204ENST00000373380 RRP1P56182 461 aaKnown RBP13.79□□□□□ -0.2
CSMD2-204ENST00000373380 L1TD1Q5T7N2 865 aaKnown RBP13.79□□□□□ -0.2
CSMD2-204ENST00000373380 HECW1Q76N89 1606 aa13.78□□□□□ -0.2
CSMD2-204ENST00000373380 MRC2Q9UBG0 1479 aa13.78□□□□□ -0.2
CSMD2-204ENST00000373380 CTTNBP2Q8WZ74 1663 aa13.78□□□□□ -0.2
CSMD2-204ENST00000373380 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
CSMD2-204ENST00000373380 CENPJQ9HC77 1338 aaPredicted RBP13.78□□□□□ -0.2
CSMD2-204ENST00000373380 ARID3AQ99856 593 aa13.78□□□□□ -0.2
CSMD2-204ENST00000373380 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.2
CSMD2-204ENST00000373380 CRBNQ96SW2 442 aa13.77□□□□□ -0.2
CSMD2-204ENST00000373380 ZRSR1Q15695 479 aaKnown RBP13.77□□□□□ -0.21
CSMD2-204ENST00000373380 KIF7Q2M1P5 1343 aa13.76□□□□□ -0.21
CSMD2-204ENST00000373380 THOC2Q8NI27 1593 aaKnown RBP13.76□□□□□ -0.21
CSMD2-204ENST00000373380 FGD1P98174 961 aa13.76□□□□□ -0.21
CSMD2-204ENST00000373380 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
CSMD2-204ENST00000373380 EPRSP07814 1512 aaKnown RBP13.75□□□□□ -0.21
CSMD2-204ENST00000373380 PMFBP1Q8TBY8 1022 aa13.75□□□□□ -0.21
CSMD2-204ENST00000373380 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
CSMD2-204ENST00000373380 SPAG9O60271 1321 aaKnown RBP13.75□□□□□ -0.21
CSMD2-204ENST00000373380 WASHC2AQ641Q2 1341 aa13.75□□□□□ -0.21
CSMD2-204ENST00000373380 IQGAP2Q13576 1575 aa13.74□□□□□ -0.21
CSMD2-204ENST00000373380 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
CSMD2-204ENST00000373380 FANCIQ9NVI1 1328 aa13.74□□□□□ -0.21
CSMD2-204ENST00000373380 APAF1O14727 1248 aa13.74□□□□□ -0.21
CSMD2-204ENST00000373380 HAP1P54257 671 aaPredicted RBP13.74□□□□□ -0.21
CSMD2-204ENST00000373380 RSPH4AQ5TD94 716 aa13.74□□□□□ -0.21
CSMD2-204ENST00000373380 PTPN23Q9H3S7 1636 aa13.74□□□□□ -0.21
CSMD2-204ENST00000373380 VSIG10Q8N0Z9 540 aa13.74□□□□□ -0.21
CSMD2-204ENST00000373380 CCDC144AA2RUR9 1427 aa13.73□□□□□ -0.21
CSMD2-204ENST00000373380 CCDC7Q96M83 1385 aa13.73□□□□□ -0.21
CSMD2-204ENST00000373380 RTF1Q92541 710 aaKnown RBP13.73□□□□□ -0.21
CSMD2-204ENST00000373380 NAP1L2Q9ULW6 460 aaPredicted RBP13.73□□□□□ -0.21
CSMD2-204ENST00000373380 PTPRKQ15262 1439 aa13.73□□□□□ -0.21
CSMD2-204ENST00000373380 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
CSMD2-204ENST00000373380 COG6Q9Y2V7 657 aa13.72□□□□□ -0.21
CSMD2-204ENST00000373380 ELL2O00472 640 aaPredicted RBP13.71□□□□□ -0.21
CSMD2-204ENST00000373380 MSNP26038 577 aaKnown RBP13.7□□□□□ -0.22
CSMD2-204ENST00000373380 CENPQQ7L2Z9 268 aaPredicted RBP13.7□□□□□ -0.22
CSMD2-204ENST00000373380 GBP4Q96PP9 640 aa13.7□□□□□ -0.22
CSMD2-204ENST00000373380 GOLGA6L4A6NEF3 574 aa13.7□□□□□ -0.22
CSMD2-204ENST00000373380 FAM161AQ3B820 660 aa13.7□□□□□ -0.22
CSMD2-204ENST00000373380 KIAA0586Q9BVV6 1533 aa13.7□□□□□ -0.22
CSMD2-204ENST00000373380 CDK13Q14004 1512 aaKnown RBP13.69□□□□□ -0.22
CSMD2-204ENST00000373380 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
CSMD2-204ENST00000373380 UGGT2Q9NYU1 1516 aa13.68□□□□□ -0.22
CSMD2-204ENST00000373380 MCCP23508 829 aa13.68□□□□□ -0.22
CSMD2-204ENST00000373380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.68□□□□□ -0.22
CSMD2-204ENST00000373380 TERF2IPQ9NYB0 399 aa13.68□□□□□ -0.22
CSMD2-204ENST00000373380 ROCK1Q13464 1354 aa13.68□□□□□ -0.22
CSMD2-204ENST00000373380 WASHC2CQ9Y4E1 1318 aa13.67□□□□□ -0.22
CSMD2-204ENST00000373380 AKNAQ7Z591 1439 aa13.67□□□□□ -0.22
CSMD2-204ENST00000373380 NUTM2FA1L443 756 aa13.67□□□□□ -0.22
CSMD2-204ENST00000373380 DAPK1P53355 1430 aa13.67□□□□□ -0.22
CSMD2-204ENST00000373380 GOLGA6L3A6NEY3 463 aa13.67□□□□□ -0.22
CSMD2-204ENST00000373380 CALD1Q05682 793 aaKnown RBP13.67□□□□□ -0.22
CSMD2-204ENST00000373380 ABCA5Q8WWZ7 1642 aa13.66□□□□□ -0.22
CSMD2-204ENST00000373380 HDGFP51858 240 aaKnown RBP13.66□□□□□ -0.22
CSMD2-204ENST00000373380 SLC4A10Q6U841 1118 aa13.66□□□□□ -0.22
CSMD2-204ENST00000373380 CNTLNQ9NXG0 1405 aa13.66□□□□□ -0.22
CSMD2-204ENST00000373380 SAMD9Q5K651 1589 aa13.65□□□□□ -0.22
CSMD2-204ENST00000373380 E9PSI1 815 aa13.65□□□□□ -0.22
CSMD2-204ENST00000373380 PAK3O75914 559 aaPredicted RBP13.65□□□□□ -0.22
CSMD2-204ENST00000373380 USP35Q9P2H5 1018 aa13.65□□□□□ -0.22
CSMD2-204ENST00000373380 CDCA7LQ96GN5 454 aa13.64□□□□□ -0.23
CSMD2-204ENST00000373380 TROQ12816 1431 aaPredicted RBP13.64□□□□□ -0.23
CSMD2-204ENST00000373380 CCDC184Q52MB2 194 aa13.64□□□□□ -0.23
CSMD2-204ENST00000373380 HSP90AA2PQ14568 343 aaPredicted RBP13.64□□□□□ -0.23
CSMD2-204ENST00000373380 NOL8Q76FK4 1167 aaKnown RBP13.64□□□□□ -0.23
CSMD2-204ENST00000373380 KIAA1211Q6ZU35 1233 aa13.63□□□□□ -0.23
CSMD2-204ENST00000373380 GSE1Q14687 1217 aa13.63□□□□□ -0.23
CSMD2-204ENST00000373380 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
CSMD2-204ENST00000373380 TCOF1Q13428 1488 aaKnown RBP13.63□□□□□ -0.23
CSMD2-204ENST00000373380 NBPF8Q3BBV2 869 aa13.62□□□□□ -0.23
CSMD2-204ENST00000373380 CGNL1Q0VF96 1302 aa13.62□□□□□ -0.23
CSMD2-204ENST00000373380 TRIM6-TRIM34B2RNG4 842 aa13.61□□□□□ -0.23
CSMD2-204ENST00000373380 PRG4Q92954 1404 aaPredicted RBP13.61□□□□□ -0.23
CSMD2-204ENST00000373380 STK31Q9BXU1 1019 aa13.61□□□□□ -0.23
CSMD2-204ENST00000373380 ZKSCAN2Q63HK3 967 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms