RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 CUL7Q14999 1698 aa15.65■□□□□ 0.1
NCDN-202ENST00000373243 EHBP1L1Q8N3D4 1523 aa15.65■□□□□ 0.1
NCDN-202ENST00000373243 ANKRD50Q9ULJ7 1429 aa15.64■□□□□ 0.09
NCDN-202ENST00000373243 EPRSP07814 1512 aaKnown RBP15.63■□□□□ 0.09
NCDN-202ENST00000373243 FAM43AQ8N2R8 423 aa15.63■□□□□ 0.09
NCDN-202ENST00000373243 DAPK1P53355 1430 aa15.63■□□□□ 0.09
NCDN-202ENST00000373243 CARMIL2Q6F5E8 1435 aa15.63■□□□□ 0.09
NCDN-202ENST00000373243 PDE4CQ08493 712 aa15.63■□□□□ 0.09
NCDN-202ENST00000373243 SUPT6HQ7KZ85 1726 aaKnown RBP15.63■□□□□ 0.09
NCDN-202ENST00000373243 SLKQ9H2G2 1235 aaPredicted RBP15.63■□□□□ 0.09
NCDN-202ENST00000373243 SMG6Q86US8 1419 aaKnown RBP15.62■□□□□ 0.09
NCDN-202ENST00000373243 PDE3BQ13370 1112 aa15.62■□□□□ 0.09
NCDN-202ENST00000373243 PLB1Q6P1J6 1458 aa15.61■□□□□ 0.09
NCDN-202ENST00000373243 ADAMTS8Q9UP79 889 aa15.61■□□□□ 0.09
NCDN-202ENST00000373243 GOLGA2Q08379 1002 aa15.61■□□□□ 0.09
NCDN-202ENST00000373243 IQGAP2Q13576 1575 aa15.6■□□□□ 0.09
NCDN-202ENST00000373243 NFKBIBQ15653 356 aa15.6■□□□□ 0.09
NCDN-202ENST00000373243 CLUAP1Q96AJ1 413 aa15.6■□□□□ 0.09
NCDN-202ENST00000373243 ABCC5O15440 1437 aa15.6■□□□□ 0.09
NCDN-202ENST00000373243 RRP7AQ9Y3A4 280 aaKnown RBP15.59■□□□□ 0.09
NCDN-202ENST00000373243 MIA2Q96PC5 1412 aa15.59■□□□□ 0.09
NCDN-202ENST00000373243 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
NCDN-202ENST00000373243 PNNQ9H307 717 aaKnown RBP15.59■□□□□ 0.09
NCDN-202ENST00000373243 CCDC144AA2RUR9 1427 aa15.59■□□□□ 0.09
NCDN-202ENST00000373243 APAF1O14727 1248 aa15.58■□□□□ 0.09
NCDN-202ENST00000373243 SAFB2Q14151 953 aaKnown RBP eCLIP15.58■□□□□ 0.09
NCDN-202ENST00000373243 TARBP1Q13395 1621 aaKnown RBP15.58■□□□□ 0.08
NCDN-202ENST00000373243 ABCA5Q8WWZ7 1642 aa15.58■□□□□ 0.08
NCDN-202ENST00000373243 CDCA8Q53HL2 280 aa15.58■□□□□ 0.08
NCDN-202ENST00000373243 BCL2L13Q9BXK5 485 aa15.58■□□□□ 0.08
NCDN-202ENST00000373243 PTPRGP23470 1445 aa15.58■□□□□ 0.08
NCDN-202ENST00000373243 KIAA1107Q9UPP5 1409 aa15.57■□□□□ 0.08
NCDN-202ENST00000373243 C20orf194Q5TEA3 1177 aa15.56■□□□□ 0.08
NCDN-202ENST00000373243 KIAA0586Q9BVV6 1533 aa15.56■□□□□ 0.08
NCDN-202ENST00000373243 RPRD2Q5VT52 1461 aaKnown RBP15.56■□□□□ 0.08
NCDN-202ENST00000373243 BRD4O60885 1362 aaPredicted RBP15.55■□□□□ 0.08
NCDN-202ENST00000373243 BACH2Q9BYV9 841 aa15.54■□□□□ 0.08
NCDN-202ENST00000373243 BECN1Q14457 450 aa15.53■□□□□ 0.08
NCDN-202ENST00000373243 COG6Q9Y2V7 657 aa15.53■□□□□ 0.08
NCDN-202ENST00000373243 CFAP43Q8NDM7 1665 aa15.52■□□□□ 0.08
NCDN-202ENST00000373243 U2SURPO15042 1029 aaKnown RBP15.52■□□□□ 0.07
NCDN-202ENST00000373243 CTTNBP2Q8WZ74 1663 aa15.52■□□□□ 0.07
NCDN-202ENST00000373243 NUTM2DQ5VT03 806 aaPredicted RBP15.52■□□□□ 0.07
NCDN-202ENST00000373243 THOC2Q8NI27 1593 aaKnown RBP15.51■□□□□ 0.07
NCDN-202ENST00000373243 RRP9O43818 475 aaKnown RBP15.51■□□□□ 0.07
NCDN-202ENST00000373243 MORC1Q86VD1 984 aa15.51■□□□□ 0.07
NCDN-202ENST00000373243 FTSJ3Q8IY81 847 aaKnown RBP15.51■□□□□ 0.07
NCDN-202ENST00000373243 GZF1Q9H116 711 aaPredicted RBP15.5■□□□□ 0.07
NCDN-202ENST00000373243 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
NCDN-202ENST00000373243 SYNJ2O15056 1496 aa15.5■□□□□ 0.07
NCDN-202ENST00000373243 MS4A1P11836 297 aa15.5■□□□□ 0.07
NCDN-202ENST00000373243 ADAMTS12P58397 1594 aa15.49■□□□□ 0.07
NCDN-202ENST00000373243 FAM161AQ3B820 660 aa15.49■□□□□ 0.07
NCDN-202ENST00000373243 UGGT2Q9NYU1 1516 aa15.49■□□□□ 0.07
NCDN-202ENST00000373243 FGD1P98174 961 aa15.48■□□□□ 0.07
NCDN-202ENST00000373243 KIF3BO15066 747 aa15.48■□□□□ 0.07
NCDN-202ENST00000373243 AAMPQ13685 434 aa15.48■□□□□ 0.07
NCDN-202ENST00000373243 CENPQQ7L2Z9 268 aaPredicted RBP15.48■□□□□ 0.07
NCDN-202ENST00000373243 HECW1Q76N89 1606 aa15.48■□□□□ 0.07
NCDN-202ENST00000373243 RRAGDQ9NQL2 400 aaPredicted RBP15.48■□□□□ 0.07
NCDN-202ENST00000373243 WDR62O43379 1518 aa15.47■□□□□ 0.07
NCDN-202ENST00000373243 ROCK1Q13464 1354 aa15.47■□□□□ 0.07
NCDN-202ENST00000373243 ARID3AQ99856 593 aa15.47■□□□□ 0.07
NCDN-202ENST00000373243 FRAT2O75474 233 aaPredicted RBP15.47■□□□□ 0.07
NCDN-202ENST00000373243 BCAR3O75815 825 aa15.47■□□□□ 0.07
NCDN-202ENST00000373243 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
NCDN-202ENST00000373243 TROQ12816 1431 aaPredicted RBP15.47■□□□□ 0.07
NCDN-202ENST00000373243 BCL11BQ9C0K0 894 aaPredicted RBP15.46■□□□□ 0.07
NCDN-202ENST00000373243 TRAK1Q9UPV9 953 aa15.46■□□□□ 0.07
NCDN-202ENST00000373243 PBRM1Q86U86 1689 aa15.46■□□□□ 0.06
NCDN-202ENST00000373243 PANK1Q8TE04 598 aa15.46■□□□□ 0.06
NCDN-202ENST00000373243 DHX29Q7Z478 1369 aaKnown RBP15.45■□□□□ 0.06
NCDN-202ENST00000373243 C9orf84Q5VXU9 1444 aa15.45■□□□□ 0.06
NCDN-202ENST00000373243 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
NCDN-202ENST00000373243 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
NCDN-202ENST00000373243 GGT6Q6P531 493 aa15.45■□□□□ 0.06
NCDN-202ENST00000373243 CFAP53Q96M91 514 aa15.45■□□□□ 0.06
NCDN-202ENST00000373243 MAGI3Q5TCQ9 1506 aa15.45■□□□□ 0.06
NCDN-202ENST00000373243 PPP2R1AP30153 589 aa15.45■□□□□ 0.06
NCDN-202ENST00000373243 EFCAB2Q5VUJ9 269 aa15.44■□□□□ 0.06
NCDN-202ENST00000373243 STK26Q9P289 416 aa15.44■□□□□ 0.06
NCDN-202ENST00000373243 CENPJQ9HC77 1338 aaPredicted RBP15.43■□□□□ 0.06
NCDN-202ENST00000373243 AEBP2Q6ZN18 517 aaPredicted RBP15.43■□□□□ 0.06
NCDN-202ENST00000373243 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
NCDN-202ENST00000373243 KDM6BO15054 1643 aa15.43■□□□□ 0.06
NCDN-202ENST00000373243 MAGI1Q96QZ7 1491 aaPredicted RBP15.43■□□□□ 0.06
NCDN-202ENST00000373243 DISP1Q96F81 1524 aa15.43■□□□□ 0.06
NCDN-202ENST00000373243 NUP153P49790 1475 aaKnown RBP15.42■□□□□ 0.06
NCDN-202ENST00000373243 CAMSAP2Q08AD1 1489 aa15.41■□□□□ 0.06
NCDN-202ENST00000373243 SPAG9O60271 1321 aaKnown RBP15.4■□□□□ 0.06
NCDN-202ENST00000373243 PDIA4P13667 645 aaKnown RBP15.4■□□□□ 0.06
NCDN-202ENST00000373243 RSPH4AQ5TD94 716 aa15.4■□□□□ 0.06
NCDN-202ENST00000373243 AFAP1Q8N556 730 aa15.4■□□□□ 0.06
NCDN-202ENST00000373243 MFAP1P55081 439 aaKnown RBP15.39■□□□□ 0.05
NCDN-202ENST00000373243 CFAP70Q5T0N1 1121 aa15.39■□□□□ 0.05
NCDN-202ENST00000373243 ARHGEF11O15085 1522 aa15.38■□□□□ 0.05
NCDN-202ENST00000373243 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
NCDN-202ENST00000373243 SAMD9Q5K651 1589 aa15.37■□□□□ 0.05
NCDN-202ENST00000373243 SRPK2P78362 688 aaKnown RBP15.36■□□□□ 0.05
NCDN-202ENST00000373243 AMER1Q5JTC6 1135 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms