RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 GOLGA6L22H0YM25 854 aa8.57□□□□□ -1.04
CHD6-203ENST00000373233 DCAF11Q8TEB1 546 aa8.57□□□□□ -1.04
CHD6-203ENST00000373233 CHAF1AQ13111 956 aaPredicted RBP8.56□□□□□ -1.04
CHD6-203ENST00000373233 ABCC2Q92887 1545 aa8.56□□□□□ -1.04
CHD6-203ENST00000373233 PPP1R15AO75807 674 aaPredicted RBP8.56□□□□□ -1.04
CHD6-203ENST00000373233 HSPA5P11021 654 aaKnown RBP8.56□□□□□ -1.04
CHD6-203ENST00000373233 CFAP65Q6ZU64 1925 aaKnown RBP8.56□□□□□ -1.04
CHD6-203ENST00000373233 TCOF1Q13428 1488 aaKnown RBP8.55□□□□□ -1.04
CHD6-203ENST00000373233 CCDC144AA2RUR9 1427 aa8.55□□□□□ -1.04
CHD6-203ENST00000373233 AKNAQ7Z591 1439 aa8.55□□□□□ -1.04
CHD6-203ENST00000373233 ATP10BO94823 1461 aa8.55□□□□□ -1.04
CHD6-203ENST00000373233 ROCK2O75116 1388 aaKnown RBP8.55□□□□□ -1.04
CHD6-203ENST00000373233 GPATCH8Q9UKJ3 1502 aaKnown RBP8.55□□□□□ -1.04
CHD6-203ENST00000373233 ABCC5O15440 1437 aa8.55□□□□□ -1.04
CHD6-203ENST00000373233 CYB5RLQ6IPT4 315 aa8.54□□□□□ -1.04
CHD6-203ENST00000373233 MSNP26038 577 aaKnown RBP8.54□□□□□ -1.04
CHD6-203ENST00000373233 L3MBTL2Q969R5 705 aa8.54□□□□□ -1.04
CHD6-203ENST00000373233 SENP3Q9H4L4 574 aaPredicted RBP8.54□□□□□ -1.04
CHD6-203ENST00000373233 MAGI3Q5TCQ9 1506 aa8.53□□□□□ -1.04
CHD6-203ENST00000373233 CDC42BPAQ5VT25 1732 aa8.53□□□□□ -1.04
CHD6-203ENST00000373233 SALL2Q9Y467 1007 aaPredicted RBP8.53□□□□□ -1.04
CHD6-203ENST00000373233 ABCA8O94911 1581 aa8.53□□□□□ -1.04
CHD6-203ENST00000373233 KIF3BO15066 747 aa8.53□□□□□ -1.04
CHD6-203ENST00000373233 MRS2Q9HD23 443 aa8.53□□□□□ -1.04
CHD6-203ENST00000373233 SYCP2Q9BX26 1530 aa8.52□□□□□ -1.05
CHD6-203ENST00000373233 GGT6Q6P531 493 aa8.52□□□□□ -1.05
CHD6-203ENST00000373233 ADCY10Q96PN6 1610 aa8.52□□□□□ -1.05
CHD6-203ENST00000373233 CALRP27797 417 aaKnown RBP8.51□□□□□ -1.05
CHD6-203ENST00000373233 APPP05067 770 aa8.51□□□□□ -1.05
CHD6-203ENST00000373233 FAM9BQ8IZU0 186 aa8.51□□□□□ -1.05
CHD6-203ENST00000373233 UBE2Q2Q8WVN8 375 aa8.51□□□□□ -1.05
CHD6-203ENST00000373233 PDE4CQ08493 712 aa8.5□□□□□ -1.05
CHD6-203ENST00000373233 KIAA1107Q9UPP5 1409 aa8.5□□□□□ -1.05
CHD6-203ENST00000373233 ZCCHC11Q5TAX3 1644 aaKnown RBP8.5□□□□□ -1.05
CHD6-203ENST00000373233 MAPKBP1O60336 1514 aa8.5□□□□□ -1.05
CHD6-203ENST00000373233 CDCA8Q53HL2 280 aa8.49□□□□□ -1.05
CHD6-203ENST00000373233 SHANK2Q9UPX8 1470 aa8.49□□□□□ -1.05
CHD6-203ENST00000373233 EIF3AQ14152 1382 aaKnown RBP8.49□□□□□ -1.05
CHD6-203ENST00000373233 MLECQ14165 292 aa8.49□□□□□ -1.05
CHD6-203ENST00000373233 PTPRKQ15262 1439 aa8.49□□□□□ -1.05
CHD6-203ENST00000373233 CROCC2H7BZ55 1655 aa8.49□□□□□ -1.05
CHD6-203ENST00000373233 WDR7Q9Y4E6 1490 aa8.49□□□□□ -1.05
CHD6-203ENST00000373233 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.48□□□□□ -1.05
CHD6-203ENST00000373233 TRHP20396 242 aaPredicted RBP8.48□□□□□ -1.05
CHD6-203ENST00000373233 PPP4R2Q9NY27 417 aa8.48□□□□□ -1.05
CHD6-203ENST00000373233 ADGRL1O94910 1474 aa8.48□□□□□ -1.05
CHD6-203ENST00000373233 TMC1Q8TDI8 760 aa8.48□□□□□ -1.05
CHD6-203ENST00000373233 PREX2Q70Z35 1606 aa8.48□□□□□ -1.05
CHD6-203ENST00000373233 WASHC2CQ9Y4E1 1318 aa8.48□□□□□ -1.05
CHD6-203ENST00000373233 FAM69CQ0P6D2 419 aa8.48□□□□□ -1.05
CHD6-203ENST00000373233 USP47Q96K76 1375 aa8.47□□□□□ -1.05
CHD6-203ENST00000373233 NCOA1Q15788 1441 aa8.47□□□□□ -1.05
CHD6-203ENST00000373233 FANCAO15360 1455 aa8.47□□□□□ -1.05
CHD6-203ENST00000373233 TTC37Q6PGP7 1564 aa8.46□□□□□ -1.05
CHD6-203ENST00000373233 ASXL2Q76L83 1435 aa8.46□□□□□ -1.05
CHD6-203ENST00000373233 CFAP74Q9C0B2 1584 aa8.46□□□□□ -1.05
CHD6-203ENST00000373233 TSPOAP1O95153 1857 aa8.46□□□□□ -1.06
CHD6-203ENST00000373233 TMF1P82094 1093 aa8.45□□□□□ -1.06
CHD6-203ENST00000373233 AFAP1Q8N556 730 aa8.45□□□□□ -1.06
CHD6-203ENST00000373233 SCAPERQ9BY12 1400 aa8.45□□□□□ -1.06
CHD6-203ENST00000373233 KNSTRNQ9Y448 316 aa8.45□□□□□ -1.06
CHD6-203ENST00000373233 ARHGEF5Q12774 1597 aa8.45□□□□□ -1.06
CHD6-203ENST00000373233 CD109Q6YHK3 1445 aa8.44□□□□□ -1.06
CHD6-203ENST00000373233 DUOX2Q9NRD8 1548 aa8.44□□□□□ -1.06
CHD6-203ENST00000373233 ERCC6L2Q5T890 1561 aa8.44□□□□□ -1.06
CHD6-203ENST00000373233 FAM135AQ9P2D6 1515 aa8.44□□□□□ -1.06
CHD6-203ENST00000373233 CDC42BPBQ9Y5S2 1711 aa8.43□□□□□ -1.06
CHD6-203ENST00000373233 SHROOM2Q13796 1616 aa8.43□□□□□ -1.06
CHD6-203ENST00000373233 CCER2I3L3R5 266 aa8.43□□□□□ -1.06
CHD6-203ENST00000373233 PLCH2O75038 1416 aa8.43□□□□□ -1.06
CHD6-203ENST00000373233 WDR43Q15061 677 aaKnown RBP eCLIP8.43□□□□□ -1.06
CHD6-203ENST00000373233 POGKQ9P215 609 aa8.43□□□□□ -1.06
CHD6-203ENST00000373233 ABCC10Q5T3U5 1492 aa8.42□□□□□ -1.06
CHD6-203ENST00000373233 UHRF1BP1LA0JNW5 1464 aa8.42□□□□□ -1.06
CHD6-203ENST00000373233 ANKRD30BQ9BXX2 1392 aa8.42□□□□□ -1.06
CHD6-203ENST00000373233 KTN1Q86UP2 1357 aaKnown RBP8.42□□□□□ -1.06
CHD6-203ENST00000373233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.41□□□□□ -1.06
CHD6-203ENST00000373233 SAMD9LQ8IVG5 1584 aa8.41□□□□□ -1.06
CHD6-203ENST00000373233 MAST1Q9Y2H9 1570 aa8.41□□□□□ -1.06
CHD6-203ENST00000373233 CC2D1BQ5T0F9 858 aaKnown RBP8.4□□□□□ -1.06
CHD6-203ENST00000373233 CLASP1Q7Z460 1538 aa8.4□□□□□ -1.06
CHD6-203ENST00000373233 ADGRL2O95490 1459 aa8.4□□□□□ -1.06
CHD6-203ENST00000373233 KDM6BO15054 1643 aa8.4□□□□□ -1.06
CHD6-203ENST00000373233 GOLGA6L3A6NEY3 463 aa8.4□□□□□ -1.06
CHD6-203ENST00000373233 USP35Q9P2H5 1018 aa8.4□□□□□ -1.06
CHD6-203ENST00000373233 ERBINQ96RT1 1412 aa8.4□□□□□ -1.07
CHD6-203ENST00000373233 GOLGA6L6A8MZA4 724 aa8.4□□□□□ -1.07
CHD6-203ENST00000373233 IPO9Q96P70 1041 aaKnown RBP8.39□□□□□ -1.07
CHD6-203ENST00000373233 ZNF771Q7L3S4 317 aaPredicted RBP8.39□□□□□ -1.07
CHD6-203ENST00000373233 HAP1P54257 671 aaPredicted RBP8.39□□□□□ -1.07
CHD6-203ENST00000373233 KIAA2012Q0VF49 1180 aa8.38□□□□□ -1.07
CHD6-203ENST00000373233 ATP7AQ04656 1500 aa8.38□□□□□ -1.07
CHD6-203ENST00000373233 NUTM2DQ5VT03 806 aaPredicted RBP8.38□□□□□ -1.07
CHD6-203ENST00000373233 CNTLNQ9NXG0 1405 aa8.38□□□□□ -1.07
CHD6-203ENST00000373233 CCDC7Q96M83 1385 aa8.38□□□□□ -1.07
CHD6-203ENST00000373233 HDGFP51858 240 aaKnown RBP8.38□□□□□ -1.07
CHD6-203ENST00000373233 KIF1BO60333 1816 aa8.37□□□□□ -1.07
CHD6-203ENST00000373233 STK26Q9P289 416 aa8.37□□□□□ -1.07
CHD6-203ENST00000373233 KDM5BQ9UGL1 1544 aa8.37□□□□□ -1.07
CHD6-203ENST00000373233 ST20-MTHFSA0A0A6YYL1 179 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms