RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 RILPL2Q969X0 211 aa19.34■□□□□ 0.69
CHST3-201ENST00000373115 DDX11L8A8MPP1 907 aa19.33■□□□□ 0.69
CHST3-201ENST00000373115 G3V3G9 751 aa19.33■□□□□ 0.68
CHST3-201ENST00000373115 DCAF8Q5TAQ9 597 aa19.33■□□□□ 0.68
CHST3-201ENST00000373115 CENPJQ9HC77 1338 aaPredicted RBP19.33■□□□□ 0.68
CHST3-201ENST00000373115 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.32■□□□□ 0.68
CHST3-201ENST00000373115 USP35Q9P2H5 1018 aa19.32■□□□□ 0.68
CHST3-201ENST00000373115 DDX49Q9Y6V7 483 aaKnown RBP19.31■□□□□ 0.68
CHST3-201ENST00000373115 GOLGA6L19H0YKK7 550 aa19.31■□□□□ 0.68
CHST3-201ENST00000373115 RSPH6AQ9H0K4 717 aa19.31■□□□□ 0.68
CHST3-201ENST00000373115 RRP7AQ9Y3A4 280 aaKnown RBP19.29■□□□□ 0.68
CHST3-201ENST00000373115 FRAT2O75474 233 aaPredicted RBP19.29■□□□□ 0.68
CHST3-201ENST00000373115 TSR1Q2NL82 804 aaKnown RBP19.29■□□□□ 0.68
CHST3-201ENST00000373115 NUTM2DQ5VT03 806 aaPredicted RBP19.29■□□□□ 0.68
CHST3-201ENST00000373115 FAM184AQ8NB25 1140 aa19.28■□□□□ 0.68
CHST3-201ENST00000373115 LTV1Q96GA3 475 aaPredicted RBP19.28■□□□□ 0.68
CHST3-201ENST00000373115 TIMELESSQ9UNS1 1208 aa19.28■□□□□ 0.68
CHST3-201ENST00000373115 ARHGAP35Q9NRY4 1499 aa19.27■□□□□ 0.68
CHST3-201ENST00000373115 PLIN1O60240 522 aa19.27■□□□□ 0.68
CHST3-201ENST00000373115 ANKRD45Q5TZF3 282 aa19.26■□□□□ 0.67
CHST3-201ENST00000373115 FHAD1B1AJZ9 1412 aa19.26■□□□□ 0.67
CHST3-201ENST00000373115 GSE1Q14687 1217 aa19.26■□□□□ 0.67
CHST3-201ENST00000373115 MCTP1Q6DN14 999 aa19.26■□□□□ 0.67
CHST3-201ENST00000373115 BECN2A8MW95 431 aa19.25■□□□□ 0.67
CHST3-201ENST00000373115 BCL2L13Q9BXK5 485 aa19.25■□□□□ 0.67
CHST3-201ENST00000373115 BCL11BQ9C0K0 894 aaPredicted RBP19.25■□□□□ 0.67
CHST3-201ENST00000373115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.25■□□□□ 0.67
CHST3-201ENST00000373115 MPHOSPH9Q99550 1183 aa19.23■□□□□ 0.67
CHST3-201ENST00000373115 BAZ1BQ9UIG0 1483 aaKnown RBP19.23■□□□□ 0.67
CHST3-201ENST00000373115 KIF3AQ9Y496 699 aa19.22■□□□□ 0.67
CHST3-201ENST00000373115 PCMTD1Q96MG8 357 aaPredicted RBP19.22■□□□□ 0.67
CHST3-201ENST00000373115 ELL2O00472 640 aaPredicted RBP19.21■□□□□ 0.67
CHST3-201ENST00000373115 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
CHST3-201ENST00000373115 PDE4AP27815 886 aa19.21■□□□□ 0.67
CHST3-201ENST00000373115 FBXW7Q969H0 707 aa19.21■□□□□ 0.67
CHST3-201ENST00000373115 TPM2P07951 284 aa19.2■□□□□ 0.66
CHST3-201ENST00000373115 FAM13BQ9NYF5 915 aa19.2■□□□□ 0.66
CHST3-201ENST00000373115 NUTM2FA1L443 756 aa19.2■□□□□ 0.66
CHST3-201ENST00000373115 GPS2Q13227 327 aa19.2■□□□□ 0.66
CHST3-201ENST00000373115 CCDC70Q6NSX1 233 aa19.2■□□□□ 0.66
CHST3-201ENST00000373115 FAM161AQ3B820 660 aa19.19■□□□□ 0.66
CHST3-201ENST00000373115 TPM1P09493 284 aa19.19■□□□□ 0.66
CHST3-201ENST00000373115 RAB3GAP2Q9H2M9 1393 aa19.19■□□□□ 0.66
CHST3-201ENST00000373115 AMPHP49418 695 aa19.19■□□□□ 0.66
CHST3-201ENST00000373115 AKAP17AQ02040 695 aaKnown RBP19.18■□□□□ 0.66
CHST3-201ENST00000373115 EIF3AQ14152 1382 aaKnown RBP19.18■□□□□ 0.66
CHST3-201ENST00000373115 KANK4Q5T7N3 995 aaPredicted RBP19.18■□□□□ 0.66
CHST3-201ENST00000373115 HDAC5Q9UQL6 1122 aa19.18■□□□□ 0.66
CHST3-201ENST00000373115 RAD21O60216 631 aa19.17■□□□□ 0.66
CHST3-201ENST00000373115 CRBNQ96SW2 442 aa19.17■□□□□ 0.66
CHST3-201ENST00000373115 NUP155O75694 1391 aa19.17■□□□□ 0.66
CHST3-201ENST00000373115 SKOR2Q2VWA4 1001 aaPredicted RBP19.17■□□□□ 0.66
CHST3-201ENST00000373115 GTF2E1P29083 439 aaPredicted RBP19.16■□□□□ 0.66
CHST3-201ENST00000373115 CENPQQ7L2Z9 268 aaPredicted RBP19.16■□□□□ 0.66
CHST3-201ENST00000373115 EXOC6Q8TAG9 804 aa19.16■□□□□ 0.66
CHST3-201ENST00000373115 TERF2IPQ9NYB0 399 aa19.15■□□□□ 0.66
CHST3-201ENST00000373115 HOMER1Q86YM7 354 aa19.15■□□□□ 0.66
CHST3-201ENST00000373115 NGDNQ8NEJ9 315 aaKnown RBP19.15■□□□□ 0.66
CHST3-201ENST00000373115 CHMP4AQ9BY43 222 aa19.14■□□□□ 0.66
CHST3-201ENST00000373115 FOSBP53539 338 aa19.14■□□□□ 0.65
CHST3-201ENST00000373115 NGEFQ8N5V2 710 aa19.14■□□□□ 0.65
CHST3-201ENST00000373115 LMOD3Q0VAK6 560 aa19.13■□□□□ 0.65
CHST3-201ENST00000373115 ATP6V1DQ9Y5K8 247 aa19.13■□□□□ 0.65
CHST3-201ENST00000373115 NLRP13Q86W25 1043 aa19.12■□□□□ 0.65
CHST3-201ENST00000373115 ANO2Q9NQ90 1003 aa19.12■□□□□ 0.65
CHST3-201ENST00000373115 TEX35Q5T0J7 233 aa19.11■□□□□ 0.65
CHST3-201ENST00000373115 CARMIL1Q5VZK9 1371 aa19.11■□□□□ 0.65
CHST3-201ENST00000373115 CALRP27797 417 aaKnown RBP19.1■□□□□ 0.65
CHST3-201ENST00000373115 PDE3BQ13370 1112 aa19.1■□□□□ 0.65
CHST3-201ENST00000373115 SYNE3Q6ZMZ3 975 aa19.1■□□□□ 0.65
CHST3-201ENST00000373115 SOGA1O94964 1423 aa19.1■□□□□ 0.65
CHST3-201ENST00000373115 DIAPH3Q9NSV4 1193 aa19.1■□□□□ 0.65
CHST3-201ENST00000373115 COG6Q9Y2V7 657 aa19.1■□□□□ 0.65
CHST3-201ENST00000373115 NECTIN2Q92692 538 aa19.09■□□□□ 0.65
CHST3-201ENST00000373115 TRIM29Q14134 588 aa19.08■□□□□ 0.65
CHST3-201ENST00000373115 BICD2Q8TD16 824 aa19.08■□□□□ 0.65
CHST3-201ENST00000373115 CUX2O14529 1486 aa19.08■□□□□ 0.65
CHST3-201ENST00000373115 TCEAL9Q9UHQ7 104 aa19.08■□□□□ 0.64
CHST3-201ENST00000373115 L3MBTL2Q969R5 705 aa19.08■□□□□ 0.64
CHST3-201ENST00000373115 RRP1P56182 461 aaKnown RBP19.07■□□□□ 0.64
CHST3-201ENST00000373115 TRAK1Q9UPV9 953 aa19.07■□□□□ 0.64
CHST3-201ENST00000373115 KIF15Q9NS87 1388 aa19.06■□□□□ 0.64
CHST3-201ENST00000373115 APPP05067 770 aa19.06■□□□□ 0.64
CHST3-201ENST00000373115 PANK3Q9H999 370 aa19.06■□□□□ 0.64
CHST3-201ENST00000373115 IPO7O95373 1038 aaKnown RBP19.05■□□□□ 0.64
CHST3-201ENST00000373115 RRP12Q5JTH9 1297 aaKnown RBP19.05■□□□□ 0.64
CHST3-201ENST00000373115 NAP1L1P55209 391 aaKnown RBP19.05■□□□□ 0.64
CHST3-201ENST00000373115 EIF2S2P20042 333 aaKnown RBP19.05■□□□□ 0.64
CHST3-201ENST00000373115 ZKSCAN2Q63HK3 967 aa19.05■□□□□ 0.64
CHST3-201ENST00000373115 MYBBP1AQ9BQG0 1328 aaKnown RBP19.04■□□□□ 0.64
CHST3-201ENST00000373115 RB1CC1Q8TDY2 1594 aa19.04■□□□□ 0.64
CHST3-201ENST00000373115 HNRNPMP52272 730 aaKnown RBP eCLIP19.03■□□□□ 0.642e-6■■□□□ 13.1
CHST3-201ENST00000373115 IFT57Q9NWB7 429 aa19.03■□□□□ 0.64
CHST3-201ENST00000373115 KIF3BO15066 747 aa19.03■□□□□ 0.64
CHST3-201ENST00000373115 RUFY1Q96T51 708 aa19.02■□□□□ 0.64
CHST3-201ENST00000373115 VPS37CA5D8V6 355 aaPredicted RBP19.02■□□□□ 0.64
CHST3-201ENST00000373115 ANKRD20A12PQ8NF67 263 aa19.02■□□□□ 0.64
CHST3-201ENST00000373115 DHX16O60231 1041 aaKnown RBP19.01■□□□□ 0.63
CHST3-201ENST00000373115 SASS6Q6UVJ0 657 aa19.01■□□□□ 0.63
CHST3-201ENST00000373115 ANKRD30AQ9BXX3 1397 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms