RNA–Protein interactions for RNA: ENST00000373091.7

GRIK3-201, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRIK3, Length 9,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-201ENST00000373091 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
GRIK3-201ENST00000373091 CUX1P39880 1505 aa13.63□□□□□ -0.23
GRIK3-201ENST00000373091 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.63□□□□□ -0.23
GRIK3-201ENST00000373091 ZBED9Q6R2W3 1325 aa13.63□□□□□ -0.23
GRIK3-201ENST00000373091 FAM161AQ3B820 660 aa13.62□□□□□ -0.23
GRIK3-201ENST00000373091 TSHZ2Q9NRE2 1034 aa13.62□□□□□ -0.23
GRIK3-201ENST00000373091 APBB1O00213 710 aa13.62□□□□□ -0.23
GRIK3-201ENST00000373091 NOM1Q5C9Z4 860 aaKnown RBP13.62□□□□□ -0.23
GRIK3-201ENST00000373091 TERF2IPQ9NYB0 399 aa13.62□□□□□ -0.23
GRIK3-201ENST00000373091 GORABQ5T7V8 394 aa13.62□□□□□ -0.23
GRIK3-201ENST00000373091 ROCK1Q13464 1354 aa13.61□□□□□ -0.23
GRIK3-201ENST00000373091 CALRP27797 417 aaKnown RBP13.6□□□□□ -0.23
GRIK3-201ENST00000373091 FANCIQ9NVI1 1328 aa13.6□□□□□ -0.23
GRIK3-201ENST00000373091 TMX4Q9H1E5 349 aaPredicted RBP13.6□□□□□ -0.23
GRIK3-201ENST00000373091 H3BQV1 296 aa13.6□□□□□ -0.23
GRIK3-201ENST00000373091 LRRFIP1Q32MZ4 808 aaKnown RBP13.6□□□□□ -0.23
GRIK3-201ENST00000373091 IFFO2Q5TF58 517 aa13.6□□□□□ -0.23
GRIK3-201ENST00000373091 HOOK1Q9UJC3 728 aaKnown RBP13.59□□□□□ -0.23
GRIK3-201ENST00000373091 MYBBP1AQ9BQG0 1328 aaKnown RBP13.59□□□□□ -0.23
GRIK3-201ENST00000373091 REC8O95072 547 aa13.59□□□□□ -0.23
GRIK3-201ENST00000373091 ZNF771Q7L3S4 317 aaPredicted RBP13.58□□□□□ -0.24
GRIK3-201ENST00000373091 IPO7O95373 1038 aaKnown RBP13.58□□□□□ -0.24
GRIK3-201ENST00000373091 TPD52L1Q16890 204 aaPredicted RBP13.58□□□□□ -0.24
GRIK3-201ENST00000373091 NUP155O75694 1391 aa13.57□□□□□ -0.24
GRIK3-201ENST00000373091 SF3A1Q15459 793 aaKnown RBP13.57□□□□□ -0.24
GRIK3-201ENST00000373091 BECN2A8MW95 431 aa13.57□□□□□ -0.24
GRIK3-201ENST00000373091 PKD2Q13563 968 aa13.57□□□□□ -0.24
GRIK3-201ENST00000373091 ANKRD20A12PQ8NF67 263 aa13.57□□□□□ -0.24
GRIK3-201ENST00000373091 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
GRIK3-201ENST00000373091 NCBP3Q53F19 620 aaKnown RBP13.56□□□□□ -0.24
GRIK3-201ENST00000373091 DDX49Q9Y6V7 483 aaKnown RBP13.56□□□□□ -0.24
GRIK3-201ENST00000373091 SOGA1O94964 1423 aa13.55□□□□□ -0.24
GRIK3-201ENST00000373091 MAP7D2Q96T17 732 aa13.55□□□□□ -0.24
GRIK3-201ENST00000373091 ACBD3Q9H3P7 528 aa13.54□□□□□ -0.24
GRIK3-201ENST00000373091 NGEFQ8N5V2 710 aa13.54□□□□□ -0.24
GRIK3-201ENST00000373091 ARGLU1Q9NWB6 273 aaPredicted RBP13.54□□□□□ -0.24
GRIK3-201ENST00000373091 CCDC144AA2RUR9 1427 aa13.54□□□□□ -0.24
GRIK3-201ENST00000373091 AAMPQ13685 434 aa13.54□□□□□ -0.24
GRIK3-201ENST00000373091 TAF7LQ5H9L4 462 aa13.54□□□□□ -0.24
GRIK3-201ENST00000373091 CHMP3Q9Y3E7 222 aa13.53□□□□□ -0.24
GRIK3-201ENST00000373091 AK7Q96M32 723 aa13.52□□□□□ -0.24
GRIK3-201ENST00000373091 MPHOSPH9Q99550 1183 aa13.52□□□□□ -0.24
GRIK3-201ENST00000373091 CWC15Q9P013 229 aaKnown RBP13.52□□□□□ -0.24
GRIK3-201ENST00000373091 CDR1P51861 262 aa13.52□□□□□ -0.25
GRIK3-201ENST00000373091 E9PSI1 815 aa13.52□□□□□ -0.25
GRIK3-201ENST00000373091 CREBRFQ8IUR6 639 aa13.52□□□□□ -0.25
GRIK3-201ENST00000373091 PRM3Q9NNZ6 103 aa13.52□□□□□ -0.25
GRIK3-201ENST00000373091 CCAR2Q8N163 923 aaKnown RBP13.51□□□□□ -0.25
GRIK3-201ENST00000373091 PES1O00541 588 aaKnown RBP13.51□□□□□ -0.25
GRIK3-201ENST00000373091 FAM184AQ8NB25 1140 aa13.51□□□□□ -0.25
GRIK3-201ENST00000373091 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
GRIK3-201ENST00000373091 SMARCA4P51532 1647 aa13.51□□□□□ -0.25
GRIK3-201ENST00000373091 RUFY2Q8WXA3 655 aa13.51□□□□□ -0.25
GRIK3-201ENST00000373091 AKAP17AQ02040 695 aaKnown RBP13.49□□□□□ -0.25
GRIK3-201ENST00000373091 NAT10Q9H0A0 1025 aaKnown RBP13.49□□□□□ -0.25
GRIK3-201ENST00000373091 PDE4AP27815 886 aa13.49□□□□□ -0.25
GRIK3-201ENST00000373091 RUFY1Q96T51 708 aa13.49□□□□□ -0.25
GRIK3-201ENST00000373091 SOX12O15370 315 aa13.49□□□□□ -0.25
GRIK3-201ENST00000373091 RRP1P56182 461 aaKnown RBP13.49□□□□□ -0.25
GRIK3-201ENST00000373091 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
GRIK3-201ENST00000373091 RRP12Q5JTH9 1297 aaKnown RBP13.48□□□□□ -0.25
GRIK3-201ENST00000373091 FAM43AQ8N2R8 423 aa13.48□□□□□ -0.25
GRIK3-201ENST00000373091 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
GRIK3-201ENST00000373091 ZKSCAN1P17029 563 aaPredicted RBP13.48□□□□□ -0.25
GRIK3-201ENST00000373091 HSP90B2PQ58FF3 399 aa13.48□□□□□ -0.25
GRIK3-201ENST00000373091 SAFB2Q14151 953 aaKnown RBP eCLIP13.47□□□□□ -0.25
GRIK3-201ENST00000373091 DIAPH3Q9NSV4 1193 aa13.47□□□□□ -0.25
GRIK3-201ENST00000373091 RAPGEF2Q9Y4G8 1499 aa13.47□□□□□ -0.25
GRIK3-201ENST00000373091 SUPT6HQ7KZ85 1726 aaKnown RBP13.46□□□□□ -0.25
GRIK3-201ENST00000373091 CPLX2Q6PUV4 134 aaKnown RBP13.46□□□□□ -0.25
GRIK3-201ENST00000373091 DDX19BQ9UMR2 479 aa13.46□□□□□ -0.25
GRIK3-201ENST00000373091 ZKSCAN2Q63HK3 967 aa13.46□□□□□ -0.25
GRIK3-201ENST00000373091 USP47Q96K76 1375 aa13.46□□□□□ -0.25
GRIK3-201ENST00000373091 NOL8Q76FK4 1167 aaKnown RBP13.46□□□□□ -0.25
GRIK3-201ENST00000373091 NUCB2P80303 420 aa13.46□□□□□ -0.26
GRIK3-201ENST00000373091 DCTN1Q14203 1278 aa13.46□□□□□ -0.26
GRIK3-201ENST00000373091 RNF20Q5VTR2 975 aa13.46□□□□□ -0.26
GRIK3-201ENST00000373091 HOMER1Q86YM7 354 aa13.45□□□□□ -0.26
GRIK3-201ENST00000373091 SLC4A10Q6U841 1118 aa13.45□□□□□ -0.26
GRIK3-201ENST00000373091 TRIM29Q14134 588 aa13.45□□□□□ -0.26
GRIK3-201ENST00000373091 CCDC66A2RUB6 948 aa13.45□□□□□ -0.26
GRIK3-201ENST00000373091 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
GRIK3-201ENST00000373091 MARCH6O60337 910 aa13.44□□□□□ -0.26
GRIK3-201ENST00000373091 CCDC39Q9UFE4 941 aa13.44□□□□□ -0.26
GRIK3-201ENST00000373091 SYNE3Q6ZMZ3 975 aa13.44□□□□□ -0.26
GRIK3-201ENST00000373091 CCDC47Q96A33 483 aaKnown RBP13.44□□□□□ -0.26
GRIK3-201ENST00000373091 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
GRIK3-201ENST00000373091 ZNF592Q92610 1267 aa13.44□□□□□ -0.26
GRIK3-201ENST00000373091 MYO6Q9UM54 1294 aa13.44□□□□□ -0.26
GRIK3-201ENST00000373091 CCP110O43303 1012 aa13.43□□□□□ -0.26
GRIK3-201ENST00000373091 VPS53Q5VIR6 699 aa13.43□□□□□ -0.26
GRIK3-201ENST00000373091 STK26Q9P289 416 aa13.43□□□□□ -0.26
GRIK3-201ENST00000373091 FAM13BQ9NYF5 915 aa13.43□□□□□ -0.26
GRIK3-201ENST00000373091 TCEAL9Q9UHQ7 104 aa13.43□□□□□ -0.26
GRIK3-201ENST00000373091 PDS5BQ9NTI5 1447 aa13.43□□□□□ -0.26
GRIK3-201ENST00000373091 DHX8Q14562 1220 aaKnown RBP13.43□□□□□ -0.26
GRIK3-201ENST00000373091 AMOTL1Q8IY63 956 aa13.43□□□□□ -0.26
GRIK3-201ENST00000373091 MCTP1Q6DN14 999 aa13.42□□□□□ -0.26
GRIK3-201ENST00000373091 KIF7Q2M1P5 1343 aa13.42□□□□□ -0.26
GRIK3-201ENST00000373091 MROH2BQ7Z745 1585 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms