RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 CARD11Q9BXL7 1154 aa14.68□□□□□ -0.06
LCN2-202ENST00000372998 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
LCN2-202ENST00000372998 MYBBP1AQ9BQG0 1328 aaKnown RBP14.67□□□□□ -0.06
LCN2-202ENST00000372998 PDE3BQ13370 1112 aa14.67□□□□□ -0.06
LCN2-202ENST00000372998 PLXNC1O60486 1568 aa14.67□□□□□ -0.06
LCN2-202ENST00000372998 TRPM1Q7Z4N2 1603 aa14.66□□□□□ -0.06
LCN2-202ENST00000372998 CCDC184Q52MB2 194 aa14.65□□□□□ -0.06
LCN2-202ENST00000372998 CDC42BPBQ9Y5S2 1711 aa14.65□□□□□ -0.06
LCN2-202ENST00000372998 FAM135AQ9P2D6 1515 aa14.65□□□□□ -0.06
LCN2-202ENST00000372998 LRPPRCP42704 1394 aaKnown RBP14.64□□□□□ -0.07
LCN2-202ENST00000372998 STAC3Q96MF2 364 aa14.64□□□□□ -0.07
LCN2-202ENST00000372998 IQGAP3Q86VI3 1631 aa14.63□□□□□ -0.07
LCN2-202ENST00000372998 PNISRQ8TF01 805 aaKnown RBP14.63□□□□□ -0.07
LCN2-202ENST00000372998 CCDC144AA2RUR9 1427 aa14.63□□□□□ -0.07
LCN2-202ENST00000372998 SAMD9LQ8IVG5 1584 aa14.63□□□□□ -0.07
LCN2-202ENST00000372998 MYO5CQ9NQX4 1742 aa14.62□□□□□ -0.07
LCN2-202ENST00000372998 GPRASP1Q5JY77 1395 aa14.61□□□□□ -0.07
LCN2-202ENST00000372998 ATP10AO60312 1499 aa14.61□□□□□ -0.07
LCN2-202ENST00000372998 ZNF326Q5BKZ1 582 aaKnown RBP14.6□□□□□ -0.07
LCN2-202ENST00000372998 DUOX2Q9NRD8 1548 aa14.6□□□□□ -0.07
LCN2-202ENST00000372998 PRAG1Q86YV5 1406 aa14.59□□□□□ -0.07
LCN2-202ENST00000372998 IRX6P78412 446 aaPredicted RBP14.59□□□□□ -0.07
LCN2-202ENST00000372998 FBLN2P98095 1184 aa14.59□□□□□ -0.07
LCN2-202ENST00000372998 NLRP13Q86W25 1043 aa14.59□□□□□ -0.07
LCN2-202ENST00000372998 CCDC136Q96JN2 1154 aa14.59□□□□□ -0.07
LCN2-202ENST00000372998 SHROOM2Q13796 1616 aa14.59□□□□□ -0.07
LCN2-202ENST00000372998 SLC24A1O60721 1099 aa14.58□□□□□ -0.08
LCN2-202ENST00000372998 ERBINQ96RT1 1412 aa14.58□□□□□ -0.08
LCN2-202ENST00000372998 PRDM15P57071 1507 aaPredicted RBP14.57□□□□□ -0.08
LCN2-202ENST00000372998 DCAF11Q8TEB1 546 aa14.56□□□□□ -0.08
LCN2-202ENST00000372998 POLR3GLQ9BT43 218 aa14.56□□□□□ -0.08
LCN2-202ENST00000372998 PARD3Q8TEW0 1356 aa14.56□□□□□ -0.08
LCN2-202ENST00000372998 MAGI2Q86UL8 1455 aa14.56□□□□□ -0.08
LCN2-202ENST00000372998 ARHGAP5Q13017 1502 aa14.56□□□□□ -0.08
LCN2-202ENST00000372998 B4GALNT3Q6L9W6 998 aa14.55□□□□□ -0.08
LCN2-202ENST00000372998 ST20-MTHFSA0A0A6YYL1 179 aa14.54□□□□□ -0.08
LCN2-202ENST00000372998 ANP32AP39687 249 aaKnown RBP14.54□□□□□ -0.08
LCN2-202ENST00000372998 COL17A1Q9UMD9 1497 aaPredicted RBP14.54□□□□□ -0.08
LCN2-202ENST00000372998 RNF17Q9BXT8 1623 aaKnown RBP14.52□□□□□ -0.08
LCN2-202ENST00000372998 ABCC2Q92887 1545 aa14.52□□□□□ -0.08
LCN2-202ENST00000372998 HNRNPMP52272 730 aaKnown RBP eCLIP14.52□□□□□ -0.09
LCN2-202ENST00000372998 CDCA8Q53HL2 280 aa14.52□□□□□ -0.09
LCN2-202ENST00000372998 ARAP3Q8WWN8 1544 aa14.51□□□□□ -0.09
LCN2-202ENST00000372998 SYCP2Q9BX26 1530 aa14.51□□□□□ -0.09
LCN2-202ENST00000372998 MSH5O43196 834 aa14.51□□□□□ -0.09
LCN2-202ENST00000372998 TMF1P82094 1093 aa14.51□□□□□ -0.09
LCN2-202ENST00000372998 TCERG1O14776 1098 aaKnown RBP14.5□□□□□ -0.09
LCN2-202ENST00000372998 NEURL4Q96JN8 1562 aa14.5□□□□□ -0.09
LCN2-202ENST00000372998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.5□□□□□ -0.09
LCN2-202ENST00000372998 CHD1O14646 1710 aa14.49□□□□□ -0.09
LCN2-202ENST00000372998 MS4A1P11836 297 aa14.49□□□□□ -0.09
LCN2-202ENST00000372998 KDM2AQ9Y2K7 1162 aa14.49□□□□□ -0.09
LCN2-202ENST00000372998 NOP58Q9Y2X3 529 aaKnown RBP14.49□□□□□ -0.09
LCN2-202ENST00000372998 RRP1P56182 461 aaKnown RBP14.48□□□□□ -0.09
LCN2-202ENST00000372998 UHRF1BP1LA0JNW5 1464 aa14.48□□□□□ -0.09
LCN2-202ENST00000372998 A2MP01023 1474 aa14.48□□□□□ -0.09
LCN2-202ENST00000372998 TTC37Q6PGP7 1564 aa14.47□□□□□ -0.09
LCN2-202ENST00000372998 KIAA1210Q9ULL0 1709 aa14.47□□□□□ -0.09
LCN2-202ENST00000372998 RCAN3Q9UKA8 241 aa14.47□□□□□ -0.09
LCN2-202ENST00000372998 RTEL1-TNFRSF6BF6WH68 1400 aa14.47□□□□□ -0.09
LCN2-202ENST00000372998 BLMP54132 1417 aaPredicted RBP14.47□□□□□ -0.09
LCN2-202ENST00000372998 PLCH2O75038 1416 aa14.45□□□□□ -0.1
LCN2-202ENST00000372998 CEP152O94986 1710 aa14.45□□□□□ -0.1
LCN2-202ENST00000372998 EFCAB2Q5VUJ9 269 aa14.45□□□□□ -0.1
LCN2-202ENST00000372998 NGEFQ8N5V2 710 aa14.44□□□□□ -0.1
LCN2-202ENST00000372998 IQGAP1P46940 1657 aa14.44□□□□□ -0.1
LCN2-202ENST00000372998 SPHKAPQ2M3C7 1700 aa14.44□□□□□ -0.1
LCN2-202ENST00000372998 SCAPERQ9BY12 1400 aa14.43□□□□□ -0.1
LCN2-202ENST00000372998 ABCC1P33527 1531 aa14.43□□□□□ -0.1
LCN2-202ENST00000372998 PER1O15534 1290 aaPredicted RBP14.43□□□□□ -0.1
LCN2-202ENST00000372998 IPO9Q96P70 1041 aaKnown RBP14.43□□□□□ -0.1
LCN2-202ENST00000372998 PLA2R1Q13018 1463 aa14.43□□□□□ -0.1
LCN2-202ENST00000372998 SYNMO15061 1565 aa14.43□□□□□ -0.1
LCN2-202ENST00000372998 EIF3AQ14152 1382 aaKnown RBP14.42□□□□□ -0.1
LCN2-202ENST00000372998 NPC1L1Q9UHC9 1359 aa14.42□□□□□ -0.1
LCN2-202ENST00000372998 TRPM2O94759 1503 aa14.41□□□□□ -0.1
LCN2-202ENST00000372998 CLASP1Q7Z460 1538 aa14.41□□□□□ -0.1
LCN2-202ENST00000372998 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
LCN2-202ENST00000372998 WDR7Q9Y4E6 1490 aa14.41□□□□□ -0.1
LCN2-202ENST00000372998 TET3O43151 1660 aa14.4□□□□□ -0.1
LCN2-202ENST00000372998 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.4□□□□□ -0.1
LCN2-202ENST00000372998 DEPDC5O75140 1603 aa14.4□□□□□ -0.1
LCN2-202ENST00000372998 MADDQ8WXG6 1647 aa14.4□□□□□ -0.1
LCN2-202ENST00000372998 KANK1Q14678 1352 aa14.39□□□□□ -0.11
LCN2-202ENST00000372998 TESK2Q96S53 571 aa14.39□□□□□ -0.11
LCN2-202ENST00000372998 ZCCHC11Q5TAX3 1644 aaKnown RBP14.39□□□□□ -0.11
LCN2-202ENST00000372998 SCAF11Q99590 1463 aaKnown RBP14.38□□□□□ -0.11
LCN2-202ENST00000372998 DDRGK1Q96HY6 314 aa14.37□□□□□ -0.11
LCN2-202ENST00000372998 PTPRTO14522 1441 aa14.36□□□□□ -0.11
LCN2-202ENST00000372998 PIK3C2GO75747 1445 aa14.36□□□□□ -0.11
LCN2-202ENST00000372998 RTL5Q5HYW3 569 aaPredicted RBP14.36□□□□□ -0.11
LCN2-202ENST00000372998 KDM5AP29375 1690 aaKnown RBP14.36□□□□□ -0.11
LCN2-202ENST00000372998 BCL11AQ9H165 835 aa14.35□□□□□ -0.11
LCN2-202ENST00000372998 KNSTRNQ9Y448 316 aa14.35□□□□□ -0.11
LCN2-202ENST00000372998 WDR43Q15061 677 aaKnown RBP eCLIP14.34□□□□□ -0.11
LCN2-202ENST00000372998 RGL3Q3MIN7 710 aa14.34□□□□□ -0.11
LCN2-202ENST00000372998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
LCN2-202ENST00000372998 PANK3Q9H999 370 aa14.34□□□□□ -0.11
LCN2-202ENST00000372998 USP35Q9P2H5 1018 aa14.34□□□□□ -0.11
LCN2-202ENST00000372998 ASXL1Q8IXJ9 1541 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms