RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 SKOR2Q2VWA4 1001 aaPredicted RBP14.13□□□□□ -0.15
SYNPO2L-201ENST00000372873 TNNT3P45378 269 aaPredicted RBP14.13□□□□□ -0.15
SYNPO2L-201ENST00000372873 MPHOSPH9Q99550 1183 aa14.13□□□□□ -0.15
SYNPO2L-201ENST00000372873 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.13□□□□□ -0.15
SYNPO2L-201ENST00000372873 MAPK8IP3Q9UPT6 1336 aa14.13□□□□□ -0.15
SYNPO2L-201ENST00000372873 FTSJ3Q8IY81 847 aaKnown RBP14.13□□□□□ -0.15
SYNPO2L-201ENST00000372873 DNAJC5BQ9UF47 199 aa14.12□□□□□ -0.15
SYNPO2L-201ENST00000372873 MYBBP1AQ9BQG0 1328 aaKnown RBP14.12□□□□□ -0.15
SYNPO2L-201ENST00000372873 TSPY4P0CV99 314 aa14.11□□□□□ -0.15
SYNPO2L-201ENST00000372873 TSPY10P0CW01 314 aa14.11□□□□□ -0.15
SYNPO2L-201ENST00000372873 CSPP1Q1MSJ5 1256 aa14.11□□□□□ -0.15
SYNPO2L-201ENST00000372873 UQCRHLA0A096LP55 91 aa14.1□□□□□ -0.15
SYNPO2L-201ENST00000372873 UQCRHP07919 91 aa14.1□□□□□ -0.15
SYNPO2L-201ENST00000372873 GOLGA2Q08379 1002 aa14.1□□□□□ -0.15
SYNPO2L-201ENST00000372873 PNISRQ8TF01 805 aaKnown RBP14.1□□□□□ -0.15
SYNPO2L-201ENST00000372873 KNSTRNQ9Y448 316 aa14.09□□□□□ -0.15
SYNPO2L-201ENST00000372873 PLEKHD1A6NEE1 506 aa14.08□□□□□ -0.16
SYNPO2L-201ENST00000372873 CCDC173Q0VFZ6 552 aa14.08□□□□□ -0.16
SYNPO2L-201ENST00000372873 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
SYNPO2L-201ENST00000372873 ZSCAN30Q86W11 494 aa14.07□□□□□ -0.16
SYNPO2L-201ENST00000372873 ISY1Q9ULR0 285 aaKnown RBP14.07□□□□□ -0.16
SYNPO2L-201ENST00000372873 CC2D2AQ9P2K1 1620 aa14.07□□□□□ -0.16
SYNPO2L-201ENST00000372873 RWDD1Q9H446 243 aaPredicted RBP14.07□□□□□ -0.16
SYNPO2L-201ENST00000372873 RGL3Q3MIN7 710 aa14.06□□□□□ -0.16
SYNPO2L-201ENST00000372873 PMFBP1Q8TBY8 1022 aa14.06□□□□□ -0.16
SYNPO2L-201ENST00000372873 KIF15Q9NS87 1388 aa14.06□□□□□ -0.16
SYNPO2L-201ENST00000372873 GAPVD1Q14C86 1478 aa14.06□□□□□ -0.16
SYNPO2L-201ENST00000372873 BIVM-ERCC5R4GMW8 1640 aa14.05□□□□□ -0.16
SYNPO2L-201ENST00000372873 POLA1P09884 1462 aaPredicted RBP14.05□□□□□ -0.16
SYNPO2L-201ENST00000372873 COG6Q9Y2V7 657 aa14.04□□□□□ -0.16
SYNPO2L-201ENST00000372873 CLUAP1Q96AJ1 413 aa14.03□□□□□ -0.16
SYNPO2L-201ENST00000372873 FGD6Q6ZV73 1430 aa14.03□□□□□ -0.16
SYNPO2L-201ENST00000372873 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
SYNPO2L-201ENST00000372873 ERCC6Q03468 1493 aa14.03□□□□□ -0.16
SYNPO2L-201ENST00000372873 CCDC18Q5T9S5 1454 aa14.02□□□□□ -0.16
SYNPO2L-201ENST00000372873 FGD1P98174 961 aa14.02□□□□□ -0.17
SYNPO2L-201ENST00000372873 C22orf23Q9BZE7 217 aa14.02□□□□□ -0.17
SYNPO2L-201ENST00000372873 TIAM1Q13009 1591 aa14.02□□□□□ -0.17
SYNPO2L-201ENST00000372873 PDIA4P13667 645 aaKnown RBP14.01□□□□□ -0.17
SYNPO2L-201ENST00000372873 AAMPQ13685 434 aa14.01□□□□□ -0.17
SYNPO2L-201ENST00000372873 ROCK2O75116 1388 aaKnown RBP14.01□□□□□ -0.17
SYNPO2L-201ENST00000372873 CBX1P83916 185 aa14□□□□□ -0.17
SYNPO2L-201ENST00000372873 CASKIN1Q8WXD9 1431 aa14□□□□□ -0.17
SYNPO2L-201ENST00000372873 AQRO60306 1485 aaKnown RBP eCLIP14□□□□□ -0.17
SYNPO2L-201ENST00000372873 C20orf194Q5TEA3 1177 aa13.99□□□□□ -0.17
SYNPO2L-201ENST00000372873 CGNL1Q0VF96 1302 aa13.99□□□□□ -0.17
SYNPO2L-201ENST00000372873 XPCQ01831 940 aaPredicted RBP13.99□□□□□ -0.17
SYNPO2L-201ENST00000372873 ST20-MTHFSA0A0A6YYL1 179 aa13.98□□□□□ -0.17
SYNPO2L-201ENST00000372873 CCDC146Q8IYE0 955 aa13.98□□□□□ -0.17
SYNPO2L-201ENST00000372873 BCL11BQ9C0K0 894 aaPredicted RBP13.98□□□□□ -0.17
SYNPO2L-201ENST00000372873 ZNF644Q9H582 1327 aaPredicted RBP13.98□□□□□ -0.17
SYNPO2L-201ENST00000372873 UACAQ9BZF9 1416 aa13.97□□□□□ -0.17
SYNPO2L-201ENST00000372873 PKD2Q13563 968 aa13.97□□□□□ -0.17
SYNPO2L-201ENST00000372873 SENP3Q9H4L4 574 aaPredicted RBP13.96□□□□□ -0.17
SYNPO2L-201ENST00000372873 USP47Q96K76 1375 aa13.96□□□□□ -0.17
SYNPO2L-201ENST00000372873 TBC1D2Q9BYX2 928 aa13.96□□□□□ -0.17
SYNPO2L-201ENST00000372873 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
SYNPO2L-201ENST00000372873 RNF214Q8ND24 703 aa13.95□□□□□ -0.18
SYNPO2L-201ENST00000372873 CGNQ9P2M7 1197 aaKnown RBP13.95□□□□□ -0.18
SYNPO2L-201ENST00000372873 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
SYNPO2L-201ENST00000372873 C8orf34Q49A92 452 aa13.95□□□□□ -0.18
SYNPO2L-201ENST00000372873 NCOA2Q15596 1464 aa13.95□□□□□ -0.18
SYNPO2L-201ENST00000372873 MYOM3Q5VTT5 1437 aa13.95□□□□□ -0.18
SYNPO2L-201ENST00000372873 BRD4O60885 1362 aaPredicted RBP13.95□□□□□ -0.18
SYNPO2L-201ENST00000372873 CAVIN1Q6NZI2 390 aaKnown RBP13.95□□□□□ -0.18
SYNPO2L-201ENST00000372873 FOXD4L5Q5VV16 416 aaPredicted RBP13.94□□□□□ -0.18
SYNPO2L-201ENST00000372873 FOXD4L4Q8WXT5 416 aaPredicted RBP13.94□□□□□ -0.18
SYNPO2L-201ENST00000372873 FYCO1Q9BQS8 1478 aa13.94□□□□□ -0.18
SYNPO2L-201ENST00000372873 CCDC39Q9UFE4 941 aa13.94□□□□□ -0.18
SYNPO2L-201ENST00000372873 DRC7Q8IY82 874 aa13.94□□□□□ -0.18
SYNPO2L-201ENST00000372873 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
SYNPO2L-201ENST00000372873 MCTP1Q6DN14 999 aa13.93□□□□□ -0.18
SYNPO2L-201ENST00000372873 SYAP1Q96A49 352 aaPredicted RBP13.93□□□□□ -0.18
SYNPO2L-201ENST00000372873 SMAP1Q8IYB5 467 aaPredicted RBP13.93□□□□□ -0.18
SYNPO2L-201ENST00000372873 PCF11O94913 1555 aaKnown RBP13.93□□□□□ -0.18
SYNPO2L-201ENST00000372873 HMGN5P82970 282 aaKnown RBP13.93□□□□□ -0.18
SYNPO2L-201ENST00000372873 CHMP4BQ9H444 224 aaKnown RBP13.93□□□□□ -0.18
SYNPO2L-201ENST00000372873 NAP1L2Q9ULW6 460 aaPredicted RBP13.93□□□□□ -0.18
SYNPO2L-201ENST00000372873 BCL2L13Q9BXK5 485 aa13.92□□□□□ -0.18
SYNPO2L-201ENST00000372873 NBPF8Q3BBV2 869 aa13.92□□□□□ -0.18
SYNPO2L-201ENST00000372873 MPNDQ8N594 471 aa13.92□□□□□ -0.18
SYNPO2L-201ENST00000372873 PANK1Q8TE04 598 aa13.91□□□□□ -0.18
SYNPO2L-201ENST00000372873 DNMBPQ6XZF7 1577 aa13.91□□□□□ -0.18
SYNPO2L-201ENST00000372873 RNF123Q5XPI4 1314 aa13.91□□□□□ -0.18
SYNPO2L-201ENST00000372873 DYNC1I1O14576 645 aa13.91□□□□□ -0.18
SYNPO2L-201ENST00000372873 OFD1O75665 1012 aa13.91□□□□□ -0.18
SYNPO2L-201ENST00000372873 TMF1P82094 1093 aa13.91□□□□□ -0.18
SYNPO2L-201ENST00000372873 CASC1Q6TDU7 716 aa13.91□□□□□ -0.18
SYNPO2L-201ENST00000372873 ABCA10Q8WWZ4 1543 aa13.9□□□□□ -0.18
SYNPO2L-201ENST00000372873 CCDC66A2RUB6 948 aa13.9□□□□□ -0.18
SYNPO2L-201ENST00000372873 JPH4Q96JJ6 628 aa13.9□□□□□ -0.18
SYNPO2L-201ENST00000372873 SASS6Q6UVJ0 657 aa13.89□□□□□ -0.19
SYNPO2L-201ENST00000372873 TAF3Q5VWG9 929 aa13.89□□□□□ -0.19
SYNPO2L-201ENST00000372873 ITPRIPQ8IWB1 547 aa13.89□□□□□ -0.19
SYNPO2L-201ENST00000372873 CHGAP10645 457 aaKnown RBP13.88□□□□□ -0.19
SYNPO2L-201ENST00000372873 APAF1O14727 1248 aa13.88□□□□□ -0.19
SYNPO2L-201ENST00000372873 HNRNPMP52272 730 aaKnown RBP eCLIP13.87□□□□□ -0.19
SYNPO2L-201ENST00000372873 ADAMTS8Q9UP79 889 aa13.87□□□□□ -0.19
SYNPO2L-201ENST00000372873 FOXD4L6Q3SYB3 417 aaPredicted RBP13.87□□□□□ -0.19
SYNPO2L-201ENST00000372873 FOXD4L3Q6VB84 417 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms