RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 ABCA8O94911 1581 aa19.8■□□□□ 0.76
COL9A2-202ENST00000372748 DCAF11Q8TEB1 546 aa19.8■□□□□ 0.76
COL9A2-202ENST00000372748 LAS1LQ9Y4W2 734 aaKnown RBP19.79■□□□□ 0.76
COL9A2-202ENST00000372748 KIF15Q9NS87 1388 aa19.78■□□□□ 0.76
COL9A2-202ENST00000372748 RRP1P56182 461 aaKnown RBP19.77■□□□□ 0.76
COL9A2-202ENST00000372748 ST20-MTHFSA0A0A6YYL1 179 aa19.77■□□□□ 0.76
COL9A2-202ENST00000372748 KDM5CP41229 1560 aa19.76■□□□□ 0.75
COL9A2-202ENST00000372748 PRKCSHP14314 528 aaPredicted RBP19.76■□□□□ 0.75
COL9A2-202ENST00000372748 IL27Q8NEV9 243 aa19.75■□□□□ 0.75
COL9A2-202ENST00000372748 PTPRGP23470 1445 aa19.74■□□□□ 0.75
COL9A2-202ENST00000372748 PDE4AP27815 886 aa19.73■□□□□ 0.75
COL9A2-202ENST00000372748 RCAN3Q9UKA8 241 aa19.73■□□□□ 0.75
COL9A2-202ENST00000372748 ANO8Q9HCE9 1232 aaPredicted RBP19.73■□□□□ 0.75
COL9A2-202ENST00000372748 RTN4Q9NQC3 1192 aaKnown RBP19.73■□□□□ 0.75
COL9A2-202ENST00000372748 SHANK2Q9UPX8 1470 aa19.72■□□□□ 0.75
COL9A2-202ENST00000372748 RGL3Q3MIN7 710 aa19.72■□□□□ 0.75
COL9A2-202ENST00000372748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.72■□□□□ 0.752e-6■■□□□ 11.7
COL9A2-202ENST00000372748 NEFMP07197 916 aa19.72■□□□□ 0.75
COL9A2-202ENST00000372748 UHRF1BP1Q6BDS2 1440 aa19.71■□□□□ 0.75
COL9A2-202ENST00000372748 RALGAPBQ86X10 1494 aa19.71■□□□□ 0.75
COL9A2-202ENST00000372748 SKAP1Q86WV1 359 aa19.7■□□□□ 0.74
COL9A2-202ENST00000372748 TCERG1O14776 1098 aaKnown RBP19.7■□□□□ 0.74
COL9A2-202ENST00000372748 ARID4BQ4LE39 1312 aaPredicted RBP19.7■□□□□ 0.74
COL9A2-202ENST00000372748 LRPPRCP42704 1394 aaKnown RBP19.7■□□□□ 0.74
COL9A2-202ENST00000372748 MYBBP1AQ9BQG0 1328 aaKnown RBP19.69■□□□□ 0.74
COL9A2-202ENST00000372748 ROCK2O75116 1388 aaKnown RBP19.68■□□□□ 0.74
COL9A2-202ENST00000372748 CDCA7LQ96GN5 454 aa19.67■□□□□ 0.74
COL9A2-202ENST00000372748 BACH2Q9BYV9 841 aa19.67■□□□□ 0.74
COL9A2-202ENST00000372748 PLIN1O60240 522 aa19.66■□□□□ 0.74
COL9A2-202ENST00000372748 BRD4O60885 1362 aaPredicted RBP19.66■□□□□ 0.74
COL9A2-202ENST00000372748 SAMD9LQ8IVG5 1584 aa19.65■□□□□ 0.74
COL9A2-202ENST00000372748 CCDC141Q6ZP82 1450 aa19.64■□□□□ 0.74
COL9A2-202ENST00000372748 KDM5DQ9BY66 1539 aa19.64■□□□□ 0.73
COL9A2-202ENST00000372748 RALBP1Q15311 655 aa19.64■□□□□ 0.73
COL9A2-202ENST00000372748 NBPF1Q3BBV0 1214 aa19.64■□□□□ 0.73
COL9A2-202ENST00000372748 ARHGEF12Q9NZN5 1544 aa19.64■□□□□ 0.73
COL9A2-202ENST00000372748 CDC42BPBQ9Y5S2 1711 aa19.63■□□□□ 0.73
COL9A2-202ENST00000372748 CHD1O14646 1710 aa19.63■□□□□ 0.73
COL9A2-202ENST00000372748 FAM135AQ9P2D6 1515 aa19.63■□□□□ 0.73
COL9A2-202ENST00000372748 ARHGEF5Q12774 1597 aa19.62■□□□□ 0.73
COL9A2-202ENST00000372748 CCDC144AA2RUR9 1427 aa19.6■□□□□ 0.73
COL9A2-202ENST00000372748 SYCP2Q9BX26 1530 aa19.6■□□□□ 0.73
COL9A2-202ENST00000372748 NLRP13Q86W25 1043 aa19.58■□□□□ 0.73
COL9A2-202ENST00000372748 ARHGAP5Q13017 1502 aa19.58■□□□□ 0.73
COL9A2-202ENST00000372748 RSPH4AQ5TD94 716 aa19.58■□□□□ 0.72
COL9A2-202ENST00000372748 MS4A1P11836 297 aa19.58■□□□□ 0.72
COL9A2-202ENST00000372748 PREX2Q70Z35 1606 aa19.57■□□□□ 0.72
COL9A2-202ENST00000372748 CRBNQ96SW2 442 aa19.56■□□□□ 0.72
COL9A2-202ENST00000372748 CC2D1BQ5T0F9 858 aaKnown RBP19.55■□□□□ 0.72
COL9A2-202ENST00000372748 USP35Q9P2H5 1018 aa19.55■□□□□ 0.72
COL9A2-202ENST00000372748 TTC37Q6PGP7 1564 aa19.55■□□□□ 0.72
COL9A2-202ENST00000372748 PRAG1Q86YV5 1406 aa19.55■□□□□ 0.72
COL9A2-202ENST00000372748 SLC4A3P48751 1232 aa19.54■□□□□ 0.72
COL9A2-202ENST00000372748 PDE3BQ13370 1112 aa19.54■□□□□ 0.72
COL9A2-202ENST00000372748 KTN1Q86UP2 1357 aaKnown RBP19.54■□□□□ 0.72
COL9A2-202ENST00000372748 PLA2R1Q13018 1463 aa19.54■□□□□ 0.72
COL9A2-202ENST00000372748 PLEKHH2Q8IVE3 1493 aa19.53■□□□□ 0.72
COL9A2-202ENST00000372748 PPM1GO15355 546 aaPredicted RBP19.53■□□□□ 0.72
COL9A2-202ENST00000372748 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.52■□□□□ 0.72
COL9A2-202ENST00000372748 ERCC6L2Q5T890 1561 aa19.52■□□□□ 0.71
COL9A2-202ENST00000372748 PARD3Q8TEW0 1356 aa19.5■□□□□ 0.71
COL9A2-202ENST00000372748 C20orf194Q5TEA3 1177 aa19.5■□□□□ 0.71
COL9A2-202ENST00000372748 A2MP01023 1474 aa19.49■□□□□ 0.71
COL9A2-202ENST00000372748 TRPM1Q7Z4N2 1603 aa19.49■□□□□ 0.71
COL9A2-202ENST00000372748 PER1O15534 1290 aaPredicted RBP19.48■□□□□ 0.71
COL9A2-202ENST00000372748 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.48■□□□□ 0.71
COL9A2-202ENST00000372748 DISP3Q9P2K9 1392 aa19.47■□□□□ 0.71
COL9A2-202ENST00000372748 BRPF3Q9ULD4 1205 aa19.47■□□□□ 0.71
COL9A2-202ENST00000372748 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
COL9A2-202ENST00000372748 WASHC2CQ9Y4E1 1318 aa19.46■□□□□ 0.71
COL9A2-202ENST00000372748 E9PCH4 1651 aa19.45■□□□□ 0.7
COL9A2-202ENST00000372748 DDRGK1Q96HY6 314 aa19.45■□□□□ 0.7
COL9A2-202ENST00000372748 TESK2Q96S53 571 aa19.45■□□□□ 0.7
COL9A2-202ENST00000372748 PANK3Q9H999 370 aa19.45■□□□□ 0.7
COL9A2-202ENST00000372748 NFKBIBQ15653 356 aa19.44■□□□□ 0.7
COL9A2-202ENST00000372748 UNC13BO14795 1591 aa19.44■□□□□ 0.7
COL9A2-202ENST00000372748 GSE1Q14687 1217 aa19.42■□□□□ 0.7
COL9A2-202ENST00000372748 MYO5CQ9NQX4 1742 aa19.41■□□□□ 0.7
COL9A2-202ENST00000372748 MAST1Q9Y2H9 1570 aa19.41■□□□□ 0.7
COL9A2-202ENST00000372748 DAXXQ9UER7 740 aaPredicted RBP19.41■□□□□ 0.7
COL9A2-202ENST00000372748 GPRASP1Q5JY77 1395 aa19.41■□□□□ 0.7
COL9A2-202ENST00000372748 ABCC2Q92887 1545 aa19.41■□□□□ 0.7
COL9A2-202ENST00000372748 EFCAB2Q5VUJ9 269 aa19.4■□□□□ 0.7
COL9A2-202ENST00000372748 TMF1P82094 1093 aa19.39■□□□□ 0.69
COL9A2-202ENST00000372748 ERBINQ96RT1 1412 aa19.39■□□□□ 0.69
COL9A2-202ENST00000372748 COL17A1Q9UMD9 1497 aaPredicted RBP19.39■□□□□ 0.69
COL9A2-202ENST00000372748 IQGAP3Q86VI3 1631 aa19.38■□□□□ 0.69
COL9A2-202ENST00000372748 ADAMTS8Q9UP79 889 aa19.38■□□□□ 0.69
COL9A2-202ENST00000372748 AFAP1Q8N556 730 aa19.38■□□□□ 0.69
COL9A2-202ENST00000372748 SHROOM2Q13796 1616 aa19.37■□□□□ 0.69
COL9A2-202ENST00000372748 DUOX2Q9NRD8 1548 aa19.37■□□□□ 0.69
COL9A2-202ENST00000372748 TRAPPC8Q9Y2L5 1435 aa19.37■□□□□ 0.69
COL9A2-202ENST00000372748 FRAT1Q92837 279 aaPredicted RBP19.37■□□□□ 0.69
COL9A2-202ENST00000372748 PLXNC1O60486 1568 aa19.36■□□□□ 0.69
COL9A2-202ENST00000372748 BLMP54132 1417 aaPredicted RBP19.36■□□□□ 0.69
COL9A2-202ENST00000372748 PRDM15P57071 1507 aaPredicted RBP19.36■□□□□ 0.69
COL9A2-202ENST00000372748 KDM2BQ8NHM5 1336 aa19.36■□□□□ 0.69
COL9A2-202ENST00000372748 PLCH2O75038 1416 aa19.36■□□□□ 0.69
COL9A2-202ENST00000372748 RGS3P49796 1198 aa19.35■□□□□ 0.69
COL9A2-202ENST00000372748 C8orf34Q49A92 452 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms