RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 FTSJ3Q8IY81 847 aaKnown RBP14.68□□□□□ -0.06
PTCH2-201ENST00000372192 L1TD1Q5T7N2 865 aaKnown RBP14.67□□□□□ -0.06
PTCH2-201ENST00000372192 TROQ12816 1431 aaPredicted RBP14.67□□□□□ -0.06
PTCH2-201ENST00000372192 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.67□□□□□ -0.06
PTCH2-201ENST00000372192 TCOF1Q13428 1488 aaKnown RBP14.67□□□□□ -0.06
PTCH2-201ENST00000372192 CTTNBP2Q8WZ74 1663 aa14.66□□□□□ -0.06
PTCH2-201ENST00000372192 NFKBIBQ15653 356 aa14.66□□□□□ -0.06
PTCH2-201ENST00000372192 CCDC146Q8IYE0 955 aa14.66□□□□□ -0.06
PTCH2-201ENST00000372192 SLKQ9H2G2 1235 aaPredicted RBP14.65□□□□□ -0.06
PTCH2-201ENST00000372192 IQGAP2Q13576 1575 aa14.65□□□□□ -0.06
PTCH2-201ENST00000372192 PRG4Q92954 1404 aaPredicted RBP14.65□□□□□ -0.06
PTCH2-201ENST00000372192 TNNT2P45379 298 aaPredicted RBP14.65□□□□□ -0.07
PTCH2-201ENST00000372192 ERCC6Q03468 1493 aa14.64□□□□□ -0.07
PTCH2-201ENST00000372192 IL27Q8NEV9 243 aa14.64□□□□□ -0.07
PTCH2-201ENST00000372192 ADAMTS8Q9UP79 889 aa14.63□□□□□ -0.07
PTCH2-201ENST00000372192 CENPJQ9HC77 1338 aaPredicted RBP14.62□□□□□ -0.07
PTCH2-201ENST00000372192 NBPF1Q3BBV0 1214 aa14.62□□□□□ -0.07
PTCH2-201ENST00000372192 MORC1Q86VD1 984 aa14.62□□□□□ -0.07
PTCH2-201ENST00000372192 PMFBP1Q8TBY8 1022 aa14.61□□□□□ -0.07
PTCH2-201ENST00000372192 TRIM44Q96DX7 344 aaPredicted RBP14.61□□□□□ -0.07
PTCH2-201ENST00000372192 MAPK8IP3Q9UPT6 1336 aa14.61□□□□□ -0.07
PTCH2-201ENST00000372192 E9PSI1 815 aa14.61□□□□□ -0.07
PTCH2-201ENST00000372192 C9orf84Q5VXU9 1444 aa14.61□□□□□ -0.07
PTCH2-201ENST00000372192 EIF3AQ14152 1382 aaKnown RBP14.61□□□□□ -0.07
PTCH2-201ENST00000372192 CGNL1Q0VF96 1302 aa14.61□□□□□ -0.07
PTCH2-201ENST00000372192 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
PTCH2-201ENST00000372192 APAF1O14727 1248 aa14.6□□□□□ -0.07
PTCH2-201ENST00000372192 RWDD1Q9H446 243 aaPredicted RBP14.59□□□□□ -0.07
PTCH2-201ENST00000372192 DHX29Q7Z478 1369 aaKnown RBP14.59□□□□□ -0.07
PTCH2-201ENST00000372192 CAMSAP2Q08AD1 1489 aa14.58□□□□□ -0.08
PTCH2-201ENST00000372192 RNF123Q5XPI4 1314 aa14.58□□□□□ -0.08
PTCH2-201ENST00000372192 KANK1Q14678 1352 aa14.58□□□□□ -0.08
PTCH2-201ENST00000372192 EFCAB2Q5VUJ9 269 aa14.57□□□□□ -0.08
PTCH2-201ENST00000372192 LAMC3Q9Y6N6 1575 aa14.57□□□□□ -0.08
PTCH2-201ENST00000372192 NGEFQ8N5V2 710 aa14.57□□□□□ -0.08
PTCH2-201ENST00000372192 SPRYD3Q8NCJ5 442 aa14.57□□□□□ -0.08
PTCH2-201ENST00000372192 KIAA0586Q9BVV6 1533 aa14.57□□□□□ -0.08
PTCH2-201ENST00000372192 NAP1L5Q96NT1 182 aaPredicted RBP14.56□□□□□ -0.08
PTCH2-201ENST00000372192 HSCBQ8IWL3 235 aa14.56□□□□□ -0.08
PTCH2-201ENST00000372192 GOLGA6L22H0YM25 854 aa14.56□□□□□ -0.08
PTCH2-201ENST00000372192 ANO8Q9HCE9 1232 aaPredicted RBP14.55□□□□□ -0.08
PTCH2-201ENST00000372192 PPP2R1AP30153 589 aa14.55□□□□□ -0.08
PTCH2-201ENST00000372192 COG6Q9Y2V7 657 aa14.55□□□□□ -0.08
PTCH2-201ENST00000372192 TEX14Q8IWB6 1497 aa14.55□□□□□ -0.08
PTCH2-201ENST00000372192 MYH16Q9H6N6 1097 aa14.55□□□□□ -0.08
PTCH2-201ENST00000372192 BRPF3Q9ULD4 1205 aa14.54□□□□□ -0.08
PTCH2-201ENST00000372192 CLUAP1Q96AJ1 413 aa14.53□□□□□ -0.08
PTCH2-201ENST00000372192 SPATA31E1Q6ZUB1 1445 aa14.53□□□□□ -0.08
PTCH2-201ENST00000372192 PTPRGP23470 1445 aa14.52□□□□□ -0.08
PTCH2-201ENST00000372192 RALGAPBQ86X10 1494 aa14.52□□□□□ -0.09
PTCH2-201ENST00000372192 U2SURPO15042 1029 aaKnown RBP14.52□□□□□ -0.09
PTCH2-201ENST00000372192 GOLGA6L3A6NEY3 463 aa14.52□□□□□ -0.09
PTCH2-201ENST00000372192 SAMD9Q5K651 1589 aa14.51□□□□□ -0.09
PTCH2-201ENST00000372192 FRAT2O75474 233 aaPredicted RBP14.51□□□□□ -0.09
PTCH2-201ENST00000372192 HSP90AB1P08238 724 aaKnown RBP14.51□□□□□ -0.09
PTCH2-201ENST00000372192 GZF1Q9H116 711 aaPredicted RBP14.51□□□□□ -0.09
PTCH2-201ENST00000372192 SKAP1Q86WV1 359 aa14.51□□□□□ -0.09
PTCH2-201ENST00000372192 RSPH6AQ9H0K4 717 aa14.51□□□□□ -0.09
PTCH2-201ENST00000372192 ERBINQ96RT1 1412 aa14.51□□□□□ -0.09
PTCH2-201ENST00000372192 GCC2Q8IWJ2 1684 aa14.5□□□□□ -0.09
PTCH2-201ENST00000372192 U2AF1L5P0DN76 240 aaPredicted RBP14.5□□□□□ -0.09
PTCH2-201ENST00000372192 U2AF1Q01081 240 aaKnown RBP eCLIP14.5□□□□□ -0.09
PTCH2-201ENST00000372192 STAC3Q96MF2 364 aa14.5□□□□□ -0.09
PTCH2-201ENST00000372192 C20orf194Q5TEA3 1177 aa14.49□□□□□ -0.09
PTCH2-201ENST00000372192 PLEKHH2Q8IVE3 1493 aa14.49□□□□□ -0.09
PTCH2-201ENST00000372192 SPAG9O60271 1321 aaKnown RBP14.49□□□□□ -0.09
PTCH2-201ENST00000372192 LRPPRCP42704 1394 aaKnown RBP14.48□□□□□ -0.09
PTCH2-201ENST00000372192 MFAP1P55081 439 aaKnown RBP14.48□□□□□ -0.09
PTCH2-201ENST00000372192 CHMP4BQ9H444 224 aaKnown RBP14.48□□□□□ -0.09
PTCH2-201ENST00000372192 RRP7AQ9Y3A4 280 aaKnown RBP14.48□□□□□ -0.09
PTCH2-201ENST00000372192 IFT140Q96RY7 1462 aa14.48□□□□□ -0.09
PTCH2-201ENST00000372192 PNNQ9H307 717 aaKnown RBP14.48□□□□□ -0.09
PTCH2-201ENST00000372192 MRC2Q9UBG0 1479 aa14.47□□□□□ -0.09
PTCH2-201ENST00000372192 MAGI3Q5TCQ9 1506 aa14.47□□□□□ -0.09
PTCH2-201ENST00000372192 BCL2L13Q9BXK5 485 aa14.47□□□□□ -0.09
PTCH2-201ENST00000372192 GPATCH8Q9UKJ3 1502 aaKnown RBP14.46□□□□□ -0.09
PTCH2-201ENST00000372192 NPM1P06748 294 aaKnown RBP eCLIP14.46□□□□□ -0.09
PTCH2-201ENST00000372192 PZPP20742 1482 aa14.46□□□□□ -0.09
PTCH2-201ENST00000372192 PDE3AQ14432 1141 aa14.46□□□□□ -0.09
PTCH2-201ENST00000372192 ITPRIPQ8IWB1 547 aa14.46□□□□□ -0.09
PTCH2-201ENST00000372192 PARD3Q8TEW0 1356 aa14.46□□□□□ -0.09
PTCH2-201ENST00000372192 KIF3BO15066 747 aa14.46□□□□□ -0.1
PTCH2-201ENST00000372192 IPO8O15397 1037 aaKnown RBP14.46□□□□□ -0.1
PTCH2-201ENST00000372192 AAMPQ13685 434 aa14.46□□□□□ -0.1
PTCH2-201ENST00000372192 SMC4Q9NTJ3 1288 aa14.46□□□□□ -0.1
PTCH2-201ENST00000372192 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.1
PTCH2-201ENST00000372192 PLB1Q6P1J6 1458 aa14.45□□□□□ -0.1
PTCH2-201ENST00000372192 PANK1Q8TE04 598 aa14.45□□□□□ -0.1
PTCH2-201ENST00000372192 WDR62O43379 1518 aa14.45□□□□□ -0.1
PTCH2-201ENST00000372192 BCAR3O75815 825 aa14.45□□□□□ -0.1
PTCH2-201ENST00000372192 SLFN5Q08AF3 891 aa14.44□□□□□ -0.1
PTCH2-201ENST00000372192 DNMT1P26358 1616 aaKnown RBP14.44□□□□□ -0.1
PTCH2-201ENST00000372192 NUP153P49790 1475 aaKnown RBP14.44□□□□□ -0.1
PTCH2-201ENST00000372192 GBP4Q96PP9 640 aa14.44□□□□□ -0.1
PTCH2-201ENST00000372192 NCLP19338 710 aaKnown RBP14.43□□□□□ -0.1
PTCH2-201ENST00000372192 KIF21AQ7Z4S6 1674 aa14.43□□□□□ -0.1
PTCH2-201ENST00000372192 SYNJ2O15056 1496 aa14.43□□□□□ -0.1
PTCH2-201ENST00000372192 DUSP27Q5VZP5 1158 aa14.43□□□□□ -0.1
PTCH2-201ENST00000372192 ZKSCAN2Q63HK3 967 aa14.42□□□□□ -0.1
PTCH2-201ENST00000372192 KDM6BO15054 1643 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms