RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 B4GALNT3Q6L9W6 998 aa15.96■□□□□ 0.15
PDE6C-201ENST00000371447 ERICH6Q7L0X2 663 aa15.95■□□□□ 0.14
PDE6C-201ENST00000371447 ADCY10Q96PN6 1610 aa15.95■□□□□ 0.14
PDE6C-201ENST00000371447 GGT6Q6P531 493 aa15.95■□□□□ 0.14
PDE6C-201ENST00000371447 ARHGEF12Q9NZN5 1544 aa15.95■□□□□ 0.14
PDE6C-201ENST00000371447 ADGBQ8N7X0 1667 aa15.94■□□□□ 0.14
PDE6C-201ENST00000371447 FAM135AQ9P2D6 1515 aa15.94■□□□□ 0.14
PDE6C-201ENST00000371447 NUTM2DQ5VT03 806 aaPredicted RBP15.93■□□□□ 0.14
PDE6C-201ENST00000371447 SCAPERQ9BY12 1400 aa15.92■□□□□ 0.14
PDE6C-201ENST00000371447 ABCC2Q92887 1545 aa15.92■□□□□ 0.14
PDE6C-201ENST00000371447 CDC42BPBQ9Y5S2 1711 aa15.91■□□□□ 0.14
PDE6C-201ENST00000371447 SHANK2Q9UPX8 1470 aa15.91■□□□□ 0.14
PDE6C-201ENST00000371447 PANK3Q9H999 370 aa15.91■□□□□ 0.14
PDE6C-201ENST00000371447 DHX29Q7Z478 1369 aaKnown RBP15.9■□□□□ 0.14
PDE6C-201ENST00000371447 CROCC2H7BZ55 1655 aa15.89■□□□□ 0.13
PDE6C-201ENST00000371447 PLCH2O75038 1416 aa15.89■□□□□ 0.13
PDE6C-201ENST00000371447 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
PDE6C-201ENST00000371447 PLA2R1Q13018 1463 aa15.87■□□□□ 0.13
PDE6C-201ENST00000371447 BCORL1Q5H9F3 1711 aa15.87■□□□□ 0.13
PDE6C-201ENST00000371447 ZBED9Q6R2W3 1325 aa15.86■□□□□ 0.13
PDE6C-201ENST00000371447 PNISRQ8TF01 805 aaKnown RBP15.85■□□□□ 0.13
PDE6C-201ENST00000371447 PREX2Q70Z35 1606 aa15.85■□□□□ 0.13
PDE6C-201ENST00000371447 RAPGEF3O95398 923 aa15.84■□□□□ 0.13
PDE6C-201ENST00000371447 TMF1P82094 1093 aa15.84■□□□□ 0.13
PDE6C-201ENST00000371447 DISP3Q9P2K9 1392 aa15.84■□□□□ 0.13
PDE6C-201ENST00000371447 RALGAPBQ86X10 1494 aa15.83■□□□□ 0.13
PDE6C-201ENST00000371447 CFAP70Q5T0N1 1121 aa15.83■□□□□ 0.12
PDE6C-201ENST00000371447 PRAG1Q86YV5 1406 aa15.82■□□□□ 0.12
PDE6C-201ENST00000371447 ARHGEF5Q12774 1597 aa15.82■□□□□ 0.12
PDE6C-201ENST00000371447 CYB5RLQ6IPT4 315 aa15.82■□□□□ 0.12
PDE6C-201ENST00000371447 RBM19Q9Y4C8 960 aaKnown RBP15.82■□□□□ 0.12
PDE6C-201ENST00000371447 A2MP01023 1474 aa15.81■□□□□ 0.12
PDE6C-201ENST00000371447 TESK2Q96S53 571 aa15.81■□□□□ 0.12
PDE6C-201ENST00000371447 ZCCHC11Q5TAX3 1644 aaKnown RBP15.8■□□□□ 0.12
PDE6C-201ENST00000371447 FANCAO15360 1455 aa15.8■□□□□ 0.12
PDE6C-201ENST00000371447 MYBBP1AQ9BQG0 1328 aaKnown RBP15.8■□□□□ 0.12
PDE6C-201ENST00000371447 UHRF1BP1Q6BDS2 1440 aa15.8■□□□□ 0.12
PDE6C-201ENST00000371447 TNNT2P45379 298 aaPredicted RBP15.8■□□□□ 0.12
PDE6C-201ENST00000371447 KTN1Q86UP2 1357 aaKnown RBP15.79■□□□□ 0.12
PDE6C-201ENST00000371447 SAFB2Q14151 953 aaKnown RBP eCLIP15.79■□□□□ 0.12
PDE6C-201ENST00000371447 KDM5CP41229 1560 aa15.79■□□□□ 0.12
PDE6C-201ENST00000371447 CDCA7LQ96GN5 454 aa15.78■□□□□ 0.12
PDE6C-201ENST00000371447 KNSTRNQ9Y448 316 aa15.78■□□□□ 0.12
PDE6C-201ENST00000371447 KANK1Q14678 1352 aa15.77■□□□□ 0.12
PDE6C-201ENST00000371447 ASXL2Q76L83 1435 aa15.77■□□□□ 0.12
PDE6C-201ENST00000371447 PPP4R2Q9NY27 417 aa15.77■□□□□ 0.12
PDE6C-201ENST00000371447 RALBP1Q15311 655 aa15.77■□□□□ 0.11
PDE6C-201ENST00000371447 MYO5CQ9NQX4 1742 aa15.77■□□□□ 0.11
PDE6C-201ENST00000371447 TMEM132EQ6IEE7 984 aa15.76■□□□□ 0.11
PDE6C-201ENST00000371447 TRAK1Q9UPV9 953 aa15.76■□□□□ 0.11
PDE6C-201ENST00000371447 SHROOM2Q13796 1616 aa15.76■□□□□ 0.11
PDE6C-201ENST00000371447 NLRP13Q86W25 1043 aa15.76■□□□□ 0.11
PDE6C-201ENST00000371447 NUDCQ9Y266 331 aa15.76■□□□□ 0.11
PDE6C-201ENST00000371447 ADGRL1O94910 1474 aa15.76■□□□□ 0.11
PDE6C-201ENST00000371447 ADGRF5Q8IZF2 1346 aa15.76■□□□□ 0.11
PDE6C-201ENST00000371447 ARID4BQ4LE39 1312 aaPredicted RBP15.75■□□□□ 0.11
PDE6C-201ENST00000371447 DUOX2Q9NRD8 1548 aa15.75■□□□□ 0.11
PDE6C-201ENST00000371447 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
PDE6C-201ENST00000371447 WDR7Q9Y4E6 1490 aa15.74■□□□□ 0.11
PDE6C-201ENST00000371447 WASHC2CQ9Y4E1 1318 aa15.74■□□□□ 0.11
PDE6C-201ENST00000371447 PER1O15534 1290 aaPredicted RBP15.74■□□□□ 0.11
PDE6C-201ENST00000371447 ERBINQ96RT1 1412 aa15.73■□□□□ 0.11
PDE6C-201ENST00000371447 PLIN1O60240 522 aa15.73■□□□□ 0.11
PDE6C-201ENST00000371447 CLASP1Q7Z460 1538 aa15.72■□□□□ 0.11
PDE6C-201ENST00000371447 KDM5DQ9BY66 1539 aa15.72■□□□□ 0.11
PDE6C-201ENST00000371447 CCDC146Q8IYE0 955 aa15.72■□□□□ 0.11
PDE6C-201ENST00000371447 SLC24A1O60721 1099 aa15.71■□□□□ 0.11
PDE6C-201ENST00000371447 STK26Q9P289 416 aa15.7■□□□□ 0.1
PDE6C-201ENST00000371447 ABCC1P33527 1531 aa15.7■□□□□ 0.1
PDE6C-201ENST00000371447 MLECQ14165 292 aa15.7■□□□□ 0.1
PDE6C-201ENST00000371447 UGGT1Q9NYU2 1555 aa15.69■□□□□ 0.1
PDE6C-201ENST00000371447 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
PDE6C-201ENST00000371447 WDR43Q15061 677 aaKnown RBP eCLIP15.69■□□□□ 0.1
PDE6C-201ENST00000371447 CFAP65Q6ZU64 1925 aaKnown RBP15.68■□□□□ 0.1
PDE6C-201ENST00000371447 CD109Q6YHK3 1445 aa15.67■□□□□ 0.1
PDE6C-201ENST00000371447 UHRF1BP1LA0JNW5 1464 aa15.66■□□□□ 0.1
PDE6C-201ENST00000371447 NEUROD2Q15784 382 aa15.66■□□□□ 0.1
PDE6C-201ENST00000371447 BRD4O60885 1362 aaPredicted RBP15.66■□□□□ 0.1
PDE6C-201ENST00000371447 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
PDE6C-201ENST00000371447 EXOC6Q8TAG9 804 aa15.65■□□□□ 0.1
PDE6C-201ENST00000371447 RCAN3Q9UKA8 241 aa15.65■□□□□ 0.1
PDE6C-201ENST00000371447 ATP10AO60312 1499 aa15.64■□□□□ 0.09
PDE6C-201ENST00000371447 MAST1Q9Y2H9 1570 aa15.64■□□□□ 0.09
PDE6C-201ENST00000371447 PPP2R1AP30153 589 aa15.63■□□□□ 0.09
PDE6C-201ENST00000371447 ATP7AQ04656 1500 aa15.62■□□□□ 0.09
PDE6C-201ENST00000371447 SLC12A5Q9H2X9 1139 aa15.62■□□□□ 0.09
PDE6C-201ENST00000371447 SKAP1Q86WV1 359 aa15.61■□□□□ 0.09
PDE6C-201ENST00000371447 UNC13BO14795 1591 aa15.61■□□□□ 0.09
PDE6C-201ENST00000371447 ZFYVE16Q7Z3T8 1539 aa15.61■□□□□ 0.09
PDE6C-201ENST00000371447 GPRASP1Q5JY77 1395 aa15.61■□□□□ 0.09
PDE6C-201ENST00000371447 SMG6Q86US8 1419 aaKnown RBP15.61■□□□□ 0.09
PDE6C-201ENST00000371447 CDCA8Q53HL2 280 aa15.61■□□□□ 0.09
PDE6C-201ENST00000371447 STAG3Q9UJ98 1225 aa15.61■□□□□ 0.09
PDE6C-201ENST00000371447 PARD3Q8TEW0 1356 aa15.61■□□□□ 0.09
PDE6C-201ENST00000371447 PLXNC1O60486 1568 aa15.6■□□□□ 0.09
PDE6C-201ENST00000371447 IQGAP3Q86VI3 1631 aa15.6■□□□□ 0.09
PDE6C-201ENST00000371447 FAM69CQ0P6D2 419 aa15.6■□□□□ 0.09
PDE6C-201ENST00000371447 TRPM1Q7Z4N2 1603 aa15.59■□□□□ 0.09
PDE6C-201ENST00000371447 COL17A1Q9UMD9 1497 aaPredicted RBP15.59■□□□□ 0.09
PDE6C-201ENST00000371447 RTEL1-TNFRSF6BF6WH68 1400 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms