RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 ZMYM4Q5VZL5 1548 aa15.43■□□□□ 0.06
SMARCA1-201ENST00000371121 ROCK2O75116 1388 aaKnown RBP15.43■□□□□ 0.06
SMARCA1-201ENST00000371121 NLRP1Q9C000 1473 aa15.43■□□□□ 0.06
SMARCA1-201ENST00000371121 ST20-MTHFSA0A0A6YYL1 179 aa15.41■□□□□ 0.06
SMARCA1-201ENST00000371121 DDRGK1Q96HY6 314 aa15.41■□□□□ 0.06
SMARCA1-201ENST00000371121 TRPM1Q7Z4N2 1603 aa15.41■□□□□ 0.06
SMARCA1-201ENST00000371121 KTN1Q86UP2 1357 aaKnown RBP15.4■□□□□ 0.06
SMARCA1-201ENST00000371121 ZNF326Q5BKZ1 582 aaKnown RBP15.4■□□□□ 0.06
SMARCA1-201ENST00000371121 POGKQ9P215 609 aa15.4■□□□□ 0.06
SMARCA1-201ENST00000371121 ARHGEF12Q9NZN5 1544 aa15.39■□□□□ 0.06
SMARCA1-201ENST00000371121 KDM5DQ9BY66 1539 aa15.39■□□□□ 0.05
SMARCA1-201ENST00000371121 PDE3BQ13370 1112 aa15.39■□□□□ 0.05
SMARCA1-201ENST00000371121 RALBP1Q15311 655 aa15.39■□□□□ 0.05
SMARCA1-201ENST00000371121 ARID3CA6NKF2 412 aa15.37■□□□□ 0.05
SMARCA1-201ENST00000371121 RSPH6AQ9H0K4 717 aa15.37■□□□□ 0.05
SMARCA1-201ENST00000371121 ADGRL2O95490 1459 aa15.37■□□□□ 0.05
SMARCA1-201ENST00000371121 TARBP1Q13395 1621 aaKnown RBP15.37■□□□□ 0.05
SMARCA1-201ENST00000371121 IQGAP2Q13576 1575 aa15.37■□□□□ 0.05
SMARCA1-201ENST00000371121 CAMSAP2Q08AD1 1489 aa15.36■□□□□ 0.05
SMARCA1-201ENST00000371121 PLEKHH1Q9ULM0 1364 aa15.36■□□□□ 0.05
SMARCA1-201ENST00000371121 NUP153P49790 1475 aaKnown RBP15.36■□□□□ 0.05
SMARCA1-201ENST00000371121 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
SMARCA1-201ENST00000371121 SEC24BO95487 1268 aa15.35■□□□□ 0.05
SMARCA1-201ENST00000371121 NLRP13Q86W25 1043 aa15.35■□□□□ 0.05
SMARCA1-201ENST00000371121 FAM161AQ3B820 660 aa15.34■□□□□ 0.05
SMARCA1-201ENST00000371121 CDC42BPAQ5VT25 1732 aa15.34■□□□□ 0.05
SMARCA1-201ENST00000371121 INSRP06213 1382 aa15.33■□□□□ 0.05
SMARCA1-201ENST00000371121 PKD2Q13563 968 aa15.33■□□□□ 0.04
SMARCA1-201ENST00000371121 ZNF521Q96K83 1311 aa15.33■□□□□ 0.04
SMARCA1-201ENST00000371121 CARD11Q9BXL7 1154 aa15.33■□□□□ 0.04
SMARCA1-201ENST00000371121 DUSP27Q5VZP5 1158 aa15.31■□□□□ 0.04
SMARCA1-201ENST00000371121 ANTXR1Q9H6X2 564 aa15.31■□□□□ 0.04
SMARCA1-201ENST00000371121 CENPQQ7L2Z9 268 aaPredicted RBP15.3■□□□□ 0.04
SMARCA1-201ENST00000371121 DISP3Q9P2K9 1392 aa15.3■□□□□ 0.04
SMARCA1-201ENST00000371121 COL17A1Q9UMD9 1497 aaPredicted RBP15.29■□□□□ 0.04
SMARCA1-201ENST00000371121 DISP1Q96F81 1524 aa15.29■□□□□ 0.04
SMARCA1-201ENST00000371121 MYO5CQ9NQX4 1742 aa15.28■□□□□ 0.04
SMARCA1-201ENST00000371121 PLEKHH2Q8IVE3 1493 aa15.28■□□□□ 0.04
SMARCA1-201ENST00000371121 PKNOX2Q96KN3 472 aa15.28■□□□□ 0.04
SMARCA1-201ENST00000371121 ADCY10Q96PN6 1610 aa15.27■□□□□ 0.04
SMARCA1-201ENST00000371121 PRDM15P57071 1507 aaPredicted RBP15.27■□□□□ 0.04
SMARCA1-201ENST00000371121 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.04
SMARCA1-201ENST00000371121 ADAMTS12P58397 1594 aa15.27■□□□□ 0.03
SMARCA1-201ENST00000371121 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
SMARCA1-201ENST00000371121 EIF4G3O43432 1585 aaKnown RBP15.26■□□□□ 0.03
SMARCA1-201ENST00000371121 KIAA0556O60303 1618 aa15.26■□□□□ 0.03
SMARCA1-201ENST00000371121 RAPGEF6Q8TEU7 1601 aa15.26■□□□□ 0.03
SMARCA1-201ENST00000371121 TESK2Q96S53 571 aa15.26■□□□□ 0.03
SMARCA1-201ENST00000371121 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
SMARCA1-201ENST00000371121 PRAG1Q86YV5 1406 aa15.26■□□□□ 0.03
SMARCA1-201ENST00000371121 IGHDP01880 384 aa15.26■□□□□ 0.03
SMARCA1-201ENST00000371121 ADAMTS8Q9UP79 889 aa15.25■□□□□ 0.03
SMARCA1-201ENST00000371121 LAMC1P11047 1609 aa15.25■□□□□ 0.03
SMARCA1-201ENST00000371121 PRG4Q92954 1404 aaPredicted RBP15.25■□□□□ 0.03
SMARCA1-201ENST00000371121 ABCC10Q5T3U5 1492 aa15.25■□□□□ 0.03
SMARCA1-201ENST00000371121 PTPRGP23470 1445 aa15.25■□□□□ 0.03
SMARCA1-201ENST00000371121 CLASP1Q7Z460 1538 aa15.24■□□□□ 0.03
SMARCA1-201ENST00000371121 NBPF1Q3BBV0 1214 aa15.24■□□□□ 0.03
SMARCA1-201ENST00000371121 CC2D1BQ5T0F9 858 aaKnown RBP15.23■□□□□ 0.03
SMARCA1-201ENST00000371121 MAGI2Q86UL8 1455 aa15.23■□□□□ 0.03
SMARCA1-201ENST00000371121 PANK2Q9BZ23 570 aa15.23■□□□□ 0.03
SMARCA1-201ENST00000371121 XRCC6P12956 609 aaKnown RBP eCLIP15.23■□□□□ 0.03
SMARCA1-201ENST00000371121 TRMT2AQ8IZ69 625 aaKnown RBP15.23■□□□□ 0.03
SMARCA1-201ENST00000371121 KDM2AQ9Y2K7 1162 aa15.23■□□□□ 0.03
SMARCA1-201ENST00000371121 ANKRD50Q9ULJ7 1429 aa15.22■□□□□ 0.03
SMARCA1-201ENST00000371121 FSD2A1L4K1 749 aa15.22■□□□□ 0.03
SMARCA1-201ENST00000371121 RGS3P49796 1198 aa15.22■□□□□ 0.03
SMARCA1-201ENST00000371121 GPRASP1Q5JY77 1395 aa15.21■□□□□ 0.03
SMARCA1-201ENST00000371121 ZMYND15Q9H091 742 aa15.2■□□□□ 0.02
SMARCA1-201ENST00000371121 PLA2R1Q13018 1463 aa15.2■□□□□ 0.02
SMARCA1-201ENST00000371121 WDR7Q9Y4E6 1490 aa15.2■□□□□ 0.02
SMARCA1-201ENST00000371121 MYOM1P52179 1685 aa15.19■□□□□ 0.02
SMARCA1-201ENST00000371121 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
SMARCA1-201ENST00000371121 EIF3AQ14152 1382 aaKnown RBP15.19■□□□□ 0.02
SMARCA1-201ENST00000371121 RNF17Q9BXT8 1623 aaKnown RBP15.18■□□□□ 0.02
SMARCA1-201ENST00000371121 RTEL1-TNFRSF6BF6WH68 1400 aa15.18■□□□□ 0.02
SMARCA1-201ENST00000371121 ERBB4Q15303 1308 aa15.18■□□□□ 0.02
SMARCA1-201ENST00000371121 A2MP01023 1474 aa15.18■□□□□ 0.02
SMARCA1-201ENST00000371121 PANK3Q9H999 370 aa15.17■□□□□ 0.02
SMARCA1-201ENST00000371121 BCAR3O75815 825 aa15.16■□□□□ 0.02
SMARCA1-201ENST00000371121 NUP155O75694 1391 aa15.16■□□□□ 0.02
SMARCA1-201ENST00000371121 SLKQ9H2G2 1235 aaPredicted RBP15.15■□□□□ 0.02
SMARCA1-201ENST00000371121 TROQ12816 1431 aaPredicted RBP15.15■□□□□ 0.02
SMARCA1-201ENST00000371121 SLFN5Q08AF3 891 aa15.15■□□□□ 0.02
SMARCA1-201ENST00000371121 CLCN1P35523 988 aa15.14■□□□□ 0.01
SMARCA1-201ENST00000371121 FAM135AQ9P2D6 1515 aa15.14■□□□□ 0.01
SMARCA1-201ENST00000371121 SHANK2Q9UPX8 1470 aa15.13■□□□□ 0.01
SMARCA1-201ENST00000371121 ABCC2Q92887 1545 aa15.13■□□□□ 0.01
SMARCA1-201ENST00000371121 ERBINQ96RT1 1412 aa15.13■□□□□ 0.01
SMARCA1-201ENST00000371121 DAXXQ9UER7 740 aaPredicted RBP15.12■□□□□ 0.01
SMARCA1-201ENST00000371121 TBC1D2Q9BYX2 928 aa15.12■□□□□ 0.01
SMARCA1-201ENST00000371121 ANKRD30AQ9BXX3 1397 aa15.12■□□□□ 0.01
SMARCA1-201ENST00000371121 PDS5BQ9NTI5 1447 aa15.12■□□□□ 0.01
SMARCA1-201ENST00000371121 PLXNC1O60486 1568 aa15.11■□□□□ 0.01
SMARCA1-201ENST00000371121 IQGAP1P46940 1657 aa15.11■□□□□ 0.01
SMARCA1-201ENST00000371121 C9orf84Q5VXU9 1444 aa15.11■□□□□ 0.01
SMARCA1-201ENST00000371121 PLB1Q6P1J6 1458 aa15.11■□□□□ 0.01
SMARCA1-201ENST00000371121 PPP2R1AP30153 589 aa15.1■□□□□ 0.01
SMARCA1-201ENST00000371121 CFDP1Q9UEE9 299 aaPredicted RBP15.1■□□□□ 0.01
SMARCA1-201ENST00000371121 NKTRP30414 1462 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms