RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 NUDT7P0C024 238 aa14□□□□□ -0.17
COL21A1-202ENST00000370817 PCDHGA4Q9Y5G9 962 aa14□□□□□ -0.17
COL21A1-202ENST00000370817 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
COL21A1-202ENST00000370817 CUL7Q14999 1698 aa13.97□□□□□ -0.17
COL21A1-202ENST00000370817 FOXK1P85037 733 aa13.96□□□□□ -0.17
COL21A1-202ENST00000370817 GPHNQ9NQX3 736 aaPredicted RBP13.96□□□□□ -0.17
COL21A1-202ENST00000370817 RYDENQ9NUL5 291 aaKnown RBP13.96□□□□□ -0.17
COL21A1-202ENST00000370817 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
COL21A1-202ENST00000370817 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
COL21A1-202ENST00000370817 AMER1Q5JTC6 1135 aaPredicted RBP13.94□□□□□ -0.18
COL21A1-202ENST00000370817 KIF27Q86VH2 1401 aa13.94□□□□□ -0.18
COL21A1-202ENST00000370817 PLPP6Q8IY26 295 aa13.94□□□□□ -0.18
COL21A1-202ENST00000370817 DSG2Q14126 1118 aa13.93□□□□□ -0.18
COL21A1-202ENST00000370817 FHAD1B1AJZ9 1412 aa13.92□□□□□ -0.18
COL21A1-202ENST00000370817 LHX6Q9UPM6 363 aa13.92□□□□□ -0.18
COL21A1-202ENST00000370817 GRIN2AQ12879 1464 aa13.92□□□□□ -0.18
COL21A1-202ENST00000370817 CEP170Q5SW79 1584 aa13.9□□□□□ -0.18
COL21A1-202ENST00000370817 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.19
COL21A1-202ENST00000370817 IGF1RP08069 1367 aa13.89□□□□□ -0.19
COL21A1-202ENST00000370817 GTPBP6O43824 516 aaPredicted RBP13.89□□□□□ -0.19
COL21A1-202ENST00000370817 PTCD2Q8WV60 388 aaKnown RBP13.89□□□□□ -0.19
COL21A1-202ENST00000370817 NUP160Q12769 1436 aa13.88□□□□□ -0.19
COL21A1-202ENST00000370817 KDM4FA0A1W2PPD8 638 aa13.86□□□□□ -0.19
COL21A1-202ENST00000370817 CRISPLD2Q9H0B8 497 aa13.86□□□□□ -0.19
COL21A1-202ENST00000370817 SHROOM2Q13796 1616 aa13.85□□□□□ -0.19
COL21A1-202ENST00000370817 RIMBP3CA6NJZ7 1639 aa13.84□□□□□ -0.19
COL21A1-202ENST00000370817 RIMBP3BA6NNM3 1639 aa13.84□□□□□ -0.19
COL21A1-202ENST00000370817 RIMBP3Q9UFD9 1639 aa13.84□□□□□ -0.19
COL21A1-202ENST00000370817 CHMP7Q8WUX9 453 aaPredicted RBP13.83□□□□□ -0.2
COL21A1-202ENST00000370817 POTEEQ6S8J3 1075 aa13.81□□□□□ -0.2
COL21A1-202ENST00000370817 NCKAP5LQ9HCH0 1330 aa13.81□□□□□ -0.2
COL21A1-202ENST00000370817 ARHGEF11O15085 1522 aa13.8□□□□□ -0.2
COL21A1-202ENST00000370817 LSM11P83369 360 aaKnown RBP eCLIP13.8□□□□□ -0.2
COL21A1-202ENST00000370817 ANKRD13DQ6ZTN6 518 aa13.8□□□□□ -0.2
COL21A1-202ENST00000370817 PBX2P40425 430 aa13.78□□□□□ -0.2
COL21A1-202ENST00000370817 PPP1R15BQ5SWA1 713 aa13.78□□□□□ -0.2
COL21A1-202ENST00000370817 AXIN2Q9Y2T1 843 aa13.78□□□□□ -0.2
COL21A1-202ENST00000370817 CARMIL1Q5VZK9 1371 aa13.78□□□□□ -0.2
COL21A1-202ENST00000370817 PRXQ9BXM0 1461 aa13.78□□□□□ -0.2
COL21A1-202ENST00000370817 CTTNBP2Q8WZ74 1663 aa13.77□□□□□ -0.21
COL21A1-202ENST00000370817 RNF166Q96A37 237 aaPredicted RBP13.77□□□□□ -0.21
COL21A1-202ENST00000370817 EEA1Q15075 1411 aa13.76□□□□□ -0.21
COL21A1-202ENST00000370817 OXER1Q8TDS5 423 aa13.76□□□□□ -0.21
COL21A1-202ENST00000370817 MYT1LQ9UL68 1186 aa13.76□□□□□ -0.21
COL21A1-202ENST00000370817 RAPGEF2Q9Y4G8 1499 aa13.75□□□□□ -0.21
COL21A1-202ENST00000370817 TBC1D12O60347 775 aa13.75□□□□□ -0.21
COL21A1-202ENST00000370817 PSDA5PKW4 1024 aaPredicted RBP13.74□□□□□ -0.21
COL21A1-202ENST00000370817 PDE4AP27815 886 aa13.74□□□□□ -0.21
COL21A1-202ENST00000370817 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL21A1-202ENST00000370817 ERCC6L2Q5T890 1561 aa13.73□□□□□ -0.21
COL21A1-202ENST00000370817 PTGER2P43116 358 aa13.72□□□□□ -0.21
COL21A1-202ENST00000370817 KIAA0586Q9BVV6 1533 aa13.72□□□□□ -0.21
COL21A1-202ENST00000370817 ARAP1Q96P48 1450 aa13.71□□□□□ -0.21
COL21A1-202ENST00000370817 KIF21BO75037 1637 aa13.71□□□□□ -0.22
COL21A1-202ENST00000370817 IQGAP2Q13576 1575 aa13.7□□□□□ -0.22
COL21A1-202ENST00000370817 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
COL21A1-202ENST00000370817 ARHGAP33O14559 1287 aa13.68□□□□□ -0.22
COL21A1-202ENST00000370817 DDX27Q96GQ7 796 aaKnown RBP13.67□□□□□ -0.22
COL21A1-202ENST00000370817 PPP4R3BQ5MIZ7 849 aa13.66□□□□□ -0.22
COL21A1-202ENST00000370817 CADPS2Q86UW7 1296 aa13.66□□□□□ -0.22
COL21A1-202ENST00000370817 MFSD10Q14728 455 aa13.65□□□□□ -0.22
COL21A1-202ENST00000370817 UGGT2Q9NYU1 1516 aa13.64□□□□□ -0.23
COL21A1-202ENST00000370817 PSEN2P49810 448 aa13.63□□□□□ -0.23
COL21A1-202ENST00000370817 PRG4Q92954 1404 aaPredicted RBP13.62□□□□□ -0.23
COL21A1-202ENST00000370817 DMRTA1Q5VZB9 504 aa13.61□□□□□ -0.23
COL21A1-202ENST00000370817 ADGRD1Q6QNK2 874 aa13.61□□□□□ -0.23
COL21A1-202ENST00000370817 JPH4Q96JJ6 628 aa13.6□□□□□ -0.23
COL21A1-202ENST00000370817 KIAA0556O60303 1618 aa13.6□□□□□ -0.23
COL21A1-202ENST00000370817 DISP1Q96F81 1524 aa13.59□□□□□ -0.23
COL21A1-202ENST00000370817 BBXQ8WY36 941 aaPredicted RBP13.59□□□□□ -0.23
COL21A1-202ENST00000370817 ZNF454Q8N9F8 522 aa13.58□□□□□ -0.24
COL21A1-202ENST00000370817 EMILIN3Q9NT22 766 aa13.57□□□□□ -0.24
COL21A1-202ENST00000370817 SAMD9Q5K651 1589 aa13.57□□□□□ -0.24
COL21A1-202ENST00000370817 EVI5O60447 810 aa13.56□□□□□ -0.24
COL21A1-202ENST00000370817 KCNK17Q96T54 332 aa13.56□□□□□ -0.24
COL21A1-202ENST00000370817 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
COL21A1-202ENST00000370817 TK2O00142 265 aa13.55□□□□□ -0.24
COL21A1-202ENST00000370817 FOSBP53539 338 aa13.55□□□□□ -0.24
COL21A1-202ENST00000370817 GOLGA3Q08378 1498 aa13.54□□□□□ -0.24
COL21A1-202ENST00000370817 FAM9AQ8IZU1 332 aaPredicted RBP13.53□□□□□ -0.24
COL21A1-202ENST00000370817 HRO43593 1189 aa13.52□□□□□ -0.25
COL21A1-202ENST00000370817 MAP3K9P80192 1104 aa13.52□□□□□ -0.25
COL21A1-202ENST00000370817 ADCY10Q96PN6 1610 aa13.52□□□□□ -0.25
COL21A1-202ENST00000370817 CYB5RLQ6IPT4 315 aa13.51□□□□□ -0.25
COL21A1-202ENST00000370817 BCL2L12Q9HB09 334 aa13.51□□□□□ -0.25
COL21A1-202ENST00000370817 CARMIL2Q6F5E8 1435 aa13.5□□□□□ -0.25
COL21A1-202ENST00000370817 KCNH8Q96L42 1107 aa13.49□□□□□ -0.25
COL21A1-202ENST00000370817 TNIKQ9UKE5 1360 aa13.48□□□□□ -0.25
COL21A1-202ENST00000370817 EFCAB5A4FU69 1503 aa13.46□□□□□ -0.25
COL21A1-202ENST00000370817 CAMK2BQ13554 666 aa13.45□□□□□ -0.26
COL21A1-202ENST00000370817 ZDHHC16Q969W1 377 aa13.45□□□□□ -0.26
COL21A1-202ENST00000370817 VPS9D1Q9Y2B5 631 aa13.45□□□□□ -0.26
COL21A1-202ENST00000370817 UHRF1BP1LA0JNW5 1464 aa13.44□□□□□ -0.26
COL21A1-202ENST00000370817 SPRYD3Q8NCJ5 442 aa13.44□□□□□ -0.26
COL21A1-202ENST00000370817 ADAM33Q9BZ11 813 aa13.44□□□□□ -0.26
COL21A1-202ENST00000370817 ABCA8O94911 1581 aa13.44□□□□□ -0.26
COL21A1-202ENST00000370817 PTPREP23469 700 aa13.43□□□□□ -0.26
COL21A1-202ENST00000370817 PTPRGP23470 1445 aa13.43□□□□□ -0.26
COL21A1-202ENST00000370817 ABCC2Q92887 1545 aa13.43□□□□□ -0.26
COL21A1-202ENST00000370817 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms