RNA–Protein interactions for RNA: ENST00000370792.7

USP33-202, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 1 (best) BASIC

Gene USP33, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-202ENST00000370792 CCDC136Q96JN2 1154 aa19.31■□□□□ 0.68
USP33-202ENST00000370792 ARHGEF12Q9NZN5 1544 aa19.29■□□□□ 0.68
USP33-202ENST00000370792 NBPF1Q3BBV0 1214 aa19.29■□□□□ 0.68
USP33-202ENST00000370792 MYBBP1AQ9BQG0 1328 aaKnown RBP19.27■□□□□ 0.68
USP33-202ENST00000370792 KDM5DQ9BY66 1539 aa19.27■□□□□ 0.68
USP33-202ENST00000370792 PTPRGP23470 1445 aa19.27■□□□□ 0.67
USP33-202ENST00000370792 RNF123Q5XPI4 1314 aa19.26■□□□□ 0.67
USP33-202ENST00000370792 FAM135AQ9P2D6 1515 aa19.25■□□□□ 0.67
USP33-202ENST00000370792 SAMD9LQ8IVG5 1584 aa19.25■□□□□ 0.67
USP33-202ENST00000370792 CCDC141Q6ZP82 1450 aa19.24■□□□□ 0.67
USP33-202ENST00000370792 CCDC144AA2RUR9 1427 aa19.23■□□□□ 0.67
USP33-202ENST00000370792 BRD4O60885 1362 aaPredicted RBP19.22■□□□□ 0.67
USP33-202ENST00000370792 LRPPRCP42704 1394 aaKnown RBP19.22■□□□□ 0.67
USP33-202ENST00000370792 RALBP1Q15311 655 aa19.22■□□□□ 0.67
USP33-202ENST00000370792 ARHGEF5Q12774 1597 aa19.21■□□□□ 0.67
USP33-202ENST00000370792 CC2D1BQ5T0F9 858 aaKnown RBP19.21■□□□□ 0.67
USP33-202ENST00000370792 PRAG1Q86YV5 1406 aa19.2■□□□□ 0.66
USP33-202ENST00000370792 SYCP2Q9BX26 1530 aa19.2■□□□□ 0.66
USP33-202ENST00000370792 CDC42BPBQ9Y5S2 1711 aa19.19■□□□□ 0.66
USP33-202ENST00000370792 KTN1Q86UP2 1357 aaKnown RBP19.18■□□□□ 0.66
USP33-202ENST00000370792 PAK3O75914 559 aaPredicted RBP19.17■□□□□ 0.66
USP33-202ENST00000370792 PLA2R1Q13018 1463 aa19.17■□□□□ 0.66
USP33-202ENST00000370792 EXOC6Q8TAG9 804 aa19.17■□□□□ 0.66
USP33-202ENST00000370792 ARHGAP5Q13017 1502 aa19.16■□□□□ 0.66
USP33-202ENST00000370792 NLRP13Q86W25 1043 aa19.16■□□□□ 0.66
USP33-202ENST00000370792 RRP1P56182 461 aaKnown RBP19.16■□□□□ 0.66
USP33-202ENST00000370792 E9PCH4 1651 aa19.16■□□□□ 0.66
USP33-202ENST00000370792 DISP3Q9P2K9 1392 aa19.15■□□□□ 0.66
USP33-202ENST00000370792 CDCA7LQ96GN5 454 aa19.15■□□□□ 0.66
USP33-202ENST00000370792 PREX2Q70Z35 1606 aa19.15■□□□□ 0.66
USP33-202ENST00000370792 A2MP01023 1474 aa19.15■□□□□ 0.66
USP33-202ENST00000370792 TRPM1Q7Z4N2 1603 aa19.15■□□□□ 0.66
USP33-202ENST00000370792 NOP58Q9Y2X3 529 aaKnown RBP19.14■□□□□ 0.65
USP33-202ENST00000370792 PLEKHH2Q8IVE3 1493 aa19.14■□□□□ 0.65
USP33-202ENST00000370792 TTC37Q6PGP7 1564 aa19.14■□□□□ 0.65
USP33-202ENST00000370792 PER1O15534 1290 aaPredicted RBP19.14■□□□□ 0.65
USP33-202ENST00000370792 RCAN3Q9UKA8 241 aa19.14■□□□□ 0.65
USP33-202ENST00000370792 PARD3Q8TEW0 1356 aa19.13■□□□□ 0.65
USP33-202ENST00000370792 NBR1Q14596 966 aa19.12■□□□□ 0.65
USP33-202ENST00000370792 PANK3Q9H999 370 aa19.12■□□□□ 0.65
USP33-202ENST00000370792 RSPH4AQ5TD94 716 aa19.11■□□□□ 0.65
USP33-202ENST00000370792 TESK2Q96S53 571 aa19.11■□□□□ 0.65
USP33-202ENST00000370792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.09■□□□□ 0.652e-7■■■■■ 47.7
USP33-202ENST00000370792 PLIN1O60240 522 aa19.08■□□□□ 0.65
USP33-202ENST00000370792 COL17A1Q9UMD9 1497 aaPredicted RBP19.07■□□□□ 0.64
USP33-202ENST00000370792 GPRASP1Q5JY77 1395 aa19.06■□□□□ 0.64
USP33-202ENST00000370792 ANP32AP39687 249 aaKnown RBP19.06■□□□□ 0.64
USP33-202ENST00000370792 ERBINQ96RT1 1412 aa19.06■□□□□ 0.64
USP33-202ENST00000370792 UNC13BO14795 1591 aa19.05■□□□□ 0.64
USP33-202ENST00000370792 NPM2Q86SE8 214 aaKnown RBP19.05■□□□□ 0.64
USP33-202ENST00000370792 ERCC6L2Q5T890 1561 aa19.05■□□□□ 0.64
USP33-202ENST00000370792 TMF1P82094 1093 aa19.04■□□□□ 0.64
USP33-202ENST00000370792 PRDM15P57071 1507 aaPredicted RBP19.03■□□□□ 0.64
USP33-202ENST00000370792 SKAP1Q86WV1 359 aa19.02■□□□□ 0.64
USP33-202ENST00000370792 IPO9Q96P70 1041 aaKnown RBP19.02■□□□□ 0.64
USP33-202ENST00000370792 MYO5CQ9NQX4 1742 aa19.02■□□□□ 0.63
USP33-202ENST00000370792 CHD1O14646 1710 aa19.01■□□□□ 0.63
USP33-202ENST00000370792 MAST1Q9Y2H9 1570 aa19■□□□□ 0.63
USP33-202ENST00000370792 PDE3BQ13370 1112 aa19■□□□□ 0.63
USP33-202ENST00000370792 IQGAP3Q86VI3 1631 aa19■□□□□ 0.63
USP33-202ENST00000370792 DEKP35659 375 aaKnown RBP18.98■□□□□ 0.63
USP33-202ENST00000370792 ZBTB47Q9UFB7 747 aaPredicted RBP18.97■□□□□ 0.63
USP33-202ENST00000370792 ADAMTS8Q9UP79 889 aa18.97■□□□□ 0.63
USP33-202ENST00000370792 CRBNQ96SW2 442 aa18.97■□□□□ 0.63
USP33-202ENST00000370792 DUOX2Q9NRD8 1548 aa18.97■□□□□ 0.63
USP33-202ENST00000370792 PLXNC1O60486 1568 aa18.96■□□□□ 0.63
USP33-202ENST00000370792 TRAPPC8Q9Y2L5 1435 aa18.96■□□□□ 0.63
USP33-202ENST00000370792 BLMP54132 1417 aaPredicted RBP18.95■□□□□ 0.62
USP33-202ENST00000370792 ABCC2Q92887 1545 aa18.95■□□□□ 0.62
USP33-202ENST00000370792 WASHC2CQ9Y4E1 1318 aa18.94■□□□□ 0.62
USP33-202ENST00000370792 C20orf194Q5TEA3 1177 aa18.94■□□□□ 0.62
USP33-202ENST00000370792 AFAP1Q8N556 730 aa18.94■□□□□ 0.62
USP33-202ENST00000370792 EIF2AK4Q9P2K8 1649 aaKnown RBP18.94■□□□□ 0.62
USP33-202ENST00000370792 EFCAB2Q5VUJ9 269 aa18.94■□□□□ 0.62
USP33-202ENST00000370792 MAGI2Q86UL8 1455 aa18.93■□□□□ 0.62
USP33-202ENST00000370792 PDE4AP27815 886 aa18.93■□□□□ 0.62
USP33-202ENST00000370792 KNSTRNQ9Y448 316 aa18.93■□□□□ 0.62
USP33-202ENST00000370792 LAMC1P11047 1609 aa18.93■□□□□ 0.62
USP33-202ENST00000370792 TCERG1O14776 1098 aaKnown RBP18.92■□□□□ 0.62
USP33-202ENST00000370792 PPP2R1AP30153 589 aa18.91■□□□□ 0.62
USP33-202ENST00000370792 PLCH2O75038 1416 aa18.91■□□□□ 0.62
USP33-202ENST00000370792 ATP10AO60312 1499 aa18.9■□□□□ 0.62
USP33-202ENST00000370792 WDR7Q9Y4E6 1490 aa18.9■□□□□ 0.62
USP33-202ENST00000370792 SPAG9O60271 1321 aaKnown RBP18.89■□□□□ 0.61
USP33-202ENST00000370792 WDR43Q15061 677 aaKnown RBP eCLIP18.89■□□□□ 0.61
USP33-202ENST00000370792 SHROOM2Q13796 1616 aa18.89■□□□□ 0.61
USP33-202ENST00000370792 PLEKHH1Q9ULM0 1364 aa18.88■□□□□ 0.61
USP33-202ENST00000370792 MYT1LQ9UL68 1186 aa18.87■□□□□ 0.61
USP33-202ENST00000370792 RNF17Q9BXT8 1623 aaKnown RBP18.87■□□□□ 0.61
USP33-202ENST00000370792 ZMYM4Q5VZL5 1548 aa18.87■□□□□ 0.61
USP33-202ENST00000370792 AMER1Q5JTC6 1135 aaPredicted RBP18.87■□□□□ 0.61
USP33-202ENST00000370792 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
USP33-202ENST00000370792 BACH2Q9BYV9 841 aa18.87■□□□□ 0.61
USP33-202ENST00000370792 ABCC1P33527 1531 aa18.85■□□□□ 0.61
USP33-202ENST00000370792 MADDQ8WXG6 1647 aa18.85■□□□□ 0.61
USP33-202ENST00000370792 LAS1LQ9Y4W2 734 aaKnown RBP18.85■□□□□ 0.61
USP33-202ENST00000370792 ZCCHC11Q5TAX3 1644 aaKnown RBP18.84■□□□□ 0.61
USP33-202ENST00000370792 RTL5Q5HYW3 569 aaPredicted RBP18.82■□□□□ 0.6
USP33-202ENST00000370792 DUSP27Q5VZP5 1158 aa18.82■□□□□ 0.6
USP33-202ENST00000370792 SCAF11Q99590 1463 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms