RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 GOLGA3Q08378 1498 aa13.74□□□□□ -0.21
COL11A1-203ENST00000370096 CCDC70Q6NSX1 233 aa13.74□□□□□ -0.21
COL11A1-203ENST00000370096 GSE1Q14687 1217 aa13.74□□□□□ -0.21
COL11A1-203ENST00000370096 MCTP1Q6DN14 999 aa13.74□□□□□ -0.21
COL11A1-203ENST00000370096 STK31Q9BXU1 1019 aa13.74□□□□□ -0.21
COL11A1-203ENST00000370096 HDGFL2Q7Z4V5 671 aaPredicted RBP13.73□□□□□ -0.21
COL11A1-203ENST00000370096 FAM184AQ8NB25 1140 aa13.73□□□□□ -0.21
COL11A1-203ENST00000370096 FRAT2O75474 233 aaPredicted RBP13.73□□□□□ -0.21
COL11A1-203ENST00000370096 TPM2P07951 284 aa13.72□□□□□ -0.21
COL11A1-203ENST00000370096 TEX35Q5T0J7 233 aa13.72□□□□□ -0.21
COL11A1-203ENST00000370096 HOMER1Q86YM7 354 aa13.71□□□□□ -0.22
COL11A1-203ENST00000370096 TPM1P09493 284 aa13.71□□□□□ -0.22
COL11A1-203ENST00000370096 HMMRO75330 724 aa13.7□□□□□ -0.22
COL11A1-203ENST00000370096 RAD21O60216 631 aa13.7□□□□□ -0.22
COL11A1-203ENST00000370096 SPAG9O60271 1321 aaKnown RBP13.69□□□□□ -0.22
COL11A1-203ENST00000370096 FOSBP53539 338 aa13.68□□□□□ -0.22
COL11A1-203ENST00000370096 PLIN1O60240 522 aa13.68□□□□□ -0.22
COL11A1-203ENST00000370096 ANKRD45Q5TZF3 282 aa13.68□□□□□ -0.22
COL11A1-203ENST00000370096 ROCK2O75116 1388 aaKnown RBP13.67□□□□□ -0.22
COL11A1-203ENST00000370096 RRP7AQ9Y3A4 280 aaKnown RBP13.67□□□□□ -0.22
COL11A1-203ENST00000370096 CENPJQ9HC77 1338 aaPredicted RBP13.67□□□□□ -0.22
COL11A1-203ENST00000370096 SKIDA1Q1XH10 827 aa13.66□□□□□ -0.22
COL11A1-203ENST00000370096 KANK1Q14678 1352 aa13.66□□□□□ -0.22
COL11A1-203ENST00000370096 LTV1Q96GA3 475 aaPredicted RBP13.66□□□□□ -0.22
COL11A1-203ENST00000370096 AKAP17AQ02040 695 aaKnown RBP13.66□□□□□ -0.22
COL11A1-203ENST00000370096 BCL2L13Q9BXK5 485 aa13.66□□□□□ -0.22
COL11A1-203ENST00000370096 MAP7D2Q96T17 732 aa13.65□□□□□ -0.22
COL11A1-203ENST00000370096 NAP1L1P55209 391 aaKnown RBP13.65□□□□□ -0.22
COL11A1-203ENST00000370096 KIF3AQ9Y496 699 aa13.65□□□□□ -0.22
COL11A1-203ENST00000370096 RUFY1Q96T51 708 aa13.64□□□□□ -0.23
COL11A1-203ENST00000370096 BAZ1BQ9UIG0 1483 aaKnown RBP13.64□□□□□ -0.23
COL11A1-203ENST00000370096 PDE4AP27815 886 aa13.64□□□□□ -0.23
COL11A1-203ENST00000370096 SKOR2Q2VWA4 1001 aaPredicted RBP13.64□□□□□ -0.23
COL11A1-203ENST00000370096 PLCD4Q9BRC7 762 aa13.64□□□□□ -0.23
COL11A1-203ENST00000370096 ELL2O00472 640 aaPredicted RBP13.63□□□□□ -0.23
COL11A1-203ENST00000370096 APPP05067 770 aa13.62□□□□□ -0.23
COL11A1-203ENST00000370096 RALBP1Q15311 655 aa13.62□□□□□ -0.23
COL11A1-203ENST00000370096 CCNB3Q8WWL7 1395 aa13.62□□□□□ -0.23
COL11A1-203ENST00000370096 TCEAL9Q9UHQ7 104 aa13.62□□□□□ -0.23
COL11A1-203ENST00000370096 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
COL11A1-203ENST00000370096 DHX37Q8IY37 1157 aaKnown RBP13.62□□□□□ -0.23
COL11A1-203ENST00000370096 KRI1Q8N9T8 703 aaKnown RBP13.62□□□□□ -0.23
COL11A1-203ENST00000370096 GGT6Q6P531 493 aa13.62□□□□□ -0.23
COL11A1-203ENST00000370096 NOM1Q5C9Z4 860 aaKnown RBP13.62□□□□□ -0.23
COL11A1-203ENST00000370096 AK7Q96M32 723 aa13.62□□□□□ -0.23
COL11A1-203ENST00000370096 IFT57Q9NWB7 429 aa13.61□□□□□ -0.23
COL11A1-203ENST00000370096 FAM161AQ3B820 660 aa13.61□□□□□ -0.23
COL11A1-203ENST00000370096 IPO7O95373 1038 aaKnown RBP13.61□□□□□ -0.23
COL11A1-203ENST00000370096 BICD2Q8TD16 824 aa13.61□□□□□ -0.23
COL11A1-203ENST00000370096 GTF2E1P29083 439 aaPredicted RBP13.6□□□□□ -0.23
COL11A1-203ENST00000370096 HDGFP51858 240 aaKnown RBP13.6□□□□□ -0.23
COL11A1-203ENST00000370096 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL11A1-203ENST00000370096 R3HCC1Q9Y3T6 440 aaKnown RBP13.6□□□□□ -0.23
COL11A1-203ENST00000370096 PKD2Q13563 968 aa13.6□□□□□ -0.23
COL11A1-203ENST00000370096 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
COL11A1-203ENST00000370096 TTLL5Q6EMB2 1281 aa13.6□□□□□ -0.23
COL11A1-203ENST00000370096 NGEFQ8N5V2 710 aa13.6□□□□□ -0.23
COL11A1-203ENST00000370096 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
COL11A1-203ENST00000370096 ATP6V1DQ9Y5K8 247 aa13.59□□□□□ -0.23
COL11A1-203ENST00000370096 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL11A1-203ENST00000370096 SYNE3Q6ZMZ3 975 aa13.59□□□□□ -0.23
COL11A1-203ENST00000370096 FAM43AQ8N2R8 423 aa13.59□□□□□ -0.23
COL11A1-203ENST00000370096 CRBNQ96SW2 442 aa13.59□□□□□ -0.23
COL11A1-203ENST00000370096 NUTM2FA1L443 756 aa13.58□□□□□ -0.23
COL11A1-203ENST00000370096 TRIM29Q14134 588 aa13.58□□□□□ -0.23
COL11A1-203ENST00000370096 MNS1Q8NEH6 495 aa13.58□□□□□ -0.24
COL11A1-203ENST00000370096 EIF4G1Q04637 1599 aaKnown RBP13.58□□□□□ -0.24
COL11A1-203ENST00000370096 KDM4AO75164 1064 aa13.58□□□□□ -0.24
COL11A1-203ENST00000370096 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.58□□□□□ -0.24
COL11A1-203ENST00000370096 EXOC6Q8TAG9 804 aa13.58□□□□□ -0.24
COL11A1-203ENST00000370096 H0YHG0 523 aa13.57□□□□□ -0.24
COL11A1-203ENST00000370096 SASS6Q6UVJ0 657 aa13.56□□□□□ -0.24
COL11A1-203ENST00000370096 PDILTQ8N807 584 aa13.56□□□□□ -0.24
COL11A1-203ENST00000370096 ANKRD20A12PQ8NF67 263 aa13.56□□□□□ -0.24
COL11A1-203ENST00000370096 CENPQQ7L2Z9 268 aaPredicted RBP13.56□□□□□ -0.24
COL11A1-203ENST00000370096 DIAPH3Q9NSV4 1193 aa13.56□□□□□ -0.24
COL11A1-203ENST00000370096 DHX16O60231 1041 aaKnown RBP13.56□□□□□ -0.24
COL11A1-203ENST00000370096 NECTIN2Q92692 538 aa13.56□□□□□ -0.24
COL11A1-203ENST00000370096 SAMD1Q6SPF0 538 aaPredicted RBP13.55□□□□□ -0.24
COL11A1-203ENST00000370096 AMPHP49418 695 aa13.55□□□□□ -0.24
COL11A1-203ENST00000370096 VPS37CA5D8V6 355 aaPredicted RBP13.55□□□□□ -0.24
COL11A1-203ENST00000370096 SETD5Q9C0A6 1442 aa13.55□□□□□ -0.24
COL11A1-203ENST00000370096 RBM10P98175 930 aaKnown RBP13.54□□□□□ -0.24
COL11A1-203ENST00000370096 CT47A1Q5JQC4 288 aaPredicted RBP13.54□□□□□ -0.24
COL11A1-203ENST00000370096 ARGLU1Q9NWB6 273 aaPredicted RBP13.54□□□□□ -0.24
COL11A1-203ENST00000370096 HDAC5Q9UQL6 1122 aa13.54□□□□□ -0.24
COL11A1-203ENST00000370096 HSP90AB3PQ58FF7 597 aa13.54□□□□□ -0.24
COL11A1-203ENST00000370096 RDXP35241 583 aaKnown RBP13.54□□□□□ -0.24
COL11A1-203ENST00000370096 HSP90AB2PQ58FF8 381 aa13.54□□□□□ -0.24
COL11A1-203ENST00000370096 CAGE1Q8TC20 777 aa13.54□□□□□ -0.24
COL11A1-203ENST00000370096 ZFYVE27Q5T4F4 411 aa13.53□□□□□ -0.24
COL11A1-203ENST00000370096 HSP90B2PQ58FF3 399 aa13.53□□□□□ -0.24
COL11A1-203ENST00000370096 COG6Q9Y2V7 657 aa13.53□□□□□ -0.24
COL11A1-203ENST00000370096 CTDP1Q9Y5B0 961 aaPredicted RBP13.53□□□□□ -0.24
COL11A1-203ENST00000370096 CCDC47Q96A33 483 aaKnown RBP13.53□□□□□ -0.24
COL11A1-203ENST00000370096 TRIM34Q9BYJ4 488 aa13.53□□□□□ -0.24
COL11A1-203ENST00000370096 ODF2Q5BJF6 829 aa13.53□□□□□ -0.24
COL11A1-203ENST00000370096 NFXL1Q6ZNB6 911 aa13.52□□□□□ -0.24
COL11A1-203ENST00000370096 CCDC191Q8NCU4 936 aa13.52□□□□□ -0.24
COL11A1-203ENST00000370096 CDR1P51861 262 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms