RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 NLRP1Q9C000 1473 aa7.59□□□□□ -1.19
UBE3D-202ENST00000369746 PKNOX2Q96KN3 472 aa7.58□□□□□ -1.2
UBE3D-202ENST00000369746 SUPT6HQ7KZ85 1726 aaKnown RBP7.58□□□□□ -1.2
UBE3D-202ENST00000369746 NUP153P49790 1475 aaKnown RBP7.58□□□□□ -1.2
UBE3D-202ENST00000369746 PLEKHH2Q8IVE3 1493 aa7.58□□□□□ -1.2
UBE3D-202ENST00000369746 FAM135BQ49AJ0 1406 aa7.58□□□□□ -1.2
UBE3D-202ENST00000369746 BCL11BQ9C0K0 894 aaPredicted RBP7.58□□□□□ -1.2
UBE3D-202ENST00000369746 ABCA6Q8N139 1617 aa7.57□□□□□ -1.2
UBE3D-202ENST00000369746 NCOA3Q9Y6Q9 1424 aa7.57□□□□□ -1.2
UBE3D-202ENST00000369746 ADGBQ8N7X0 1667 aa7.57□□□□□ -1.2
UBE3D-202ENST00000369746 NEURL4Q96JN8 1562 aa7.57□□□□□ -1.2
UBE3D-202ENST00000369746 RAPGEF3O95398 923 aa7.57□□□□□ -1.2
UBE3D-202ENST00000369746 LRP5O75197 1615 aa7.57□□□□□ -1.2
UBE3D-202ENST00000369746 ZC3H13Q5T200 1668 aaKnown RBP7.56□□□□□ -1.2
UBE3D-202ENST00000369746 CDK11BP21127 795 aaKnown RBP7.56□□□□□ -1.2
UBE3D-202ENST00000369746 VSIG10Q8N0Z9 540 aa7.56□□□□□ -1.2
UBE3D-202ENST00000369746 CDK11AQ9UQ88 783 aaPredicted RBP7.56□□□□□ -1.2
UBE3D-202ENST00000369746 ABCC1P33527 1531 aa7.56□□□□□ -1.2
UBE3D-202ENST00000369746 FGD6Q6ZV73 1430 aa7.56□□□□□ -1.2
UBE3D-202ENST00000369746 CFAP44Q96MT7 982 aa7.56□□□□□ -1.2
UBE3D-202ENST00000369746 PREX2Q70Z35 1606 aa7.56□□□□□ -1.2
UBE3D-202ENST00000369746 DNMT1P26358 1616 aaKnown RBP7.55□□□□□ -1.2
UBE3D-202ENST00000369746 ATP7AQ04656 1500 aa7.55□□□□□ -1.2
UBE3D-202ENST00000369746 EEA1Q15075 1411 aa7.55□□□□□ -1.2
UBE3D-202ENST00000369746 CNKSR2Q8WXI2 1034 aa7.55□□□□□ -1.2
UBE3D-202ENST00000369746 ZEB1P37275 1124 aaPredicted RBP7.54□□□□□ -1.2
UBE3D-202ENST00000369746 BRD2P25440 801 aaKnown RBP7.54□□□□□ -1.2
UBE3D-202ENST00000369746 KIAA1107Q9UPP5 1409 aa7.54□□□□□ -1.2
UBE3D-202ENST00000369746 NEFLP07196 543 aa7.53□□□□□ -1.2
UBE3D-202ENST00000369746 ARID4BQ4LE39 1312 aaPredicted RBP7.53□□□□□ -1.2
UBE3D-202ENST00000369746 SCAPERQ9BY12 1400 aa7.53□□□□□ -1.2
UBE3D-202ENST00000369746 INO80Q9ULG1 1556 aaPredicted RBP7.53□□□□□ -1.2
UBE3D-202ENST00000369746 TAF7LQ5H9L4 462 aa7.53□□□□□ -1.2
UBE3D-202ENST00000369746 SENP3Q9H4L4 574 aaPredicted RBP7.52□□□□□ -1.21
UBE3D-202ENST00000369746 ACIN1Q9UKV3 1341 aaKnown RBP7.52□□□□□ -1.21
UBE3D-202ENST00000369746 KIDINS220Q9ULH0 1771 aa7.51□□□□□ -1.21
UBE3D-202ENST00000369746 RTEL1-TNFRSF6BF6WH68 1400 aa7.51□□□□□ -1.21
UBE3D-202ENST00000369746 FKBP8Q14318 412 aa7.51□□□□□ -1.21
UBE3D-202ENST00000369746 EFCAB2Q5VUJ9 269 aa7.51□□□□□ -1.21
UBE3D-202ENST00000369746 IQGAP1P46940 1657 aa7.51□□□□□ -1.21
UBE3D-202ENST00000369746 SHPRHQ149N8 1683 aa7.51□□□□□ -1.21
UBE3D-202ENST00000369746 NWD1Q149M9 1564 aa7.51□□□□□ -1.21
UBE3D-202ENST00000369746 UBAP1LF5GYI3 381 aa7.5□□□□□ -1.21
UBE3D-202ENST00000369746 SETD1AO15047 1707 aaKnown RBP7.5□□□□□ -1.21
UBE3D-202ENST00000369746 HSPA2P54652 639 aa7.5□□□□□ -1.21
UBE3D-202ENST00000369746 PZPP20742 1482 aa7.49□□□□□ -1.21
UBE3D-202ENST00000369746 PLEKHD1A6NEE1 506 aa7.49□□□□□ -1.21
UBE3D-202ENST00000369746 CLIP1P30622 1438 aa7.49□□□□□ -1.21
UBE3D-202ENST00000369746 ANP32EQ9BTT0 268 aa7.48□□□□□ -1.21
UBE3D-202ENST00000369746 NKTRP30414 1462 aaKnown RBP7.48□□□□□ -1.21
UBE3D-202ENST00000369746 NCOA2Q15596 1464 aa7.47□□□□□ -1.21
UBE3D-202ENST00000369746 CCDC18Q5T9S5 1454 aa7.47□□□□□ -1.21
UBE3D-202ENST00000369746 SLIT1O75093 1534 aa7.47□□□□□ -1.21
UBE3D-202ENST00000369746 LRRC7Q96NW7 1537 aa7.47□□□□□ -1.21
UBE3D-202ENST00000369746 NHSL1Q5SYE7 1610 aa7.47□□□□□ -1.21
UBE3D-202ENST00000369746 TROQ12816 1431 aaPredicted RBP7.46□□□□□ -1.21
UBE3D-202ENST00000369746 AHDC1Q5TGY3 1603 aaPredicted RBP7.46□□□□□ -1.21
UBE3D-202ENST00000369746 EIF2AK4Q9P2K8 1649 aaKnown RBP7.46□□□□□ -1.21
UBE3D-202ENST00000369746 ANO8Q9HCE9 1232 aaPredicted RBP7.46□□□□□ -1.22
UBE3D-202ENST00000369746 ARHGAP23Q9P227 1491 aa7.46□□□□□ -1.22
UBE3D-202ENST00000369746 SAMD9LQ8IVG5 1584 aa7.46□□□□□ -1.22
UBE3D-202ENST00000369746 FMN1Q68DA7 1419 aa7.46□□□□□ -1.22
UBE3D-202ENST00000369746 CCDC136Q96JN2 1154 aa7.45□□□□□ -1.22
UBE3D-202ENST00000369746 ZMYM3Q14202 1370 aa7.45□□□□□ -1.22
UBE3D-202ENST00000369746 CDC42BPBQ9Y5S2 1711 aa7.45□□□□□ -1.22
UBE3D-202ENST00000369746 HSPA1LP34931 641 aa7.44□□□□□ -1.22
UBE3D-202ENST00000369746 CLTCQ00610 1675 aaKnown RBP7.44□□□□□ -1.22
UBE3D-202ENST00000369746 NPHP4O75161 1426 aaPredicted RBP7.44□□□□□ -1.22
UBE3D-202ENST00000369746 SPATA31A6Q5VVP1 1343 aa7.44□□□□□ -1.22
UBE3D-202ENST00000369746 SPHKAPQ2M3C7 1700 aa7.44□□□□□ -1.22
UBE3D-202ENST00000369746 IRX6P78412 446 aaPredicted RBP7.43□□□□□ -1.22
UBE3D-202ENST00000369746 CCDC125Q86Z20 511 aa7.43□□□□□ -1.22
UBE3D-202ENST00000369746 LAMC1P11047 1609 aa7.43□□□□□ -1.22
UBE3D-202ENST00000369746 ADRA2BP18089 450 aa7.43□□□□□ -1.22
UBE3D-202ENST00000369746 MROH1Q8NDA8 1641 aa7.43□□□□□ -1.22
UBE3D-202ENST00000369746 FGD1P98174 961 aa7.43□□□□□ -1.22
UBE3D-202ENST00000369746 KCNH8Q96L42 1107 aa7.42□□□□□ -1.22
UBE3D-202ENST00000369746 ESF1Q9H501 851 aaKnown RBP7.41□□□□□ -1.22
UBE3D-202ENST00000369746 A2MP01023 1474 aa7.41□□□□□ -1.22
UBE3D-202ENST00000369746 XIRP1Q702N8 1843 aaKnown RBP7.41□□□□□ -1.22
UBE3D-202ENST00000369746 ZNF772Q68DY9 489 aaPredicted RBP7.41□□□□□ -1.22
UBE3D-202ENST00000369746 PPARGC1BQ86YN6 1023 aaKnown RBP7.41□□□□□ -1.22
UBE3D-202ENST00000369746 POLR3GLQ9BT43 218 aa7.41□□□□□ -1.22
UBE3D-202ENST00000369746 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.4□□□□□ -1.22
UBE3D-202ENST00000369746 ARHGAP5Q13017 1502 aa7.4□□□□□ -1.22
UBE3D-202ENST00000369746 UNC13BO14795 1591 aa7.4□□□□□ -1.22
UBE3D-202ENST00000369746 PTPN23Q9H3S7 1636 aa7.4□□□□□ -1.22
UBE3D-202ENST00000369746 ARHGAP31Q2M1Z3 1444 aa7.4□□□□□ -1.23
UBE3D-202ENST00000369746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.4□□□□□ -1.23
UBE3D-202ENST00000369746 JCADQ9P266 1359 aa7.4□□□□□ -1.23
UBE3D-202ENST00000369746 DIP2AQ14689 1571 aa7.39□□□□□ -1.23
UBE3D-202ENST00000369746 MAST1Q9Y2H9 1570 aa7.39□□□□□ -1.23
UBE3D-202ENST00000369746 ZNF335Q9H4Z2 1342 aaPredicted RBP7.38□□□□□ -1.23
UBE3D-202ENST00000369746 THEMISQ8N1K5 641 aaPredicted RBP7.38□□□□□ -1.23
UBE3D-202ENST00000369746 RGS17Q9UGC6 210 aaPredicted RBP7.38□□□□□ -1.23
UBE3D-202ENST00000369746 UGGT1Q9NYU2 1555 aa7.38□□□□□ -1.23
UBE3D-202ENST00000369746 STRCP1A6NGW2 1772 aa7.38□□□□□ -1.23
UBE3D-202ENST00000369746 TNRQ92752 1358 aa7.38□□□□□ -1.23
UBE3D-202ENST00000369746 COL16A1Q07092 1604 aaPredicted RBP7.38□□□□□ -1.23
UBE3D-202ENST00000369746 DCCP43146 1447 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms