RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 BLMP54132 1417 aaPredicted RBP21.02■□□□□ 0.96
CHD1L-203ENST00000369259 ZMYM4Q5VZL5 1548 aa21.01■□□□□ 0.95
CHD1L-203ENST00000369259 NESP48681 1621 aa21.01■□□□□ 0.95
CHD1L-203ENST00000369259 PLEKHH2Q8IVE3 1493 aa21■□□□□ 0.95
CHD1L-203ENST00000369259 TOPBP1Q92547 1522 aa21■□□□□ 0.95
CHD1L-203ENST00000369259 DNAJC5BQ9UF47 199 aa20.99■□□□□ 0.95
CHD1L-203ENST00000369259 RGS3P49796 1198 aa20.98■□□□□ 0.95
CHD1L-203ENST00000369259 VSIG10Q8N0Z9 540 aa20.97■□□□□ 0.95
CHD1L-203ENST00000369259 ZMYND15Q9H091 742 aa20.97■□□□□ 0.95
CHD1L-203ENST00000369259 PKD2Q13563 968 aa20.97■□□□□ 0.95
CHD1L-203ENST00000369259 CDK13Q14004 1512 aaKnown RBP20.97■□□□□ 0.95
CHD1L-203ENST00000369259 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.94
CHD1L-203ENST00000369259 NAP1L5Q96NT1 182 aaPredicted RBP20.94■□□□□ 0.94
CHD1L-203ENST00000369259 PER1O15534 1290 aaPredicted RBP20.93■□□□□ 0.94
CHD1L-203ENST00000369259 RRP9O43818 475 aaKnown RBP20.93■□□□□ 0.94
CHD1L-203ENST00000369259 BECN1Q14457 450 aa20.93■□□□□ 0.94
CHD1L-203ENST00000369259 HSP90AA2PQ14568 343 aaPredicted RBP20.93■□□□□ 0.94
CHD1L-203ENST00000369259 PNNQ9H307 717 aaKnown RBP20.93■□□□□ 0.94
CHD1L-203ENST00000369259 USP19O94966 1318 aa20.93■□□□□ 0.94
CHD1L-203ENST00000369259 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.93■□□□□ 0.94
CHD1L-203ENST00000369259 CLCN1P35523 988 aa20.92■□□□□ 0.94
CHD1L-203ENST00000369259 ARHGEF12Q9NZN5 1544 aa20.92■□□□□ 0.94
CHD1L-203ENST00000369259 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
CHD1L-203ENST00000369259 HSP90AA1P07900 732 aaKnown RBP20.91■□□□□ 0.94
CHD1L-203ENST00000369259 DUSP27Q5VZP5 1158 aa20.88■□□□□ 0.93
CHD1L-203ENST00000369259 ARID3CA6NKF2 412 aa20.88■□□□□ 0.93
CHD1L-203ENST00000369259 XRCC6P12956 609 aaKnown RBP eCLIP20.88■□□□□ 0.93
CHD1L-203ENST00000369259 SLKQ9H2G2 1235 aaPredicted RBP20.87■□□□□ 0.93
CHD1L-203ENST00000369259 KDM2AQ9Y2K7 1162 aa20.87■□□□□ 0.93
CHD1L-203ENST00000369259 GOLGA6L3A6NEY3 463 aa20.86■□□□□ 0.93
CHD1L-203ENST00000369259 CC2D1BQ5T0F9 858 aaKnown RBP20.86■□□□□ 0.93
CHD1L-203ENST00000369259 TDRD9Q8NDG6 1382 aaKnown RBP20.86■□□□□ 0.93
CHD1L-203ENST00000369259 WDR62O43379 1518 aa20.86■□□□□ 0.93
CHD1L-203ENST00000369259 ZNF608Q9ULD9 1512 aaPredicted RBP20.85■□□□□ 0.93
CHD1L-203ENST00000369259 ANTXR1Q9H6X2 564 aa20.85■□□□□ 0.93
CHD1L-203ENST00000369259 FSD2A1L4K1 749 aa20.85■□□□□ 0.93
CHD1L-203ENST00000369259 KIAA0586Q9BVV6 1533 aa20.83■□□□□ 0.92
CHD1L-203ENST00000369259 LAMC3Q9Y6N6 1575 aa20.82■□□□□ 0.92
CHD1L-203ENST00000369259 ADAMTS8Q9UP79 889 aa20.82■□□□□ 0.92
CHD1L-203ENST00000369259 EIF3AQ14152 1382 aaKnown RBP20.82■□□□□ 0.92
CHD1L-203ENST00000369259 SEC24BO95487 1268 aa20.81■□□□□ 0.92
CHD1L-203ENST00000369259 PLEKHH1Q9ULM0 1364 aa20.81■□□□□ 0.92
CHD1L-203ENST00000369259 GOLGA2Q08379 1002 aa20.8■□□□□ 0.92
CHD1L-203ENST00000369259 VIRMAQ69YN4 1812 aaKnown RBP20.8■□□□□ 0.92
CHD1L-203ENST00000369259 ADGRL2O95490 1459 aa20.79■□□□□ 0.92
CHD1L-203ENST00000369259 ZNF521Q96K83 1311 aa20.79■□□□□ 0.92
CHD1L-203ENST00000369259 ARXQ96QS3 562 aa20.79■□□□□ 0.92
CHD1L-203ENST00000369259 ADGBQ8N7X0 1667 aa20.78■□□□□ 0.92
CHD1L-203ENST00000369259 PANK2Q9BZ23 570 aa20.78■□□□□ 0.92
CHD1L-203ENST00000369259 MAPK8IP3Q9UPT6 1336 aa20.77■□□□□ 0.92
CHD1L-203ENST00000369259 IGHDP01880 384 aa20.76■□□□□ 0.91
CHD1L-203ENST00000369259 PANK3Q9H999 370 aa20.76■□□□□ 0.91
CHD1L-203ENST00000369259 CAMSAP2Q08AD1 1489 aa20.76■□□□□ 0.91
CHD1L-203ENST00000369259 NLRP1Q9C000 1473 aa20.76■□□□□ 0.91
CHD1L-203ENST00000369259 ANKRD30AQ9BXX3 1397 aa20.75■□□□□ 0.91
CHD1L-203ENST00000369259 ANKRD50Q9ULJ7 1429 aa20.75■□□□□ 0.91
CHD1L-203ENST00000369259 SLFN5Q08AF3 891 aa20.74■□□□□ 0.91
CHD1L-203ENST00000369259 NUP155O75694 1391 aa20.74■□□□□ 0.91
CHD1L-203ENST00000369259 COL17A1Q9UMD9 1497 aaPredicted RBP20.73■□□□□ 0.91
CHD1L-203ENST00000369259 MCM4P33991 863 aa20.73■□□□□ 0.91
CHD1L-203ENST00000369259 WDR43Q15061 677 aaKnown RBP eCLIP20.73■□□□□ 0.91
CHD1L-203ENST00000369259 CFDP1Q9UEE9 299 aaPredicted RBP20.73■□□□□ 0.91
CHD1L-203ENST00000369259 MRE11P49959 708 aa20.72■□□□□ 0.91
CHD1L-203ENST00000369259 IQGAP2Q13576 1575 aa20.72■□□□□ 0.91
CHD1L-203ENST00000369259 TBC1D2Q9BYX2 928 aa20.72■□□□□ 0.91
CHD1L-203ENST00000369259 GZF1Q9H116 711 aaPredicted RBP20.72■□□□□ 0.91
CHD1L-203ENST00000369259 UPF2Q9HAU5 1272 aaKnown RBP20.71■□□□□ 0.91
CHD1L-203ENST00000369259 TRMT2AQ8IZ69 625 aaKnown RBP20.71■□□□□ 0.91
CHD1L-203ENST00000369259 CEP170Q5SW79 1584 aa20.7■□□□□ 0.9
CHD1L-203ENST00000369259 TBC1D32Q96NH3 1257 aa20.7■□□□□ 0.9
CHD1L-203ENST00000369259 DISP3Q9P2K9 1392 aa20.69■□□□□ 0.9
CHD1L-203ENST00000369259 PRAG1Q86YV5 1406 aa20.68■□□□□ 0.9
CHD1L-203ENST00000369259 ESPNB1AK53 854 aa20.68■□□□□ 0.9
CHD1L-203ENST00000369259 TESK2Q96S53 571 aa20.68■□□□□ 0.9
CHD1L-203ENST00000369259 CGNL1Q0VF96 1302 aa20.68■□□□□ 0.9
CHD1L-203ENST00000369259 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
CHD1L-203ENST00000369259 BCAR3O75815 825 aa20.67■□□□□ 0.9
CHD1L-203ENST00000369259 TRAK2O60296 914 aa20.67■□□□□ 0.9
CHD1L-203ENST00000369259 MYH16Q9H6N6 1097 aa20.67■□□□□ 0.9
CHD1L-203ENST00000369259 TRPM1Q7Z4N2 1603 aa20.66■□□□□ 0.9
CHD1L-203ENST00000369259 CLASP1Q7Z460 1538 aa20.66■□□□□ 0.9
CHD1L-203ENST00000369259 GPRASP1Q5JY77 1395 aa20.66■□□□□ 0.9
CHD1L-203ENST00000369259 NKTRP30414 1462 aaKnown RBP20.66■□□□□ 0.9
CHD1L-203ENST00000369259 NBPF1Q3BBV0 1214 aa20.66■□□□□ 0.9
CHD1L-203ENST00000369259 KDM5DQ9BY66 1539 aa20.66■□□□□ 0.9
CHD1L-203ENST00000369259 CROCC2H7BZ55 1655 aa20.65■□□□□ 0.9
CHD1L-203ENST00000369259 PPP2R1AP30153 589 aa20.65■□□□□ 0.9
CHD1L-203ENST00000369259 CLUAP1Q96AJ1 413 aa20.65■□□□□ 0.9
CHD1L-203ENST00000369259 ZNF777Q9ULD5 760 aaPredicted RBP20.65■□□□□ 0.9
CHD1L-203ENST00000369259 PDE3AQ14432 1141 aa20.64■□□□□ 0.89
CHD1L-203ENST00000369259 NUP153P49790 1475 aaKnown RBP20.64■□□□□ 0.89
CHD1L-203ENST00000369259 GRPEL1Q9HAV7 217 aa20.64■□□□□ 0.89
CHD1L-203ENST00000369259 ISY1Q9ULR0 285 aaKnown RBP20.64■□□□□ 0.89
CHD1L-203ENST00000369259 ERBINQ96RT1 1412 aa20.64■□□□□ 0.89
CHD1L-203ENST00000369259 TPM2P07951 284 aa20.63■□□□□ 0.89
CHD1L-203ENST00000369259 CHMP5Q9NZZ3 219 aa20.63■□□□□ 0.89
CHD1L-203ENST00000369259 TMF1P82094 1093 aa20.62■□□□□ 0.89
CHD1L-203ENST00000369259 GPATCH8Q9UKJ3 1502 aaKnown RBP20.62■□□□□ 0.89
CHD1L-203ENST00000369259 ZMYM3Q14202 1370 aa20.62■□□□□ 0.89
CHD1L-203ENST00000369259 ERBB4Q15303 1308 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms