RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 HSCBQ8IWL3 235 aa13.78□□□□□ -0.2
EBF3-202ENST00000368648 BCL2L13Q9BXK5 485 aa13.77□□□□□ -0.2
EBF3-202ENST00000368648 AKNAQ7Z591 1439 aa13.77□□□□□ -0.21
EBF3-202ENST00000368648 APBB1O00213 710 aa13.77□□□□□ -0.21
EBF3-202ENST00000368648 RSPH4AQ5TD94 716 aa13.76□□□□□ -0.21
EBF3-202ENST00000368648 A0A0U1RQG5 324 aaPredicted RBP13.76□□□□□ -0.21
EBF3-202ENST00000368648 PKNOX2Q96KN3 472 aa13.76□□□□□ -0.21
EBF3-202ENST00000368648 CFAP53Q96M91 514 aa13.76□□□□□ -0.21
EBF3-202ENST00000368648 WDR62O43379 1518 aa13.75□□□□□ -0.21
EBF3-202ENST00000368648 NUTM2FA1L443 756 aa13.75□□□□□ -0.21
EBF3-202ENST00000368648 WASHC2AQ641Q2 1341 aa13.75□□□□□ -0.21
EBF3-202ENST00000368648 MAGI1Q96QZ7 1491 aaPredicted RBP13.75□□□□□ -0.21
EBF3-202ENST00000368648 TMF1P82094 1093 aa13.75□□□□□ -0.21
EBF3-202ENST00000368648 CDCA7LQ96GN5 454 aa13.75□□□□□ -0.21
EBF3-202ENST00000368648 GRIN2AQ12879 1464 aa13.74□□□□□ -0.21
EBF3-202ENST00000368648 U2SURPO15042 1029 aaKnown RBP13.74□□□□□ -0.21
EBF3-202ENST00000368648 FOXD4L5Q5VV16 416 aaPredicted RBP13.72□□□□□ -0.21
EBF3-202ENST00000368648 FOXD4L4Q8WXT5 416 aaPredicted RBP13.72□□□□□ -0.21
EBF3-202ENST00000368648 TAOK2Q9UL54 1235 aa13.72□□□□□ -0.21
EBF3-202ENST00000368648 ST20-MTHFSA0A0A6YYL1 179 aa13.72□□□□□ -0.21
EBF3-202ENST00000368648 FAM161AQ3B820 660 aa13.71□□□□□ -0.21
EBF3-202ENST00000368648 AFAP1Q8N556 730 aa13.71□□□□□ -0.21
EBF3-202ENST00000368648 C11orf95C9JLR9 678 aaPredicted RBP13.71□□□□□ -0.21
EBF3-202ENST00000368648 FAM13BQ9NYF5 915 aa13.71□□□□□ -0.21
EBF3-202ENST00000368648 RRP7AQ9Y3A4 280 aaKnown RBP13.69□□□□□ -0.22
EBF3-202ENST00000368648 FOXD4L6Q3SYB3 417 aaPredicted RBP13.69□□□□□ -0.22
EBF3-202ENST00000368648 FOXD4L3Q6VB84 417 aaPredicted RBP13.69□□□□□ -0.22
EBF3-202ENST00000368648 COG6Q9Y2V7 657 aa13.69□□□□□ -0.22
EBF3-202ENST00000368648 CDK11BP21127 795 aaKnown RBP13.68□□□□□ -0.22
EBF3-202ENST00000368648 KIAA0586Q9BVV6 1533 aa13.68□□□□□ -0.22
EBF3-202ENST00000368648 EID1Q9Y6B2 187 aa13.68□□□□□ -0.22
EBF3-202ENST00000368648 ROCK2O75116 1388 aaKnown RBP13.67□□□□□ -0.22
EBF3-202ENST00000368648 TRAK1Q9UPV9 953 aa13.67□□□□□ -0.22
EBF3-202ENST00000368648 DNAJC5Q9H3Z4 198 aa13.67□□□□□ -0.22
EBF3-202ENST00000368648 KTN1Q86UP2 1357 aaKnown RBP13.66□□□□□ -0.22
EBF3-202ENST00000368648 MAPK8IP3Q9UPT6 1336 aa13.66□□□□□ -0.22
EBF3-202ENST00000368648 NLRP13Q86W25 1043 aa13.66□□□□□ -0.22
EBF3-202ENST00000368648 GOLGA2Q08379 1002 aa13.66□□□□□ -0.22
EBF3-202ENST00000368648 PRXQ9BXM0 1461 aa13.65□□□□□ -0.22
EBF3-202ENST00000368648 PRDM2Q13029 1718 aa13.65□□□□□ -0.22
EBF3-202ENST00000368648 NOL8Q76FK4 1167 aaKnown RBP13.65□□□□□ -0.22
EBF3-202ENST00000368648 EIF4G3O43432 1585 aaKnown RBP13.65□□□□□ -0.22
EBF3-202ENST00000368648 KIF7Q2M1P5 1343 aa13.64□□□□□ -0.23
EBF3-202ENST00000368648 MORC1Q86VD1 984 aa13.64□□□□□ -0.23
EBF3-202ENST00000368648 BACH2Q9BYV9 841 aa13.63□□□□□ -0.23
EBF3-202ENST00000368648 ERICH3Q5RHP9 1530 aa13.63□□□□□ -0.23
EBF3-202ENST00000368648 RBM10P98175 930 aaKnown RBP13.63□□□□□ -0.23
EBF3-202ENST00000368648 ITPRIPQ8IWB1 547 aa13.63□□□□□ -0.23
EBF3-202ENST00000368648 PHLDB1Q86UU1 1377 aa13.63□□□□□ -0.23
EBF3-202ENST00000368648 BCL11BQ9C0K0 894 aaPredicted RBP13.62□□□□□ -0.23
EBF3-202ENST00000368648 RALBP1Q15311 655 aa13.62□□□□□ -0.23
EBF3-202ENST00000368648 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
EBF3-202ENST00000368648 GBP4Q96PP9 640 aa13.62□□□□□ -0.23
EBF3-202ENST00000368648 CENPQQ7L2Z9 268 aaPredicted RBP13.62□□□□□ -0.23
EBF3-202ENST00000368648 MS4A1P11836 297 aa13.61□□□□□ -0.23
EBF3-202ENST00000368648 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
EBF3-202ENST00000368648 KIF21BO75037 1637 aa13.6□□□□□ -0.23
EBF3-202ENST00000368648 HDGFL2Q7Z4V5 671 aaPredicted RBP13.59□□□□□ -0.23
EBF3-202ENST00000368648 PANK3Q9H999 370 aa13.59□□□□□ -0.23
EBF3-202ENST00000368648 DDX49Q9Y6V7 483 aaKnown RBP13.59□□□□□ -0.23
EBF3-202ENST00000368648 CCDC144AA2RUR9 1427 aa13.59□□□□□ -0.23
EBF3-202ENST00000368648 KIF15Q9NS87 1388 aa13.59□□□□□ -0.23
EBF3-202ENST00000368648 APAF1O14727 1248 aa13.59□□□□□ -0.23
EBF3-202ENST00000368648 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.23
EBF3-202ENST00000368648 RAPGEF3O95398 923 aa13.58□□□□□ -0.23
EBF3-202ENST00000368648 BIVM-ERCC5R4GMW8 1640 aa13.58□□□□□ -0.24
EBF3-202ENST00000368648 CCDC7Q96M83 1385 aa13.57□□□□□ -0.24
EBF3-202ENST00000368648 FGD6Q6ZV73 1430 aa13.57□□□□□ -0.24
EBF3-202ENST00000368648 MPNDQ8N594 471 aa13.57□□□□□ -0.24
EBF3-202ENST00000368648 NGDNQ8NEJ9 315 aaKnown RBP13.57□□□□□ -0.24
EBF3-202ENST00000368648 RWDD1Q9H446 243 aaPredicted RBP13.57□□□□□ -0.24
EBF3-202ENST00000368648 MYOM3Q5VTT5 1437 aa13.57□□□□□ -0.24
EBF3-202ENST00000368648 CALD1Q05682 793 aaKnown RBP13.57□□□□□ -0.24
EBF3-202ENST00000368648 PLB1Q6P1J6 1458 aa13.57□□□□□ -0.24
EBF3-202ENST00000368648 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
EBF3-202ENST00000368648 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
EBF3-202ENST00000368648 UACAQ9BZF9 1416 aa13.56□□□□□ -0.24
EBF3-202ENST00000368648 U2AF1L5P0DN76 240 aaPredicted RBP13.56□□□□□ -0.24
EBF3-202ENST00000368648 U2AF1Q01081 240 aaKnown RBP eCLIP13.56□□□□□ -0.24
EBF3-202ENST00000368648 PDE3BQ13370 1112 aa13.56□□□□□ -0.24
EBF3-202ENST00000368648 FAM43AQ8N2R8 423 aa13.56□□□□□ -0.24
EBF3-202ENST00000368648 PANK1Q8TE04 598 aa13.55□□□□□ -0.24
EBF3-202ENST00000368648 IQGAP2Q13576 1575 aa13.55□□□□□ -0.24
EBF3-202ENST00000368648 CASKIN1Q8WXD9 1431 aa13.54□□□□□ -0.24
EBF3-202ENST00000368648 CSB-PGBD3P0DP91 1061 aa13.54□□□□□ -0.24
EBF3-202ENST00000368648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.54□□□□□ -0.24
EBF3-202ENST00000368648 CENPJQ9HC77 1338 aaPredicted RBP13.54□□□□□ -0.24
EBF3-202ENST00000368648 ELL2O00472 640 aaPredicted RBP13.54□□□□□ -0.24
EBF3-202ENST00000368648 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
EBF3-202ENST00000368648 R3HCC1Q9Y3T6 440 aaKnown RBP13.54□□□□□ -0.24
EBF3-202ENST00000368648 SMC4Q9NTJ3 1288 aa13.53□□□□□ -0.24
EBF3-202ENST00000368648 NCOA2Q15596 1464 aa13.53□□□□□ -0.24
EBF3-202ENST00000368648 LRRC9Q6ZRR7 1453 aa13.53□□□□□ -0.24
EBF3-202ENST00000368648 MINK1Q8N4C8 1332 aaPredicted RBP13.52□□□□□ -0.24
EBF3-202ENST00000368648 VGFO15240 615 aaPredicted RBP13.52□□□□□ -0.24
EBF3-202ENST00000368648 USP47Q96K76 1375 aa13.52□□□□□ -0.25
EBF3-202ENST00000368648 NBPF8Q3BBV2 869 aa13.52□□□□□ -0.25
EBF3-202ENST00000368648 CHAF1AQ13111 956 aaPredicted RBP13.52□□□□□ -0.25
EBF3-202ENST00000368648 CASC1Q6TDU7 716 aa13.52□□□□□ -0.25
EBF3-202ENST00000368648 KIAA2012Q0VF49 1180 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms