RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 DCAF11Q8TEB1 546 aa10.98□□□□□ -0.65
SSR2-202ENST00000368311 HDAC5Q9UQL6 1122 aa10.98□□□□□ -0.65
SSR2-202ENST00000368311 ROCK1Q13464 1354 aa10.98□□□□□ -0.65
SSR2-202ENST00000368311 FGD6Q6ZV73 1430 aa10.98□□□□□ -0.65
SSR2-202ENST00000368311 ARHGEF11O15085 1522 aa10.98□□□□□ -0.65
SSR2-202ENST00000368311 MAP3K1Q13233 1512 aa10.98□□□□□ -0.65
SSR2-202ENST00000368311 ITSN2Q9NZM3 1697 aa10.97□□□□□ -0.65
SSR2-202ENST00000368311 ANKRD50Q9ULJ7 1429 aa10.97□□□□□ -0.65
SSR2-202ENST00000368311 LRRC9Q6ZRR7 1453 aa10.97□□□□□ -0.65
SSR2-202ENST00000368311 MAGI2Q86UL8 1455 aa10.97□□□□□ -0.65
SSR2-202ENST00000368311 KIAA1107Q9UPP5 1409 aa10.96□□□□□ -0.65
SSR2-202ENST00000368311 MPHOSPH9Q99550 1183 aa10.95□□□□□ -0.66
SSR2-202ENST00000368311 MYH16Q9H6N6 1097 aa10.94□□□□□ -0.66
SSR2-202ENST00000368311 ROCK2O75116 1388 aaKnown RBP10.94□□□□□ -0.66
SSR2-202ENST00000368311 TNRQ92752 1358 aa10.94□□□□□ -0.66
SSR2-202ENST00000368311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.94□□□□□ -0.66
SSR2-202ENST00000368311 STK26Q9P289 416 aa10.94□□□□□ -0.66
SSR2-202ENST00000368311 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
SSR2-202ENST00000368311 ANKRD30BQ9BXX2 1392 aa10.93□□□□□ -0.66
SSR2-202ENST00000368311 ATP10AO60312 1499 aa10.93□□□□□ -0.66
SSR2-202ENST00000368311 MS4A1P11836 297 aa10.92□□□□□ -0.66
SSR2-202ENST00000368311 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
SSR2-202ENST00000368311 CNGB1Q14028 1251 aaPredicted RBP10.92□□□□□ -0.66
SSR2-202ENST00000368311 LMOD3Q0VAK6 560 aa10.92□□□□□ -0.66
SSR2-202ENST00000368311 RTEL1-TNFRSF6BF6WH68 1400 aa10.91□□□□□ -0.66
SSR2-202ENST00000368311 C11orf95C9JLR9 678 aaPredicted RBP10.91□□□□□ -0.66
SSR2-202ENST00000368311 MSH6P52701 1360 aa10.91□□□□□ -0.66
SSR2-202ENST00000368311 DHX29Q7Z478 1369 aaKnown RBP10.9□□□□□ -0.66
SSR2-202ENST00000368311 RAPGEF3O95398 923 aa10.9□□□□□ -0.66
SSR2-202ENST00000368311 AFAP1Q8N556 730 aa10.9□□□□□ -0.66
SSR2-202ENST00000368311 SMG6Q86US8 1419 aaKnown RBP10.89□□□□□ -0.67
SSR2-202ENST00000368311 CADPS2Q86UW7 1296 aa10.88□□□□□ -0.67
SSR2-202ENST00000368311 ZFYVE16Q7Z3T8 1539 aa10.88□□□□□ -0.67
SSR2-202ENST00000368311 ZNF316A6NFI3 1004 aaPredicted RBP10.88□□□□□ -0.67
SSR2-202ENST00000368311 ERBINQ96RT1 1412 aa10.88□□□□□ -0.67
SSR2-202ENST00000368311 AMPHP49418 695 aa10.88□□□□□ -0.67
SSR2-202ENST00000368311 MORC1Q86VD1 984 aa10.88□□□□□ -0.67
SSR2-202ENST00000368311 RUSC2Q8N2Y8 1516 aa10.87□□□□□ -0.67
SSR2-202ENST00000368311 HSP90B1P14625 803 aaKnown RBP10.87□□□□□ -0.67
SSR2-202ENST00000368311 CGNL1Q0VF96 1302 aa10.87□□□□□ -0.67
SSR2-202ENST00000368311 COG3Q96JB2 828 aa10.87□□□□□ -0.67
SSR2-202ENST00000368311 DUOX2Q9NRD8 1548 aa10.86□□□□□ -0.67
SSR2-202ENST00000368311 CHD1O14646 1710 aa10.86□□□□□ -0.67
SSR2-202ENST00000368311 A2MP01023 1474 aa10.86□□□□□ -0.67
SSR2-202ENST00000368311 TIAM1Q13009 1591 aa10.85□□□□□ -0.67
SSR2-202ENST00000368311 ZNF692Q9BU19 519 aaPredicted RBP10.85□□□□□ -0.67
SSR2-202ENST00000368311 PLEKHG5O94827 1062 aa10.85□□□□□ -0.67
SSR2-202ENST00000368311 RPRD2Q5VT52 1461 aaKnown RBP10.84□□□□□ -0.67
SSR2-202ENST00000368311 ARAP1Q96P48 1450 aa10.84□□□□□ -0.67
SSR2-202ENST00000368311 CAMSAP2Q08AD1 1489 aa10.84□□□□□ -0.67
SSR2-202ENST00000368311 PPM1GO15355 546 aaPredicted RBP10.84□□□□□ -0.67
SSR2-202ENST00000368311 ATP10BO94823 1461 aa10.83□□□□□ -0.68
SSR2-202ENST00000368311 WWC1Q8IX03 1113 aa10.83□□□□□ -0.68
SSR2-202ENST00000368311 KDM6BO15054 1643 aa10.83□□□□□ -0.68
SSR2-202ENST00000368311 C1orf141Q5JVX7 400 aa10.83□□□□□ -0.68
SSR2-202ENST00000368311 ARXQ96QS3 562 aa10.83□□□□□ -0.68
SSR2-202ENST00000368311 UBAP1LF5GYI3 381 aa10.82□□□□□ -0.68
SSR2-202ENST00000368311 NGLY1Q96IV0 654 aa10.82□□□□□ -0.68
SSR2-202ENST00000368311 SENP3Q9H4L4 574 aaPredicted RBP10.82□□□□□ -0.68
SSR2-202ENST00000368311 KANK4Q5T7N3 995 aaPredicted RBP10.81□□□□□ -0.68
SSR2-202ENST00000368311 GOLGA2Q08379 1002 aa10.81□□□□□ -0.68
SSR2-202ENST00000368311 MAPKBP1O60336 1514 aa10.81□□□□□ -0.68
SSR2-202ENST00000368311 NLRP13Q86W25 1043 aa10.81□□□□□ -0.68
SSR2-202ENST00000368311 PIP4K2BP78356 416 aa10.8□□□□□ -0.68
SSR2-202ENST00000368311 MAGI3Q5TCQ9 1506 aa10.8□□□□□ -0.68
SSR2-202ENST00000368311 CDK13Q14004 1512 aaKnown RBP10.79□□□□□ -0.68
SSR2-202ENST00000368311 KDM5BQ9UGL1 1544 aa10.79□□□□□ -0.68
SSR2-202ENST00000368311 CENPJQ9HC77 1338 aaPredicted RBP10.79□□□□□ -0.68
SSR2-202ENST00000368311 KCNH5Q8NCM2 988 aa10.79□□□□□ -0.68
SSR2-202ENST00000368311 SHANK2Q9UPX8 1470 aa10.78□□□□□ -0.68
SSR2-202ENST00000368311 KTN1Q86UP2 1357 aaKnown RBP10.78□□□□□ -0.68
SSR2-202ENST00000368311 LMTK3Q96Q04 1460 aa10.78□□□□□ -0.68
SSR2-202ENST00000368311 HSP90AB1P08238 724 aaKnown RBP10.78□□□□□ -0.68
SSR2-202ENST00000368311 G3V3G9 751 aa10.77□□□□□ -0.68
SSR2-202ENST00000368311 DCAF8Q5TAQ9 597 aa10.77□□□□□ -0.68
SSR2-202ENST00000368311 SAFB2Q14151 953 aaKnown RBP eCLIP10.77□□□□□ -0.69
SSR2-202ENST00000368311 ESCO1Q5FWF5 840 aa10.77□□□□□ -0.69
SSR2-202ENST00000368311 RAPGEF4Q8WZA2 1011 aa10.77□□□□□ -0.69
SSR2-202ENST00000368311 PCF11O94913 1555 aaKnown RBP10.77□□□□□ -0.69
SSR2-202ENST00000368311 RAB3GAP2Q9H2M9 1393 aa10.77□□□□□ -0.69
SSR2-202ENST00000368311 ATAD2Q6PL18 1390 aa10.76□□□□□ -0.69
SSR2-202ENST00000368311 RALBP1Q15311 655 aa10.75□□□□□ -0.69
SSR2-202ENST00000368311 PDE3BQ13370 1112 aa10.75□□□□□ -0.69
SSR2-202ENST00000368311 CFAP44Q96MT7 982 aa10.75□□□□□ -0.69
SSR2-202ENST00000368311 ARAP3Q8WWN8 1544 aa10.75□□□□□ -0.69
SSR2-202ENST00000368311 TTC5Q8N0Z6 440 aa10.74□□□□□ -0.69
SSR2-202ENST00000368311 NUP153P49790 1475 aaKnown RBP10.74□□□□□ -0.69
SSR2-202ENST00000368311 NGEFQ8N5V2 710 aa10.73□□□□□ -0.69
SSR2-202ENST00000368311 RIMBP3CA6NJZ7 1639 aa10.73□□□□□ -0.69
SSR2-202ENST00000368311 RIMBP3BA6NNM3 1639 aa10.73□□□□□ -0.69
SSR2-202ENST00000368311 RIMBP3Q9UFD9 1639 aa10.73□□□□□ -0.69
SSR2-202ENST00000368311 U2SURPO15042 1029 aaKnown RBP10.73□□□□□ -0.69
SSR2-202ENST00000368311 CLASP1Q7Z460 1538 aa10.73□□□□□ -0.69
SSR2-202ENST00000368311 TRAK1Q9UPV9 953 aa10.73□□□□□ -0.69
SSR2-202ENST00000368311 TRAPPC8Q9Y2L5 1435 aa10.72□□□□□ -0.69
SSR2-202ENST00000368311 NPHP3Q7Z494 1330 aa10.72□□□□□ -0.69
SSR2-202ENST00000368311 MSH5O43196 834 aa10.71□□□□□ -0.69
SSR2-202ENST00000368311 GTF2E1P29083 439 aaPredicted RBP10.71□□□□□ -0.69
SSR2-202ENST00000368311 NINLQ9Y2I6 1382 aa10.71□□□□□ -0.69
SSR2-202ENST00000368311 ABCA8O94911 1581 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms