RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 NOP58Q9Y2X3 529 aaKnown RBP15.72■□□□□ 0.11
PTPRK-203ENST00000368207 SYNJ2O15056 1496 aa15.72■□□□□ 0.11
PTPRK-203ENST00000368207 CSB-PGBD3P0DP91 1061 aa15.71■□□□□ 0.11
PTPRK-203ENST00000368207 ERICH6BQ5W0A0 696 aa15.71■□□□□ 0.11
PTPRK-203ENST00000368207 EFCAB5A4FU69 1503 aa15.71■□□□□ 0.11
PTPRK-203ENST00000368207 NCLP19338 710 aaKnown RBP15.71■□□□□ 0.1
PTPRK-203ENST00000368207 LTV1Q96GA3 475 aaPredicted RBP15.71■□□□□ 0.1
PTPRK-203ENST00000368207 ANP32EQ9BTT0 268 aa15.7■□□□□ 0.1
PTPRK-203ENST00000368207 SMC4Q9NTJ3 1288 aa15.7■□□□□ 0.1
PTPRK-203ENST00000368207 EVC2Q86UK5 1308 aa15.69■□□□□ 0.1
PTPRK-203ENST00000368207 GOLGA6L22H0YM25 854 aa15.69■□□□□ 0.1
PTPRK-203ENST00000368207 CALD1Q05682 793 aaKnown RBP15.69■□□□□ 0.1
PTPRK-203ENST00000368207 PDE3BQ13370 1112 aa15.69■□□□□ 0.1
PTPRK-203ENST00000368207 ARHGAP5Q13017 1502 aa15.69■□□□□ 0.1
PTPRK-203ENST00000368207 CCDC7Q96M83 1385 aa15.69■□□□□ 0.1
PTPRK-203ENST00000368207 AMPHP49418 695 aa15.68■□□□□ 0.1
PTPRK-203ENST00000368207 CGNL1Q0VF96 1302 aa15.66■□□□□ 0.1
PTPRK-203ENST00000368207 TIAM1Q13009 1591 aa15.66■□□□□ 0.1
PTPRK-203ENST00000368207 TMEM132EQ6IEE7 984 aa15.66■□□□□ 0.1
PTPRK-203ENST00000368207 CENPJQ9HC77 1338 aaPredicted RBP15.66■□□□□ 0.1
PTPRK-203ENST00000368207 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
PTPRK-203ENST00000368207 TROQ12816 1431 aaPredicted RBP15.66■□□□□ 0.1
PTPRK-203ENST00000368207 WASHC2AQ641Q2 1341 aa15.66■□□□□ 0.1
PTPRK-203ENST00000368207 PLIN1O60240 522 aa15.65■□□□□ 0.1
PTPRK-203ENST00000368207 BCL2L13Q9BXK5 485 aa15.65■□□□□ 0.1
PTPRK-203ENST00000368207 APAF1O14727 1248 aa15.65■□□□□ 0.1
PTPRK-203ENST00000368207 NPHP1O15259 732 aa15.64■□□□□ 0.09
PTPRK-203ENST00000368207 HSP90AB1P08238 724 aaKnown RBP15.64■□□□□ 0.09
PTPRK-203ENST00000368207 KCNJ4P48050 445 aa15.64■□□□□ 0.09
PTPRK-203ENST00000368207 ELL2O00472 640 aaPredicted RBP15.64■□□□□ 0.09
PTPRK-203ENST00000368207 RWDD1Q9H446 243 aaPredicted RBP15.64■□□□□ 0.09
PTPRK-203ENST00000368207 SPRYD3Q8NCJ5 442 aa15.63■□□□□ 0.09
PTPRK-203ENST00000368207 TAOK2Q9UL54 1235 aa15.63■□□□□ 0.09
PTPRK-203ENST00000368207 CFAP70Q5T0N1 1121 aa15.63■□□□□ 0.09
PTPRK-203ENST00000368207 ZNF330Q9Y3S2 320 aaPredicted RBP15.63■□□□□ 0.09
PTPRK-203ENST00000368207 EHBP1L1Q8N3D4 1523 aa15.62■□□□□ 0.09
PTPRK-203ENST00000368207 ZBED9Q6R2W3 1325 aa15.62■□□□□ 0.09
PTPRK-203ENST00000368207 NBPF1Q3BBV0 1214 aa15.62■□□□□ 0.09
PTPRK-203ENST00000368207 NBPF8Q3BBV2 869 aa15.62■□□□□ 0.09
PTPRK-203ENST00000368207 CDK13Q14004 1512 aaKnown RBP15.62■□□□□ 0.09
PTPRK-203ENST00000368207 C9orf84Q5VXU9 1444 aa15.62■□□□□ 0.09
PTPRK-203ENST00000368207 MIA2Q96PC5 1412 aa15.61■□□□□ 0.09
PTPRK-203ENST00000368207 STK31Q9BXU1 1019 aa15.61■□□□□ 0.09
PTPRK-203ENST00000368207 COG3Q96JB2 828 aa15.61■□□□□ 0.09
PTPRK-203ENST00000368207 TSHZ2Q9NRE2 1034 aa15.61■□□□□ 0.09
PTPRK-203ENST00000368207 HFM1A2PYH4 1435 aa15.6■□□□□ 0.09
PTPRK-203ENST00000368207 SLC4A10Q6U841 1118 aa15.6■□□□□ 0.09
PTPRK-203ENST00000368207 KIAA0586Q9BVV6 1533 aa15.6■□□□□ 0.09
PTPRK-203ENST00000368207 TCERG1O14776 1098 aaKnown RBP15.6■□□□□ 0.09
PTPRK-203ENST00000368207 FGD1P98174 961 aa15.59■□□□□ 0.09
PTPRK-203ENST00000368207 SCAPERQ9BY12 1400 aa15.58■□□□□ 0.09
PTPRK-203ENST00000368207 HSCBQ8IWL3 235 aa15.58■□□□□ 0.08
PTPRK-203ENST00000368207 EPRSP07814 1512 aaKnown RBP15.57■□□□□ 0.08
PTPRK-203ENST00000368207 EXOC6Q8TAG9 804 aa15.57■□□□□ 0.08
PTPRK-203ENST00000368207 LMOD3Q0VAK6 560 aa15.57■□□□□ 0.08
PTPRK-203ENST00000368207 CNTLNQ9NXG0 1405 aa15.56■□□□□ 0.08
PTPRK-203ENST00000368207 STAC3Q96MF2 364 aa15.56■□□□□ 0.08
PTPRK-203ENST00000368207 CABP2Q9NPB3 220 aa15.56■□□□□ 0.08
PTPRK-203ENST00000368207 PMFBP1Q8TBY8 1022 aa15.56■□□□□ 0.08
PTPRK-203ENST00000368207 NAP1L2Q9ULW6 460 aaPredicted RBP15.56■□□□□ 0.08
PTPRK-203ENST00000368207 RAPGEF3O95398 923 aa15.56■□□□□ 0.08
PTPRK-203ENST00000368207 HECW1Q76N89 1606 aa15.56■□□□□ 0.08
PTPRK-203ENST00000368207 GGNBP2Q9H3C7 697 aa15.55■□□□□ 0.08
PTPRK-203ENST00000368207 DAPK1P53355 1430 aa15.55■□□□□ 0.08
PTPRK-203ENST00000368207 KIAA1107Q9UPP5 1409 aa15.55■□□□□ 0.08
PTPRK-203ENST00000368207 TRIM44Q96DX7 344 aaPredicted RBP15.55■□□□□ 0.08
PTPRK-203ENST00000368207 RRP1P56182 461 aaKnown RBP15.54■□□□□ 0.08
PTPRK-203ENST00000368207 E9PSI1 815 aa15.54■□□□□ 0.08
PTPRK-203ENST00000368207 URB2Q14146 1524 aaKnown RBP15.53■□□□□ 0.08
PTPRK-203ENST00000368207 NAIPQ13075 1403 aa15.53■□□□□ 0.08
PTPRK-203ENST00000368207 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
PTPRK-203ENST00000368207 DIAPH1O60610 1272 aaKnown RBP15.52■□□□□ 0.08
PTPRK-203ENST00000368207 IQGAP2Q13576 1575 aa15.52■□□□□ 0.08
PTPRK-203ENST00000368207 CRBNQ96SW2 442 aa15.52■□□□□ 0.08
PTPRK-203ENST00000368207 PLB1Q6P1J6 1458 aa15.52■□□□□ 0.08
PTPRK-203ENST00000368207 COG6Q9Y2V7 657 aa15.52■□□□□ 0.08
PTPRK-203ENST00000368207 SLKQ9H2G2 1235 aaPredicted RBP15.51■□□□□ 0.07
PTPRK-203ENST00000368207 MFAP1P55081 439 aaKnown RBP15.51■□□□□ 0.07
PTPRK-203ENST00000368207 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTPRK-203ENST00000368207 CCDC9Q9Y3X0 531 aaKnown RBP15.49■□□□□ 0.07
PTPRK-203ENST00000368207 ZNF608Q9ULD9 1512 aaPredicted RBP15.49■□□□□ 0.07
PTPRK-203ENST00000368207 MCCP23508 829 aa15.49■□□□□ 0.07
PTPRK-203ENST00000368207 SUPT6HQ7KZ85 1726 aaKnown RBP15.49■□□□□ 0.07
PTPRK-203ENST00000368207 ARHGEF11O15085 1522 aa15.49■□□□□ 0.07
PTPRK-203ENST00000368207 RIPK4P57078 832 aa15.49■□□□□ 0.07
PTPRK-203ENST00000368207 ADAMTS8Q9UP79 889 aa15.48■□□□□ 0.07
PTPRK-203ENST00000368207 ZRSR1Q15695 479 aaKnown RBP15.48■□□□□ 0.07
PTPRK-203ENST00000368207 ZKSCAN2Q63HK3 967 aa15.47■□□□□ 0.07
PTPRK-203ENST00000368207 CHMP4AQ9BY43 222 aa15.47■□□□□ 0.07
PTPRK-203ENST00000368207 HMOX1P09601 288 aa15.47■□□□□ 0.07
PTPRK-203ENST00000368207 CHMP3Q9Y3E7 222 aa15.47■□□□□ 0.07
PTPRK-203ENST00000368207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.075e-6■■□□□ 12.8
PTPRK-203ENST00000368207 HMMRO75330 724 aa15.47■□□□□ 0.07
PTPRK-203ENST00000368207 PTMAP06454 111 aaKnown RBP15.47■□□□□ 0.07
PTPRK-203ENST00000368207 MTHFSP49914 203 aa15.46■□□□□ 0.07
PTPRK-203ENST00000368207 KIAA1211Q6ZU35 1233 aa15.46■□□□□ 0.07
PTPRK-203ENST00000368207 PLEKHH2Q8IVE3 1493 aa15.46■□□□□ 0.07
PTPRK-203ENST00000368207 PLCB2Q00722 1185 aa15.46■□□□□ 0.07
PTPRK-203ENST00000368207 GRIN2AQ12879 1464 aa15.46■□□□□ 0.07
PTPRK-203ENST00000368207 SLC12A5Q9H2X9 1139 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms