RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 RABGEF1Q9UJ41 708 aa12.13□□□□□ -0.47
PTPRK-202ENST00000368205 COL9A1P20849 921 aa12.12□□□□□ -0.47
PTPRK-202ENST00000368205 THSD4Q6ZMP0 1018 aa12.12□□□□□ -0.47
PTPRK-202ENST00000368205 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
PTPRK-202ENST00000368205 PDIA6Q15084 440 aa12.1□□□□□ -0.47
PTPRK-202ENST00000368205 WNT2BQ93097 391 aa12.1□□□□□ -0.47
PTPRK-202ENST00000368205 PTPN5P54829 565 aa12.09□□□□□ -0.47
PTPRK-202ENST00000368205 PROX2Q3B8N5 592 aa12.09□□□□□ -0.47
PTPRK-202ENST00000368205 C6orf132Q5T0Z8 1188 aa12.09□□□□□ -0.47
PTPRK-202ENST00000368205 ONECUT3O60422 494 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-202ENST00000368205 PAXIP1Q6ZW49 1069 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-202ENST00000368205 SPDYE16A6NNV3 312 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-202ENST00000368205 ARIH1Q9Y4X5 557 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-202ENST00000368205 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
PTPRK-202ENST00000368205 E2F4Q16254 413 aa12.05□□□□□ -0.48
PTPRK-202ENST00000368205 LAPTM4BQ86VI4 370 aa12.05□□□□□ -0.48
PTPRK-202ENST00000368205 DDX12PQ92771 950 aa12.05□□□□□ -0.48
PTPRK-202ENST00000368205 EN1Q05925 392 aaPredicted RBP12.02□□□□□ -0.49
PTPRK-202ENST00000368205 IFFO2Q5TF58 517 aa12.02□□□□□ -0.49
PTPRK-202ENST00000368205 TRIM6-TRIM34B2RNG4 842 aa12.01□□□□□ -0.49
PTPRK-202ENST00000368205 RBM33Q96EV2 1170 aaKnown RBP12.01□□□□□ -0.49
PTPRK-202ENST00000368205 WDR70Q9NW82 654 aa12.01□□□□□ -0.49
PTPRK-202ENST00000368205 KIAA1468Q9P260 1216 aa12.01□□□□□ -0.49
PTPRK-202ENST00000368205 NBR1Q14596 966 aa12□□□□□ -0.49
PTPRK-202ENST00000368205 ANKK1Q8NFD2 765 aa12□□□□□ -0.49
PTPRK-202ENST00000368205 MAP3K7O43318 606 aa11.96□□□□□ -0.49
PTPRK-202ENST00000368205 ZFRQ96KR1 1074 aaKnown RBP11.96□□□□□ -0.49
PTPRK-202ENST00000368205 SOWAHBA6NEL2 793 aa11.95□□□□□ -0.5
PTPRK-202ENST00000368205 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
PTPRK-202ENST00000368205 FAM98CQ17RN3 349 aaKnown RBP11.93□□□□□ -0.5
PTPRK-202ENST00000368205 SEPT9Q9UHD8 586 aaPredicted RBP11.93□□□□□ -0.5
PTPRK-202ENST00000368205 BCAMP50895 628 aa11.92□□□□□ -0.5
PTPRK-202ENST00000368205 NYAP1Q6ZVC0 841 aa11.92□□□□□ -0.5
PTPRK-202ENST00000368205 CERKQ8TCT0 537 aa11.91□□□□□ -0.5
PTPRK-202ENST00000368205 TSKSQ9UJT2 592 aa11.91□□□□□ -0.5
PTPRK-202ENST00000368205 PACS2Q86VP3 889 aa11.9□□□□□ -0.5
PTPRK-202ENST00000368205 PRIM1P49642 420 aaKnown RBP11.89□□□□□ -0.51
PTPRK-202ENST00000368205 GRXCR2A6NFK2 248 aa11.88□□□□□ -0.51
PTPRK-202ENST00000368205 RGS20O76081 388 aa11.88□□□□□ -0.51
PTPRK-202ENST00000368205 ITGBL1O95965 494 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-202ENST00000368205 A0A0G2JS52 829 aa11.87□□□□□ -0.51
PTPRK-202ENST00000368205 PRSS12P56730 875 aa11.86□□□□□ -0.51
PTPRK-202ENST00000368205 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
PTPRK-202ENST00000368205 OSBPP22059 807 aa11.85□□□□□ -0.51
PTPRK-202ENST00000368205 WBP1LQ9NX94 342 aa11.85□□□□□ -0.51
PTPRK-202ENST00000368205 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.85□□□□□ -0.51
PTPRK-202ENST00000368205 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
PTPRK-202ENST00000368205 TSR3Q9UJK0 312 aaKnown RBP11.83□□□□□ -0.52
PTPRK-202ENST00000368205 RBM27Q9P2N5 1060 aaKnown RBP11.82□□□□□ -0.52
PTPRK-202ENST00000368205 FAM198AQ9UFP1 575 aa11.82□□□□□ -0.52
PTPRK-202ENST00000368205 CDHR5Q9HBB8 845 aa11.8□□□□□ -0.52
PTPRK-202ENST00000368205 TSHZ2Q9NRE2 1034 aa11.8□□□□□ -0.52
PTPRK-202ENST00000368205 HPS5Q9UPZ3 1129 aa11.8□□□□□ -0.52
PTPRK-202ENST00000368205 NBPF26B4DH59 902 aa11.79□□□□□ -0.52
PTPRK-202ENST00000368205 ARHGEF1Q92888 912 aaKnown RBP11.79□□□□□ -0.52
PTPRK-202ENST00000368205 TATDN2Q93075 761 aa11.78□□□□□ -0.52
PTPRK-202ENST00000368205 C3orf80F5H4A9 247 aa11.76□□□□□ -0.53
PTPRK-202ENST00000368205 SMAPO00193 183 aa11.76□□□□□ -0.53
PTPRK-202ENST00000368205 PNMA3Q9UL41 463 aa11.75□□□□□ -0.53
PTPRK-202ENST00000368205 KCNC4Q03721 635 aa11.74□□□□□ -0.53
PTPRK-202ENST00000368205 SAMD7Q7Z3H4 446 aa11.74□□□□□ -0.53
PTPRK-202ENST00000368205 TTC13Q8NBP0 860 aa11.74□□□□□ -0.53
PTPRK-202ENST00000368205 NPDC1Q9NQX5 325 aaPredicted RBP11.74□□□□□ -0.53
PTPRK-202ENST00000368205 PPP4CP60510 307 aa11.73□□□□□ -0.53
PTPRK-202ENST00000368205 KCNV2Q8TDN2 545 aa11.73□□□□□ -0.53
PTPRK-202ENST00000368205 NUDT18Q6ZVK8 323 aa11.7□□□□□ -0.54
PTPRK-202ENST00000368205 MLLT3P42568 568 aaPredicted RBP11.68□□□□□ -0.54
PTPRK-202ENST00000368205 PADI6Q6TGC4 694 aa11.68□□□□□ -0.54
PTPRK-202ENST00000368205 HDGFP51858 240 aaKnown RBP11.66□□□□□ -0.54
PTPRK-202ENST00000368205 P3H3Q8IVL6 736 aa11.65□□□□□ -0.54
PTPRK-202ENST00000368205 TJAP1Q5JTD0 557 aa11.64□□□□□ -0.55
PTPRK-202ENST00000368205 IRX2Q9BZI1 471 aaPredicted RBP11.64□□□□□ -0.55
PTPRK-202ENST00000368205 NECTIN2Q92692 538 aa11.62□□□□□ -0.55
PTPRK-202ENST00000368205 EYA1Q99502 592 aa11.61□□□□□ -0.55
PTPRK-202ENST00000368205 PTGDRQ13258 359 aa11.6□□□□□ -0.55
PTPRK-202ENST00000368205 SWT1Q5T5J6 900 aaKnown RBP11.59□□□□□ -0.55
PTPRK-202ENST00000368205 SLF2Q8IX21 1173 aa11.59□□□□□ -0.55
PTPRK-202ENST00000368205 MTRQ99707 1265 aa11.59□□□□□ -0.55
PTPRK-202ENST00000368205 IL21Q9HBE4 155 aa11.59□□□□□ -0.55
PTPRK-202ENST00000368205 RNF40O75150 1001 aa11.58□□□□□ -0.56
PTPRK-202ENST00000368205 APLP1P51693 650 aa11.57□□□□□ -0.56
PTPRK-202ENST00000368205 SLC4A3P48751 1232 aa11.54□□□□□ -0.56
PTPRK-202ENST00000368205 PLCB2Q00722 1185 aa11.53□□□□□ -0.56
PTPRK-202ENST00000368205 DNAJB2P25686 324 aa11.52□□□□□ -0.57
PTPRK-202ENST00000368205 ADGRG1Q9Y653 693 aa11.52□□□□□ -0.57
PTPRK-202ENST00000368205 NUTM2FA1L443 756 aa11.51□□□□□ -0.57
PTPRK-202ENST00000368205 SEMA3EO15041 775 aa11.51□□□□□ -0.57
PTPRK-202ENST00000368205 RBM46Q8TBY0 533 aaKnown RBP11.51□□□□□ -0.57
PTPRK-202ENST00000368205 ZNF516Q92618 1163 aa11.51□□□□□ -0.57
PTPRK-202ENST00000368205 PRR14Q9BWN1 585 aa11.49□□□□□ -0.57
PTPRK-202ENST00000368205 TMEM134Q9H6X4 195 aa11.49□□□□□ -0.57
PTPRK-202ENST00000368205 FCHSD2O94868 740 aa11.48□□□□□ -0.57
PTPRK-202ENST00000368205 PPP1R18Q6NYC8 613 aa11.48□□□□□ -0.57
PTPRK-202ENST00000368205 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
PTPRK-202ENST00000368205 TESPA1A2RU30 521 aaPredicted RBP11.44□□□□□ -0.58
PTPRK-202ENST00000368205 RCCD1A6NED2 376 aa11.44□□□□□ -0.58
PTPRK-202ENST00000368205 COPS2P61201 443 aa11.44□□□□□ -0.58
PTPRK-202ENST00000368205 ZPR1O75312 459 aa11.43□□□□□ -0.58
PTPRK-202ENST00000368205 LAPTM4AQ15012 233 aa11.43□□□□□ -0.58
PTPRK-202ENST00000368205 NKX2-3Q8TAU0 364 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms