RNA–Protein interactions for RNA: ENST00000367324.7

PKP1-203, Transcript of plakophilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP1, Length 5,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-203ENST00000367324 PRKRIP1Q9H875 184 aaPredicted RBP17.21■□□□□ 0.35
PKP1-203ENST00000367324 ZNF330Q9Y3S2 320 aaPredicted RBP17.21■□□□□ 0.35
PKP1-203ENST00000367324 PRDM2Q13029 1718 aa17.2■□□□□ 0.34
PKP1-203ENST00000367324 SPRYD3Q8NCJ5 442 aa17.2■□□□□ 0.34
PKP1-203ENST00000367324 CLUAP1Q96AJ1 413 aa17.19■□□□□ 0.34
PKP1-203ENST00000367324 CGNL1Q0VF96 1302 aa17.19■□□□□ 0.34
PKP1-203ENST00000367324 PLCB2Q00722 1185 aa17.18■□□□□ 0.34
PKP1-203ENST00000367324 LTV1Q96GA3 475 aaPredicted RBP17.18■□□□□ 0.34
PKP1-203ENST00000367324 ERICH3Q5RHP9 1530 aa17.18■□□□□ 0.34
PKP1-203ENST00000367324 KIAA1211Q6ZU35 1233 aa17.18■□□□□ 0.34
PKP1-203ENST00000367324 SYNJ1O43426 1573 aa17.17■□□□□ 0.34
PKP1-203ENST00000367324 NCOA2Q15596 1464 aa17.17■□□□□ 0.34
PKP1-203ENST00000367324 FYCO1Q9BQS8 1478 aa17.17■□□□□ 0.34
PKP1-203ENST00000367324 RRP7AQ9Y3A4 280 aaKnown RBP17.17■□□□□ 0.34
PKP1-203ENST00000367324 GOLGA6L4A6NEF3 574 aa17.16■□□□□ 0.34
PKP1-203ENST00000367324 MINK1Q8N4C8 1332 aaPredicted RBP17.16■□□□□ 0.34
PKP1-203ENST00000367324 DNTTIP2Q5QJE6 756 aaKnown RBP17.15■□□□□ 0.34
PKP1-203ENST00000367324 COG3Q96JB2 828 aa17.15■□□□□ 0.34
PKP1-203ENST00000367324 HMMRO75330 724 aa17.14■□□□□ 0.33
PKP1-203ENST00000367324 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.33
PKP1-203ENST00000367324 ANKRD50Q9ULJ7 1429 aa17.14■□□□□ 0.33
PKP1-203ENST00000367324 NESP48681 1621 aa17.13■□□□□ 0.33
PKP1-203ENST00000367324 FAM69CQ0P6D2 419 aa17.13■□□□□ 0.33
PKP1-203ENST00000367324 HDAC5Q9UQL6 1122 aa17.13■□□□□ 0.33
PKP1-203ENST00000367324 ARAP1Q96P48 1450 aa17.12■□□□□ 0.33
PKP1-203ENST00000367324 CCDC9Q9Y3X0 531 aaKnown RBP17.11■□□□□ 0.33
PKP1-203ENST00000367324 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
PKP1-203ENST00000367324 TULP1O00294 542 aaPredicted RBP17.1■□□□□ 0.33
PKP1-203ENST00000367324 STAC3Q96MF2 364 aa17.09■□□□□ 0.33
PKP1-203ENST00000367324 CHMP3Q9Y3E7 222 aa17.09■□□□□ 0.33
PKP1-203ENST00000367324 E9PSI1 815 aa17.08■□□□□ 0.33
PKP1-203ENST00000367324 MFAP1P55081 439 aaKnown RBP17.08■□□□□ 0.33
PKP1-203ENST00000367324 ZBED9Q6R2W3 1325 aa17.08■□□□□ 0.33
PKP1-203ENST00000367324 GOLGA6L6A8MZA4 724 aa17.08■□□□□ 0.32
PKP1-203ENST00000367324 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
PKP1-203ENST00000367324 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
PKP1-203ENST00000367324 GPATCH3Q96I76 525 aa17.07■□□□□ 0.32
PKP1-203ENST00000367324 PRG4Q92954 1404 aaPredicted RBP17.07■□□□□ 0.32
PKP1-203ENST00000367324 ARHGAP5Q13017 1502 aa17.07■□□□□ 0.32
PKP1-203ENST00000367324 CC2D2AQ9P2K1 1620 aa17.07■□□□□ 0.32
PKP1-203ENST00000367324 IFT140Q96RY7 1462 aa17.06■□□□□ 0.32
PKP1-203ENST00000367324 TRIM6-TRIM34B2RNG4 842 aa17.06■□□□□ 0.32
PKP1-203ENST00000367324 GORABQ5T7V8 394 aa17.06■□□□□ 0.32
PKP1-203ENST00000367324 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
PKP1-203ENST00000367324 TOP2BQ02880 1626 aa17.06■□□□□ 0.32
PKP1-203ENST00000367324 ELL2O00472 640 aaPredicted RBP17.05■□□□□ 0.32
PKP1-203ENST00000367324 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.05■□□□□ 0.32
PKP1-203ENST00000367324 TAF7LQ5H9L4 462 aa17.05■□□□□ 0.32
PKP1-203ENST00000367324 CCDC7Q96M83 1385 aa17.05■□□□□ 0.32
PKP1-203ENST00000367324 BCL2L13Q9BXK5 485 aa17.05■□□□□ 0.32
PKP1-203ENST00000367324 SLKQ9H2G2 1235 aaPredicted RBP17.05■□□□□ 0.32
PKP1-203ENST00000367324 EFCAB5A4FU69 1503 aa17.04■□□□□ 0.32
PKP1-203ENST00000367324 APAF1O14727 1248 aa17.04■□□□□ 0.32
PKP1-203ENST00000367324 KIF7Q2M1P5 1343 aa17.04■□□□□ 0.32
PKP1-203ENST00000367324 PRXQ9BXM0 1461 aa17.04■□□□□ 0.32
PKP1-203ENST00000367324 AFAP1Q8N556 730 aa17.04■□□□□ 0.32
PKP1-203ENST00000367324 GBP4Q96PP9 640 aa17.04■□□□□ 0.32
PKP1-203ENST00000367324 POLA1P09884 1462 aaPredicted RBP17.03■□□□□ 0.32
PKP1-203ENST00000367324 GNL2Q13823 731 aaKnown RBP17.03■□□□□ 0.32
PKP1-203ENST00000367324 DIAPH1O60610 1272 aaKnown RBP17.02■□□□□ 0.32
PKP1-203ENST00000367324 L1TD1Q5T7N2 865 aaKnown RBP17.02■□□□□ 0.32
PKP1-203ENST00000367324 RRBP1Q9P2E9 1410 aaKnown RBP17.02■□□□□ 0.32
PKP1-203ENST00000367324 NRDCO43847 1150 aa17.02■□□□□ 0.32
PKP1-203ENST00000367324 PLIN1O60240 522 aa17.02■□□□□ 0.32
PKP1-203ENST00000367324 RRP1P56182 461 aaKnown RBP17.02■□□□□ 0.32
PKP1-203ENST00000367324 ZKSCAN2Q63HK3 967 aa17.02■□□□□ 0.31
PKP1-203ENST00000367324 ISY1Q9ULR0 285 aaKnown RBP17.02■□□□□ 0.31
PKP1-203ENST00000367324 MIA2Q96PC5 1412 aa17.01■□□□□ 0.31
PKP1-203ENST00000367324 TSHZ2Q9NRE2 1034 aa17.01■□□□□ 0.31
PKP1-203ENST00000367324 C1orf141Q5JVX7 400 aa17.01■□□□□ 0.31
PKP1-203ENST00000367324 CENPQQ7L2Z9 268 aaPredicted RBP16.99■□□□□ 0.31
PKP1-203ENST00000367324 PTMSP20962 102 aa16.99■□□□□ 0.31
PKP1-203ENST00000367324 EHBP1L1Q8N3D4 1523 aa16.98■□□□□ 0.31
PKP1-203ENST00000367324 EXOC6Q8TAG9 804 aa16.98■□□□□ 0.31
PKP1-203ENST00000367324 NAP1L5Q96NT1 182 aaPredicted RBP16.98■□□□□ 0.31
PKP1-203ENST00000367324 NGEFQ8N5V2 710 aa16.98■□□□□ 0.31
PKP1-203ENST00000367324 RTN4Q9NQC3 1192 aaKnown RBP16.98■□□□□ 0.31
PKP1-203ENST00000367324 TEFQ10587 303 aa16.98■□□□□ 0.31
PKP1-203ENST00000367324 IPO9Q96P70 1041 aaKnown RBP16.97■□□□□ 0.31
PKP1-203ENST00000367324 CNTLNQ9NXG0 1405 aa16.97■□□□□ 0.31
PKP1-203ENST00000367324 CRBNQ96SW2 442 aa16.97■□□□□ 0.31
PKP1-203ENST00000367324 SNAPC4Q5SXM2 1469 aa16.96■□□□□ 0.31
PKP1-203ENST00000367324 RIPK4P57078 832 aa16.96■□□□□ 0.3
PKP1-203ENST00000367324 COG6Q9Y2V7 657 aa16.96■□□□□ 0.3
PKP1-203ENST00000367324 TMEM132EQ6IEE7 984 aa16.95■□□□□ 0.3
PKP1-203ENST00000367324 TMX4Q9H1E5 349 aaPredicted RBP16.95■□□□□ 0.3
PKP1-203ENST00000367324 DEKP35659 375 aaKnown RBP16.95■□□□□ 0.3
PKP1-203ENST00000367324 PSME1Q06323 249 aa16.95■□□□□ 0.3
PKP1-203ENST00000367324 RUNDC1Q96C34 613 aa16.94■□□□□ 0.3
PKP1-203ENST00000367324 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
PKP1-203ENST00000367324 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
PKP1-203ENST00000367324 EVA1CP58658 441 aa16.93■□□□□ 0.3
PKP1-203ENST00000367324 TROQ12816 1431 aaPredicted RBP16.93■□□□□ 0.3
PKP1-203ENST00000367324 C9orf84Q5VXU9 1444 aa16.93■□□□□ 0.3
PKP1-203ENST00000367324 ANKRD45Q5TZF3 282 aa16.93■□□□□ 0.3
PKP1-203ENST00000367324 CABP2Q9NPB3 220 aa16.93■□□□□ 0.3
PKP1-203ENST00000367324 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
PKP1-203ENST00000367324 DRC7Q8IY82 874 aa16.93■□□□□ 0.3
PKP1-203ENST00000367324 HSP90B1P14625 803 aaKnown RBP16.92■□□□□ 0.3
PKP1-203ENST00000367324 GZF1Q9H116 711 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms