RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 NBR1Q14596 966 aa16.51■□□□□ 0.23
PTPN7-202ENST00000367279 NUP160Q12769 1436 aa16.51■□□□□ 0.23
PTPN7-202ENST00000367279 ABCC10Q5T3U5 1492 aa16.51■□□□□ 0.23
PTPN7-202ENST00000367279 UHRF1BP1Q6BDS2 1440 aa16.5■□□□□ 0.23
PTPN7-202ENST00000367279 BCL11AQ9H165 835 aa16.49■□□□□ 0.23
PTPN7-202ENST00000367279 KTN1Q86UP2 1357 aaKnown RBP16.49■□□□□ 0.23
PTPN7-202ENST00000367279 NPM2Q86SE8 214 aaKnown RBP16.49■□□□□ 0.23
PTPN7-202ENST00000367279 ABCA8O94911 1581 aa16.48■□□□□ 0.23
PTPN7-202ENST00000367279 EXOC6Q8TAG9 804 aa16.47■□□□□ 0.23
PTPN7-202ENST00000367279 SHANK2Q9UPX8 1470 aa16.47■□□□□ 0.23
PTPN7-202ENST00000367279 BRD4O60885 1362 aaPredicted RBP16.47■□□□□ 0.23
PTPN7-202ENST00000367279 ANP32AP39687 249 aaKnown RBP16.47■□□□□ 0.23
PTPN7-202ENST00000367279 NLRP13Q86W25 1043 aa16.47■□□□□ 0.23
PTPN7-202ENST00000367279 RCAN3Q9UKA8 241 aa16.46■□□□□ 0.23
PTPN7-202ENST00000367279 NOP58Q9Y2X3 529 aaKnown RBP16.46■□□□□ 0.23
PTPN7-202ENST00000367279 CCDC141Q6ZP82 1450 aa16.46■□□□□ 0.23
PTPN7-202ENST00000367279 CDCA7LQ96GN5 454 aa16.45■□□□□ 0.22
PTPN7-202ENST00000367279 ARHGEF12Q9NZN5 1544 aa16.45■□□□□ 0.22
PTPN7-202ENST00000367279 RRP1P56182 461 aaKnown RBP16.44■□□□□ 0.22
PTPN7-202ENST00000367279 PANK3Q9H999 370 aa16.44■□□□□ 0.22
PTPN7-202ENST00000367279 FAM135AQ9P2D6 1515 aa16.44■□□□□ 0.22
PTPN7-202ENST00000367279 MYT1LQ9UL68 1186 aa16.44■□□□□ 0.22
PTPN7-202ENST00000367279 ARHGAP5Q13017 1502 aa16.44■□□□□ 0.22
PTPN7-202ENST00000367279 PAK3O75914 559 aaPredicted RBP16.44■□□□□ 0.22
PTPN7-202ENST00000367279 PLIN1O60240 522 aa16.42■□□□□ 0.22
PTPN7-202ENST00000367279 RSPH4AQ5TD94 716 aa16.42■□□□□ 0.22
PTPN7-202ENST00000367279 RNF123Q5XPI4 1314 aa16.41■□□□□ 0.22
PTPN7-202ENST00000367279 SYCP2Q9BX26 1530 aa16.41■□□□□ 0.22
PTPN7-202ENST00000367279 SAMD9LQ8IVG5 1584 aa16.4■□□□□ 0.22
PTPN7-202ENST00000367279 PRAG1Q86YV5 1406 aa16.4■□□□□ 0.22
PTPN7-202ENST00000367279 TMF1P82094 1093 aa16.4■□□□□ 0.22
PTPN7-202ENST00000367279 LRPPRCP42704 1394 aaKnown RBP16.4■□□□□ 0.22
PTPN7-202ENST00000367279 DISP3Q9P2K9 1392 aa16.39■□□□□ 0.21
PTPN7-202ENST00000367279 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
PTPN7-202ENST00000367279 PLEKHH2Q8IVE3 1493 aa16.38■□□□□ 0.21
PTPN7-202ENST00000367279 KDM5DQ9BY66 1539 aa16.38■□□□□ 0.21
PTPN7-202ENST00000367279 ARHGEF5Q12774 1597 aa16.36■□□□□ 0.21
PTPN7-202ENST00000367279 CDC42BPBQ9Y5S2 1711 aa16.36■□□□□ 0.21
PTPN7-202ENST00000367279 PER1O15534 1290 aaPredicted RBP16.36■□□□□ 0.21
PTPN7-202ENST00000367279 A2MP01023 1474 aa16.35■□□□□ 0.21
PTPN7-202ENST00000367279 IPO9Q96P70 1041 aaKnown RBP16.34■□□□□ 0.21
PTPN7-202ENST00000367279 PARD3Q8TEW0 1356 aa16.34■□□□□ 0.21
PTPN7-202ENST00000367279 TESK2Q96S53 571 aa16.34■□□□□ 0.21
PTPN7-202ENST00000367279 KNSTRNQ9Y448 316 aa16.34■□□□□ 0.21
PTPN7-202ENST00000367279 ERBINQ96RT1 1412 aa16.33■□□□□ 0.2
PTPN7-202ENST00000367279 DEKP35659 375 aaKnown RBP16.33■□□□□ 0.2
PTPN7-202ENST00000367279 SKAP1Q86WV1 359 aa16.33■□□□□ 0.2
PTPN7-202ENST00000367279 PLA2R1Q13018 1463 aa16.32■□□□□ 0.2
PTPN7-202ENST00000367279 PDE3BQ13370 1112 aa16.32■□□□□ 0.2
PTPN7-202ENST00000367279 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
PTPN7-202ENST00000367279 PREX2Q70Z35 1606 aa16.32■□□□□ 0.2
PTPN7-202ENST00000367279 TTC37Q6PGP7 1564 aa16.32■□□□□ 0.2
PTPN7-202ENST00000367279 TRPM1Q7Z4N2 1603 aa16.31■□□□□ 0.2
PTPN7-202ENST00000367279 RTL5Q5HYW3 569 aaPredicted RBP16.31■□□□□ 0.2
PTPN7-202ENST00000367279 EFCAB2Q5VUJ9 269 aa16.3■□□□□ 0.2
PTPN7-202ENST00000367279 CRBNQ96SW2 442 aa16.3■□□□□ 0.2
PTPN7-202ENST00000367279 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
PTPN7-202ENST00000367279 AFAP1Q8N556 730 aa16.29■□□□□ 0.2
PTPN7-202ENST00000367279 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.28■□□□□ 0.2
PTPN7-202ENST00000367279 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
PTPN7-202ENST00000367279 PDE4AP27815 886 aa16.27■□□□□ 0.2
PTPN7-202ENST00000367279 E9PCH4 1651 aa16.27■□□□□ 0.19
PTPN7-202ENST00000367279 TCERG1O14776 1098 aaKnown RBP16.27■□□□□ 0.19
PTPN7-202ENST00000367279 SPAG9O60271 1321 aaKnown RBP16.26■□□□□ 0.19
PTPN7-202ENST00000367279 LAS1LQ9Y4W2 734 aaKnown RBP16.26■□□□□ 0.19
PTPN7-202ENST00000367279 CCDC146Q8IYE0 955 aa16.25■□□□□ 0.19
PTPN7-202ENST00000367279 GPRASP1Q5JY77 1395 aa16.25■□□□□ 0.19
PTPN7-202ENST00000367279 C20orf194Q5TEA3 1177 aa16.24■□□□□ 0.19
PTPN7-202ENST00000367279 ERCC6L2Q5T890 1561 aa16.24■□□□□ 0.19
PTPN7-202ENST00000367279 PPP2R1AP30153 589 aa16.23■□□□□ 0.19
PTPN7-202ENST00000367279 WASHC2CQ9Y4E1 1318 aa16.23■□□□□ 0.19
PTPN7-202ENST00000367279 CHD1O14646 1710 aa16.23■□□□□ 0.19
PTPN7-202ENST00000367279 MYO5CQ9NQX4 1742 aa16.22■□□□□ 0.19
PTPN7-202ENST00000367279 CHGAP10645 457 aaKnown RBP16.21■□□□□ 0.19
PTPN7-202ENST00000367279 UNC13BO14795 1591 aa16.21■□□□□ 0.19
PTPN7-202ENST00000367279 TRAPPC8Q9Y2L5 1435 aa16.21■□□□□ 0.19
PTPN7-202ENST00000367279 PRDM15P57071 1507 aaPredicted RBP16.21■□□□□ 0.19
PTPN7-202ENST00000367279 DUOX2Q9NRD8 1548 aa16.21■□□□□ 0.19
PTPN7-202ENST00000367279 KIF3BO15066 747 aa16.2■□□□□ 0.18
PTPN7-202ENST00000367279 CDCA8Q53HL2 280 aa16.19■□□□□ 0.18
PTPN7-202ENST00000367279 IQGAP3Q86VI3 1631 aa16.18■□□□□ 0.18
PTPN7-202ENST00000367279 EIF2AK4Q9P2K8 1649 aaKnown RBP16.18■□□□□ 0.18
PTPN7-202ENST00000367279 BACH2Q9BYV9 841 aa16.18■□□□□ 0.18
PTPN7-202ENST00000367279 GOLGA2Q08379 1002 aa16.17■□□□□ 0.18
PTPN7-202ENST00000367279 ABCC2Q92887 1545 aa16.17■□□□□ 0.18
PTPN7-202ENST00000367279 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
PTPN7-202ENST00000367279 PLCH2O75038 1416 aa16.17■□□□□ 0.18
PTPN7-202ENST00000367279 CFAP70Q5T0N1 1121 aa16.16■□□□□ 0.18
PTPN7-202ENST00000367279 MAGI2Q86UL8 1455 aa16.16■□□□□ 0.18
PTPN7-202ENST00000367279 BLMP54132 1417 aaPredicted RBP16.16■□□□□ 0.18
PTPN7-202ENST00000367279 TNNT2P45379 298 aaPredicted RBP16.16■□□□□ 0.18
PTPN7-202ENST00000367279 PLEKHH1Q9ULM0 1364 aa16.15■□□□□ 0.18
PTPN7-202ENST00000367279 RGS3P49796 1198 aa16.15■□□□□ 0.18
PTPN7-202ENST00000367279 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
PTPN7-202ENST00000367279 APAF1O14727 1248 aa16.14■□□□□ 0.18
PTPN7-202ENST00000367279 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.18
PTPN7-202ENST00000367279 PLXNC1O60486 1568 aa16.14■□□□□ 0.17
PTPN7-202ENST00000367279 NEFMP07197 916 aa16.13■□□□□ 0.17
PTPN7-202ENST00000367279 MS4A1P11836 297 aa16.13■□□□□ 0.17
PTPN7-202ENST00000367279 KANK1Q14678 1352 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms