RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 CFAP44Q96MT7 982 aa14.47□□□□□ -0.09
RD3-201ENST00000367002 USP35Q9P2H5 1018 aa14.47□□□□□ -0.09
RD3-201ENST00000367002 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
RD3-201ENST00000367002 FAM161AQ3B820 660 aa14.47□□□□□ -0.09
RD3-201ENST00000367002 RAD54L2Q9Y4B4 1467 aa14.47□□□□□ -0.09
RD3-201ENST00000367002 TERF2IPQ9NYB0 399 aa14.47□□□□□ -0.09
RD3-201ENST00000367002 MCCP23508 829 aa14.46□□□□□ -0.09
RD3-201ENST00000367002 COG6Q9Y2V7 657 aa14.45□□□□□ -0.1
RD3-201ENST00000367002 MSNP26038 577 aaKnown RBP14.45□□□□□ -0.1
RD3-201ENST00000367002 GOLGA6L4A6NEF3 574 aa14.44□□□□□ -0.1
RD3-201ENST00000367002 E9PSI1 815 aa14.44□□□□□ -0.1
RD3-201ENST00000367002 WASHC2CQ9Y4E1 1318 aa14.44□□□□□ -0.1
RD3-201ENST00000367002 TAOK2Q9UL54 1235 aa14.43□□□□□ -0.1
RD3-201ENST00000367002 CNTLNQ9NXG0 1405 aa14.43□□□□□ -0.1
RD3-201ENST00000367002 GAPVD1Q14C86 1478 aa14.42□□□□□ -0.1
RD3-201ENST00000367002 CGNL1Q0VF96 1302 aa14.42□□□□□ -0.1
RD3-201ENST00000367002 GOLGA6L3A6NEY3 463 aa14.41□□□□□ -0.1
RD3-201ENST00000367002 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.41□□□□□ -0.1
RD3-201ENST00000367002 NAP1L2Q9ULW6 460 aaPredicted RBP14.41□□□□□ -0.1
RD3-201ENST00000367002 ELL2O00472 640 aaPredicted RBP14.4□□□□□ -0.1
RD3-201ENST00000367002 PTPRGP23470 1445 aa14.4□□□□□ -0.1
RD3-201ENST00000367002 CASKIN1Q8WXD9 1431 aa14.4□□□□□ -0.1
RD3-201ENST00000367002 PRXQ9BXM0 1461 aa14.39□□□□□ -0.11
RD3-201ENST00000367002 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
RD3-201ENST00000367002 FOXD4L1Q9NU39 408 aa14.39□□□□□ -0.11
RD3-201ENST00000367002 NCOA2Q15596 1464 aa14.39□□□□□ -0.11
RD3-201ENST00000367002 NCAPD3P42695 1498 aa14.39□□□□□ -0.11
RD3-201ENST00000367002 KIAA1211Q6ZU35 1233 aa14.38□□□□□ -0.11
RD3-201ENST00000367002 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.38□□□□□ -0.11
RD3-201ENST00000367002 GSE1Q14687 1217 aa14.38□□□□□ -0.11
RD3-201ENST00000367002 NBPF8Q3BBV2 869 aa14.37□□□□□ -0.11
RD3-201ENST00000367002 ZKSCAN2Q63HK3 967 aa14.37□□□□□ -0.11
RD3-201ENST00000367002 SLC4A10Q6U841 1118 aa14.37□□□□□ -0.11
RD3-201ENST00000367002 STK31Q9BXU1 1019 aa14.37□□□□□ -0.11
RD3-201ENST00000367002 ERICH3Q5RHP9 1530 aa14.37□□□□□ -0.11
RD3-201ENST00000367002 PTMSP20962 102 aa14.36□□□□□ -0.11
RD3-201ENST00000367002 CDCA7LQ96GN5 454 aa14.36□□□□□ -0.11
RD3-201ENST00000367002 ANKRD50Q9ULJ7 1429 aa14.36□□□□□ -0.11
RD3-201ENST00000367002 CCDC184Q52MB2 194 aa14.35□□□□□ -0.11
RD3-201ENST00000367002 HMMRO75330 724 aa14.35□□□□□ -0.11
RD3-201ENST00000367002 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
RD3-201ENST00000367002 ADAMTS8Q9UP79 889 aa14.34□□□□□ -0.11
RD3-201ENST00000367002 NGEFQ8N5V2 710 aa14.34□□□□□ -0.11
RD3-201ENST00000367002 ANKRD45Q5TZF3 282 aa14.33□□□□□ -0.12
RD3-201ENST00000367002 CUX1P39880 1505 aa14.33□□□□□ -0.12
RD3-201ENST00000367002 NUTM2FA1L443 756 aa14.33□□□□□ -0.12
RD3-201ENST00000367002 TRIM6-TRIM34B2RNG4 842 aa14.33□□□□□ -0.12
RD3-201ENST00000367002 LMOD3Q0VAK6 560 aa14.33□□□□□ -0.12
RD3-201ENST00000367002 VGFO15240 615 aaPredicted RBP14.32□□□□□ -0.12
RD3-201ENST00000367002 BRD4O60885 1362 aaPredicted RBP14.32□□□□□ -0.12
RD3-201ENST00000367002 CHAF1AQ13111 956 aaPredicted RBP14.32□□□□□ -0.12
RD3-201ENST00000367002 CFTRP13569 1480 aa14.32□□□□□ -0.12
RD3-201ENST00000367002 FYCO1Q9BQS8 1478 aa14.31□□□□□ -0.12
RD3-201ENST00000367002 NRDCO43847 1150 aa14.31□□□□□ -0.12
RD3-201ENST00000367002 EVC2Q86UK5 1308 aa14.31□□□□□ -0.12
RD3-201ENST00000367002 NOL8Q76FK4 1167 aaKnown RBP14.3□□□□□ -0.12
RD3-201ENST00000367002 PNISRQ8TF01 805 aaKnown RBP14.3□□□□□ -0.12
RD3-201ENST00000367002 CDK11BP21127 795 aaKnown RBP14.29□□□□□ -0.12
RD3-201ENST00000367002 DRC7Q8IY82 874 aa14.29□□□□□ -0.12
RD3-201ENST00000367002 NBPF1Q3BBV0 1214 aa14.29□□□□□ -0.12
RD3-201ENST00000367002 MIA2Q96PC5 1412 aa14.29□□□□□ -0.12
RD3-201ENST00000367002 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
RD3-201ENST00000367002 GOLGA6L6A8MZA4 724 aa14.29□□□□□ -0.12
RD3-201ENST00000367002 DZIP1LQ8IYY4 767 aaKnown RBP14.29□□□□□ -0.12
RD3-201ENST00000367002 MINK1Q8N4C8 1332 aaPredicted RBP14.28□□□□□ -0.12
RD3-201ENST00000367002 KIAA2012Q0VF49 1180 aa14.28□□□□□ -0.12
RD3-201ENST00000367002 HFM1A2PYH4 1435 aa14.28□□□□□ -0.12
RD3-201ENST00000367002 SYAP1Q96A49 352 aaPredicted RBP14.28□□□□□ -0.12
RD3-201ENST00000367002 DDX19BQ9UMR2 479 aa14.28□□□□□ -0.12
RD3-201ENST00000367002 ST18O60284 1047 aa14.27□□□□□ -0.12
RD3-201ENST00000367002 NGDNQ8NEJ9 315 aaKnown RBP14.27□□□□□ -0.12
RD3-201ENST00000367002 PANK1Q8TE04 598 aa14.27□□□□□ -0.12
RD3-201ENST00000367002 DDX11L8A8MPP1 907 aa14.27□□□□□ -0.13
RD3-201ENST00000367002 RUNDC1Q96C34 613 aa14.27□□□□□ -0.13
RD3-201ENST00000367002 CHMP4AQ9BY43 222 aa14.27□□□□□ -0.13
RD3-201ENST00000367002 AMPHP49418 695 aa14.26□□□□□ -0.13
RD3-201ENST00000367002 STAC3Q96MF2 364 aa14.26□□□□□ -0.13
RD3-201ENST00000367002 DDX49Q9Y6V7 483 aaKnown RBP14.26□□□□□ -0.13
RD3-201ENST00000367002 AKNAQ7Z591 1439 aa14.26□□□□□ -0.13
RD3-201ENST00000367002 RIPK4P57078 832 aa14.26□□□□□ -0.13
RD3-201ENST00000367002 FOXD4L5Q5VV16 416 aaPredicted RBP14.26□□□□□ -0.13
RD3-201ENST00000367002 FOXD4L4Q8WXT5 416 aaPredicted RBP14.26□□□□□ -0.13
RD3-201ENST00000367002 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
RD3-201ENST00000367002 NFKBIBQ15653 356 aa14.25□□□□□ -0.13
RD3-201ENST00000367002 NESP48681 1621 aa14.25□□□□□ -0.13
RD3-201ENST00000367002 LTV1Q96GA3 475 aaPredicted RBP14.25□□□□□ -0.13
RD3-201ENST00000367002 DIAPH1O60610 1272 aaKnown RBP14.24□□□□□ -0.13
RD3-201ENST00000367002 ARID3AQ99856 593 aa14.23□□□□□ -0.13
RD3-201ENST00000367002 COG3Q96JB2 828 aa14.22□□□□□ -0.13
RD3-201ENST00000367002 PPP2R1AP30153 589 aa14.22□□□□□ -0.13
RD3-201ENST00000367002 CFAP70Q5T0N1 1121 aa14.22□□□□□ -0.13
RD3-201ENST00000367002 LNPKQ9C0E8 428 aa14.22□□□□□ -0.13
RD3-201ENST00000367002 CHMP5Q9NZZ3 219 aa14.22□□□□□ -0.13
RD3-201ENST00000367002 TCP11L2Q8N4U5 519 aa14.21□□□□□ -0.13
RD3-201ENST00000367002 AFAP1Q8N556 730 aa14.21□□□□□ -0.13
RD3-201ENST00000367002 MTHFSP49914 203 aa14.21□□□□□ -0.13
RD3-201ENST00000367002 HDAC5Q9UQL6 1122 aa14.21□□□□□ -0.13
RD3-201ENST00000367002 TMEM132EQ6IEE7 984 aa14.21□□□□□ -0.13
RD3-201ENST00000367002 RILPL2Q969X0 211 aa14.21□□□□□ -0.14
RD3-201ENST00000367002 GGNBP2Q9H3C7 697 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms