RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 TRIM6-TRIM34B2RNG4 842 aa19.41■□□□□ 0.7
FBXO28-201ENST00000366862 HDGFL2Q7Z4V5 671 aaPredicted RBP19.41■□□□□ 0.7
FBXO28-201ENST00000366862 NOC3LQ8WTT2 800 aaKnown RBP19.41■□□□□ 0.7
FBXO28-201ENST00000366862 PRKCSHP14314 528 aaPredicted RBP19.41■□□□□ 0.7
FBXO28-201ENST00000366862 GPATCH3Q96I76 525 aa19.4■□□□□ 0.7
FBXO28-201ENST00000366862 NUP155O75694 1391 aa19.4■□□□□ 0.7
FBXO28-201ENST00000366862 ANKRD30AQ9BXX3 1397 aa19.4■□□□□ 0.7
FBXO28-201ENST00000366862 TEX35Q5T0J7 233 aa19.4■□□□□ 0.7
FBXO28-201ENST00000366862 CHMP4AQ9BY43 222 aa19.39■□□□□ 0.7
FBXO28-201ENST00000366862 IL27Q8NEV9 243 aa19.38■□□□□ 0.69
FBXO28-201ENST00000366862 KIF3AQ9Y496 699 aa19.38■□□□□ 0.69
FBXO28-201ENST00000366862 NGEFQ8N5V2 710 aa19.37■□□□□ 0.69
FBXO28-201ENST00000366862 BRPF3Q9ULD4 1205 aa19.37■□□□□ 0.69
FBXO28-201ENST00000366862 GOLGA6L19H0YKK7 550 aa19.37■□□□□ 0.69
FBXO28-201ENST00000366862 ZKSCAN2Q63HK3 967 aa19.37■□□□□ 0.69
FBXO28-201ENST00000366862 NOL8Q76FK4 1167 aaKnown RBP19.36■□□□□ 0.69
FBXO28-201ENST00000366862 TPM3P06753 285 aa19.36■□□□□ 0.69
FBXO28-201ENST00000366862 FOXD4L5Q5VV16 416 aaPredicted RBP19.36■□□□□ 0.69
FBXO28-201ENST00000366862 FOXD4L4Q8WXT5 416 aaPredicted RBP19.36■□□□□ 0.69
FBXO28-201ENST00000366862 HDAC5Q9UQL6 1122 aa19.36■□□□□ 0.69
FBXO28-201ENST00000366862 A0A0G2JS52 829 aa19.35■□□□□ 0.69
FBXO28-201ENST00000366862 TULP1O00294 542 aaPredicted RBP19.35■□□□□ 0.69
FBXO28-201ENST00000366862 NUCB2P80303 420 aa19.35■□□□□ 0.69
FBXO28-201ENST00000366862 AAMPQ13685 434 aa19.35■□□□□ 0.69
FBXO28-201ENST00000366862 HSP90B1P14625 803 aaKnown RBP19.35■□□□□ 0.69
FBXO28-201ENST00000366862 STK31Q9BXU1 1019 aa19.34■□□□□ 0.69
FBXO28-201ENST00000366862 CCDC39Q9UFE4 941 aa19.34■□□□□ 0.69
FBXO28-201ENST00000366862 EIF4G1Q04637 1599 aaKnown RBP19.34■□□□□ 0.69
FBXO28-201ENST00000366862 PLEKHG5O94827 1062 aa19.33■□□□□ 0.69
FBXO28-201ENST00000366862 LMOD3Q0VAK6 560 aa19.33■□□□□ 0.68
FBXO28-201ENST00000366862 DIAPH3Q9NSV4 1193 aa19.32■□□□□ 0.68
FBXO28-201ENST00000366862 A0A0U1RQG5 324 aaPredicted RBP19.32■□□□□ 0.68
FBXO28-201ENST00000366862 COG6Q9Y2V7 657 aa19.32■□□□□ 0.68
FBXO28-201ENST00000366862 R3HCC1Q9Y3T6 440 aaKnown RBP19.32■□□□□ 0.68
FBXO28-201ENST00000366862 BECN2A8MW95 431 aa19.32■□□□□ 0.68
FBXO28-201ENST00000366862 ANKRD45Q5TZF3 282 aa19.32■□□□□ 0.68
FBXO28-201ENST00000366862 NASPP49321 788 aaPredicted RBP19.31■□□□□ 0.68
FBXO28-201ENST00000366862 REC8O95072 547 aa19.3■□□□□ 0.68
FBXO28-201ENST00000366862 CNTLNQ9NXG0 1405 aa19.3■□□□□ 0.68
FBXO28-201ENST00000366862 CHMP4CQ96CF2 233 aa19.29■□□□□ 0.68
FBXO28-201ENST00000366862 ST20-MTHFSA0A0A6YYL1 179 aa19.29■□□□□ 0.68
FBXO28-201ENST00000366862 DDX19BQ9UMR2 479 aa19.29■□□□□ 0.68
FBXO28-201ENST00000366862 PANK3Q9H999 370 aa19.29■□□□□ 0.68
FBXO28-201ENST00000366862 ISY1Q9ULR0 285 aaKnown RBP19.28■□□□□ 0.68
FBXO28-201ENST00000366862 ZNF592Q92610 1267 aa19.28■□□□□ 0.68
FBXO28-201ENST00000366862 USP47Q96K76 1375 aa19.28■□□□□ 0.68
FBXO28-201ENST00000366862 SPAG9O60271 1321 aaKnown RBP19.28■□□□□ 0.68
FBXO28-201ENST00000366862 MROH2BQ7Z745 1585 aa19.28■□□□□ 0.68
FBXO28-201ENST00000366862 C22orf23Q9BZE7 217 aa19.28■□□□□ 0.68
FBXO28-201ENST00000366862 RRP9O43818 475 aaKnown RBP19.27■□□□□ 0.68
FBXO28-201ENST00000366862 TRAK2O60296 914 aa19.27■□□□□ 0.68
FBXO28-201ENST00000366862 SF3A1Q15459 793 aaKnown RBP19.27■□□□□ 0.68
FBXO28-201ENST00000366862 PAK3O75914 559 aaPredicted RBP19.27■□□□□ 0.67
FBXO28-201ENST00000366862 NOM1Q5C9Z4 860 aaKnown RBP19.26■□□□□ 0.67
FBXO28-201ENST00000366862 CCDC173Q0VFZ6 552 aa19.26■□□□□ 0.67
FBXO28-201ENST00000366862 CCDC66A2RUB6 948 aa19.26■□□□□ 0.67
FBXO28-201ENST00000366862 ARGLU1Q9NWB6 273 aaPredicted RBP19.25■□□□□ 0.67
FBXO28-201ENST00000366862 CCDC7Q96M83 1385 aa19.25■□□□□ 0.67
FBXO28-201ENST00000366862 CCDC18Q5T9S5 1454 aa19.25■□□□□ 0.67
FBXO28-201ENST00000366862 FRAT2O75474 233 aaPredicted RBP19.24■□□□□ 0.67
FBXO28-201ENST00000366862 H3BQV1 296 aa19.24■□□□□ 0.67
FBXO28-201ENST00000366862 IFFO2Q5TF58 517 aa19.24■□□□□ 0.67
FBXO28-201ENST00000366862 HMGN5P82970 282 aaKnown RBP19.23■□□□□ 0.67
FBXO28-201ENST00000366862 SAFB2Q14151 953 aaKnown RBP eCLIP19.23■□□□□ 0.679e-6■■■□□ 17.7
FBXO28-201ENST00000366862 CCDC70Q6NSX1 233 aa19.23■□□□□ 0.67
FBXO28-201ENST00000366862 TERF2IPQ9NYB0 399 aa19.23■□□□□ 0.67
FBXO28-201ENST00000366862 MCTP1Q6DN14 999 aa19.23■□□□□ 0.67
FBXO28-201ENST00000366862 CCAR2Q8N163 923 aaKnown RBP19.23■□□□□ 0.67
FBXO28-201ENST00000366862 RAPGEF2Q9Y4G8 1499 aa19.23■□□□□ 0.67
FBXO28-201ENST00000366862 HDGFP51858 240 aaKnown RBP19.22■□□□□ 0.67
FBXO28-201ENST00000366862 SLC4A10Q6U841 1118 aa19.21■□□□□ 0.67
FBXO28-201ENST00000366862 BCL2L13Q9BXK5 485 aa19.21■□□□□ 0.67
FBXO28-201ENST00000366862 DZIP1LQ8IYY4 767 aaKnown RBP19.2■□□□□ 0.66
FBXO28-201ENST00000366862 TPM1P09493 284 aa19.2■□□□□ 0.66
FBXO28-201ENST00000366862 RRP7AQ9Y3A4 280 aaKnown RBP19.2■□□□□ 0.66
FBXO28-201ENST00000366862 BACH2Q9BYV9 841 aa19.19■□□□□ 0.66
FBXO28-201ENST00000366862 FAM184AQ8NB25 1140 aa19.19■□□□□ 0.66
FBXO28-201ENST00000366862 RILPL2Q969X0 211 aa19.19■□□□□ 0.66
FBXO28-201ENST00000366862 FOXD4L6Q3SYB3 417 aaPredicted RBP19.18■□□□□ 0.66
FBXO28-201ENST00000366862 FOXD4L3Q6VB84 417 aaPredicted RBP19.18■□□□□ 0.66
FBXO28-201ENST00000366862 TSR1Q2NL82 804 aaKnown RBP19.18■□□□□ 0.66
FBXO28-201ENST00000366862 APAF1O14727 1248 aa19.18■□□□□ 0.66
FBXO28-201ENST00000366862 IFT57Q9NWB7 429 aa19.17■□□□□ 0.66
FBXO28-201ENST00000366862 BRD4O60885 1362 aaPredicted RBP19.17■□□□□ 0.66
FBXO28-201ENST00000366862 HOMER1Q86YM7 354 aa19.17■□□□□ 0.66
FBXO28-201ENST00000366862 CWC15Q9P013 229 aaKnown RBP19.17■□□□□ 0.66
FBXO28-201ENST00000366862 INTS3Q68E01 1043 aaKnown RBP19.17■□□□□ 0.66
FBXO28-201ENST00000366862 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
FBXO28-201ENST00000366862 ACBD3Q9H3P7 528 aa19.16■□□□□ 0.66
FBXO28-201ENST00000366862 KIF7Q2M1P5 1343 aa19.16■□□□□ 0.66
FBXO28-201ENST00000366862 SOX12O15370 315 aa19.15■□□□□ 0.66
FBXO28-201ENST00000366862 LETM1O95202 739 aaPredicted RBP19.15■□□□□ 0.66
FBXO28-201ENST00000366862 MBD3O95983 291 aa19.15■□□□□ 0.66
FBXO28-201ENST00000366862 STK26Q9P289 416 aa19.15■□□□□ 0.66
FBXO28-201ENST00000366862 LMOD2Q6P5Q4 547 aa19.14■□□□□ 0.65
FBXO28-201ENST00000366862 PODXL2Q9NZ53 605 aa19.14■□□□□ 0.65
FBXO28-201ENST00000366862 RSPH4AQ5TD94 716 aa19.14■□□□□ 0.65
FBXO28-201ENST00000366862 RUFY2Q8WXA3 655 aa19.14■□□□□ 0.65
FBXO28-201ENST00000366862 MNS1Q8NEH6 495 aa19.14■□□□□ 0.65
FBXO28-201ENST00000366862 FHOD3Q2V2M9 1422 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms