RNA–Protein interactions for RNA: ENST00000366527.4

HNRNPU-203, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 12,852 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-203ENST00000366527 SYNE3Q6ZMZ3 975 aa4.85□□□□□ -1.63
HNRNPU-203ENST00000366527 GGT6Q6P531 493 aa4.84□□□□□ -1.63
HNRNPU-203ENST00000366527 VTI1AQ96AJ9 217 aa4.84□□□□□ -1.63
HNRNPU-203ENST00000366527 HTATSF1O43719 755 aaKnown RBP4.84□□□□□ -1.63
HNRNPU-203ENST00000366527 C1orf141Q5JVX7 400 aa4.84□□□□□ -1.63
HNRNPU-203ENST00000366527 CCDC47Q96A33 483 aaKnown RBP4.84□□□□□ -1.63
HNRNPU-203ENST00000366527 CHMP4BP1P59074 171 aa4.84□□□□□ -1.63
HNRNPU-203ENST00000366527 SPAG9O60271 1321 aaKnown RBP4.84□□□□□ -1.63
HNRNPU-203ENST00000366527 HDAC5Q9UQL6 1122 aa4.84□□□□□ -1.64
HNRNPU-203ENST00000366527 PODXL2Q9NZ53 605 aa4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 RBM5P52756 815 aaKnown RBP eCLIP4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 FOXD4L1Q9NU39 408 aa4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 BIN2Q9UBW5 565 aaPredicted RBP4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 EP400NLQ6ZTU2 488 aa4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 NGDNQ8NEJ9 315 aaKnown RBP4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 KANK1Q14678 1352 aa4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 TPM3P06753 285 aa4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 STK26Q9P289 416 aa4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 KNSTRNQ9Y448 316 aa4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 CALRP27797 417 aaKnown RBP4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 CCDC112Q8NEF3 446 aa4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 PCMTD1Q96MG8 357 aaPredicted RBP4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 SUPT16HQ9Y5B9 1047 aaKnown RBP4.83□□□□□ -1.64
HNRNPU-203ENST00000366527 HSP90AB1P08238 724 aaKnown RBP4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 ARID3AQ99856 593 aa4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 ZBTB24O43167 697 aaPredicted RBP4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 NOC2LQ9Y3T9 749 aaKnown RBP4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 HMGN5P82970 282 aaKnown RBP4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 CCDC136Q96JN2 1154 aa4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 MATR3P43243 847 aaKnown RBP eCLIP4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 CCDC27Q2M243 656 aa4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 HSP90AB4PQ58FF6 505 aa4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 LTV1Q96GA3 475 aaPredicted RBP4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 TONSLQ96HA7 1378 aa4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 ERICH2A1L162 156 aa4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 WDR78Q5VTH9 848 aa4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 NGEFQ8N5V2 710 aa4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 HSP90AB2PQ58FF8 381 aa4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 CPLX3Q8WVH0 158 aa4.82□□□□□ -1.64
HNRNPU-203ENST00000366527 STK25O00506 426 aa4.81□□□□□ -1.64
HNRNPU-203ENST00000366527 ZRSR2Q15696 482 aaKnown RBP4.81□□□□□ -1.64
HNRNPU-203ENST00000366527 AMPHP49418 695 aa4.81□□□□□ -1.64
HNRNPU-203ENST00000366527 PSME1Q06323 249 aa4.81□□□□□ -1.64
HNRNPU-203ENST00000366527 HDGFL2Q7Z4V5 671 aaPredicted RBP4.81□□□□□ -1.64
HNRNPU-203ENST00000366527 MS4A1P11836 297 aa4.81□□□□□ -1.64
HNRNPU-203ENST00000366527 SAFB2Q14151 953 aaKnown RBP eCLIP4.81□□□□□ -1.64
HNRNPU-203ENST00000366527 RGS22Q8NE09 1264 aa4.81□□□□□ -1.64
HNRNPU-203ENST00000366527 PDE3BQ13370 1112 aa4.8□□□□□ -1.64
HNRNPU-203ENST00000366527 HOMER1Q86YM7 354 aa4.8□□□□□ -1.64
HNRNPU-203ENST00000366527 TTC5Q8N0Z6 440 aa4.8□□□□□ -1.64
HNRNPU-203ENST00000366527 PABPN1LA6NDY0 278 aaKnown RBP4.8□□□□□ -1.64
HNRNPU-203ENST00000366527 SF3A1Q15459 793 aaKnown RBP4.8□□□□□ -1.64
HNRNPU-203ENST00000366527 CIZ1Q9ULV3 898 aaPredicted RBP4.8□□□□□ -1.64
HNRNPU-203ENST00000366527 LRRFIP1Q32MZ4 808 aaKnown RBP4.8□□□□□ -1.64
HNRNPU-203ENST00000366527 ZSCAN29Q8IWY8 852 aaPredicted RBP4.8□□□□□ -1.64
HNRNPU-203ENST00000366527 FYB1O15117 783 aa4.79□□□□□ -1.64
HNRNPU-203ENST00000366527 NUTM2FA1L443 756 aa4.79□□□□□ -1.64
HNRNPU-203ENST00000366527 XPCQ01831 940 aaPredicted RBP4.79□□□□□ -1.64
HNRNPU-203ENST00000366527 APPP05067 770 aa4.79□□□□□ -1.64
HNRNPU-203ENST00000366527 SCLT1Q96NL6 688 aa4.79□□□□□ -1.64
HNRNPU-203ENST00000366527 SYCP1Q15431 976 aa4.79□□□□□ -1.64
HNRNPU-203ENST00000366527 RWDD1Q9H446 243 aaPredicted RBP4.79□□□□□ -1.64
HNRNPU-203ENST00000366527 NOL8Q76FK4 1167 aaKnown RBP4.79□□□□□ -1.64
HNRNPU-203ENST00000366527 TTC16Q8NEE8 873 aa4.79□□□□□ -1.64
HNRNPU-203ENST00000366527 FRAT1Q92837 279 aaPredicted RBP4.79□□□□□ -1.64
HNRNPU-203ENST00000366527 STK31Q9BXU1 1019 aa4.79□□□□□ -1.64
HNRNPU-203ENST00000366527 CALD1Q05682 793 aaKnown RBP4.78□□□□□ -1.64
HNRNPU-203ENST00000366527 CCDC70Q6NSX1 233 aa4.78□□□□□ -1.64
HNRNPU-203ENST00000366527 SETQ01105 290 aaPredicted RBP4.78□□□□□ -1.64
HNRNPU-203ENST00000366527 STK24Q9Y6E0 443 aa4.78□□□□□ -1.64
HNRNPU-203ENST00000366527 TRIM6-TRIM34B2RNG4 842 aa4.78□□□□□ -1.64
HNRNPU-203ENST00000366527 ANKRD18AQ8IVF6 992 aa4.78□□□□□ -1.64
HNRNPU-203ENST00000366527 SLKQ9H2G2 1235 aaPredicted RBP4.78□□□□□ -1.64
HNRNPU-203ENST00000366527 TPM1P09493 284 aa4.78□□□□□ -1.64
HNRNPU-203ENST00000366527 GSE1Q14687 1217 aa4.78□□□□□ -1.64
HNRNPU-203ENST00000366527 AIDAQ96BJ3 306 aa4.78□□□□□ -1.64
HNRNPU-203ENST00000366527 PSMD1Q99460 953 aa4.78□□□□□ -1.64
HNRNPU-203ENST00000366527 HMMRO75330 724 aa4.77□□□□□ -1.65
HNRNPU-203ENST00000366527 ATP2B2Q01814 1243 aa4.77□□□□□ -1.65
HNRNPU-203ENST00000366527 TRIM29Q14134 588 aa4.77□□□□□ -1.65
HNRNPU-203ENST00000366527 COMMD10Q9Y6G5 202 aa4.77□□□□□ -1.65
HNRNPU-203ENST00000366527 MRPS9P82933 396 aaKnown RBP4.77□□□□□ -1.65
HNRNPU-203ENST00000366527 HNRNPUQ00839 825 aaKnown RBP eCLIP4.77□□□□□ -1.65
HNRNPU-203ENST00000366527 PDILTQ8N807 584 aa4.77□□□□□ -1.65
HNRNPU-203ENST00000366527 MTMR7Q9Y216 660 aa4.77□□□□□ -1.65
HNRNPU-203ENST00000366527 NAP1L1P55209 391 aaKnown RBP4.77□□□□□ -1.65
HNRNPU-203ENST00000366527 CCAR2Q8N163 923 aaKnown RBP4.77□□□□□ -1.65
HNRNPU-203ENST00000366527 MPHOSPH6Q99547 160 aaKnown RBP4.77□□□□□ -1.65
HNRNPU-203ENST00000366527 EIF4E1BA6NMX2 242 aaKnown RBP4.76□□□□□ -1.65
HNRNPU-203ENST00000366527 KMT5BQ4FZB7 885 aa4.76□□□□□ -1.65
HNRNPU-203ENST00000366527 FAM184AQ8NB25 1140 aa4.76□□□□□ -1.65
HNRNPU-203ENST00000366527 GOLGA6L3A6NEY3 463 aa4.76□□□□□ -1.65
HNRNPU-203ENST00000366527 SSX2IPQ9Y2D8 614 aa4.76□□□□□ -1.65
HNRNPU-203ENST00000366527 ERC1Q8IUD2 1116 aa4.76□□□□□ -1.65
HNRNPU-203ENST00000366527 STRN4Q9NRL3 753 aa4.76□□□□□ -1.65
HNRNPU-203ENST00000366527 LPXNO60711 386 aa4.76□□□□□ -1.65
HNRNPU-203ENST00000366527 TRDNQ13061 729 aa4.76□□□□□ -1.65
HNRNPU-203ENST00000366527 SEPT7Q16181 437 aaKnown RBP4.76□□□□□ -1.65
HNRNPU-203ENST00000366527 PDE4AP27815 886 aa4.76□□□□□ -1.65
HNRNPU-203ENST00000366527 PRC1O43663 620 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms