RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 ONECUT3O60422 494 aaPredicted RBP5.05□□□□□ -1.6
RNU4-41P-201ENST00000364426 E2F4Q16254 413 aa5.04□□□□□ -1.6
RNU4-41P-201ENST00000364426 KCTD12Q96CX2 325 aaKnown RBP5.04□□□□□ -1.6
RNU4-41P-201ENST00000364426 CFAP44Q96MT7 982 aa5.04□□□□□ -1.6
RNU4-41P-201ENST00000364426 NBPF3Q9H094 633 aa5.04□□□□□ -1.6
RNU4-41P-201ENST00000364426 COL9A1P20849 921 aa5.03□□□□□ -1.6
RNU4-41P-201ENST00000364426 C6orf132Q5T0Z8 1188 aa5.03□□□□□ -1.6
RNU4-41P-201ENST00000364426 RABGEF1Q9UJ41 708 aa5.03□□□□□ -1.6
RNU4-41P-201ENST00000364426 THSD4Q6ZMP0 1018 aa5.02□□□□□ -1.61
RNU4-41P-201ENST00000364426 MRPL50Q8N5N7 158 aaKnown RBP5.02□□□□□ -1.61
RNU4-41P-201ENST00000364426 EN1Q05925 392 aaPredicted RBP5.01□□□□□ -1.61
RNU4-41P-201ENST00000364426 PROX2Q3B8N5 592 aa5.01□□□□□ -1.61
RNU4-41P-201ENST00000364426 LAPTM4BQ86VI4 370 aa5.01□□□□□ -1.61
RNU4-41P-201ENST00000364426 DDX12PQ92771 950 aa5.01□□□□□ -1.61
RNU4-41P-201ENST00000364426 WDR70Q9NW82 654 aa5.01□□□□□ -1.61
RNU4-41P-201ENST00000364426 PLA2G2EQ9NZK7 142 aa5.01□□□□□ -1.61
RNU4-41P-201ENST00000364426 IFFO2Q5TF58 517 aa5□□□□□ -1.61
RNU4-41P-201ENST00000364426 WNT2BQ93097 391 aa5□□□□□ -1.61
RNU4-41P-201ENST00000364426 GOLGA8CPA6NN73 597 aa4.99□□□□□ -1.61
RNU4-41P-201ENST00000364426 TRIM6-TRIM34B2RNG4 842 aa4.99□□□□□ -1.61
RNU4-41P-201ENST00000364426 NBR1Q14596 966 aa4.99□□□□□ -1.61
RNU4-41P-201ENST00000364426 KIAA1468Q9P260 1216 aa4.98□□□□□ -1.61
RNU4-41P-201ENST00000364426 MAP3K7O43318 606 aa4.97□□□□□ -1.61
RNU4-41P-201ENST00000364426 PTPN5P54829 565 aa4.97□□□□□ -1.61
RNU4-41P-201ENST00000364426 ANKK1Q8NFD2 765 aa4.97□□□□□ -1.61
RNU4-41P-201ENST00000364426 CERKQ8TCT0 537 aa4.97□□□□□ -1.61
RNU4-41P-201ENST00000364426 RBM33Q96EV2 1170 aaKnown RBP4.97□□□□□ -1.61
RNU4-41P-201ENST00000364426 SOWAHBA6NEL2 793 aa4.96□□□□□ -1.62
RNU4-41P-201ENST00000364426 FAM98CQ17RN3 349 aaKnown RBP4.96□□□□□ -1.62
RNU4-41P-201ENST00000364426 TSR1Q2NL82 804 aaKnown RBP4.96□□□□□ -1.62
RNU4-41P-201ENST00000364426 OSBPP22059 807 aa4.95□□□□□ -1.62
RNU4-41P-201ENST00000364426 PRIM1P49642 420 aaKnown RBP4.95□□□□□ -1.62
RNU4-41P-201ENST00000364426 NYAP1Q6ZVC0 841 aa4.95□□□□□ -1.62
RNU4-41P-201ENST00000364426 ARHGEF1Q92888 912 aaKnown RBP4.95□□□□□ -1.62
RNU4-41P-201ENST00000364426 ZFRQ96KR1 1074 aaKnown RBP4.95□□□□□ -1.62
RNU4-41P-201ENST00000364426 TSHZ2Q9NRE2 1034 aa4.95□□□□□ -1.62
RNU4-41P-201ENST00000364426 RBM27Q9P2N5 1060 aaKnown RBP4.95□□□□□ -1.62
RNU4-41P-201ENST00000364426 TSKSQ9UJT2 592 aa4.95□□□□□ -1.62
RNU4-41P-201ENST00000364426 PACS2Q86VP3 889 aa4.94□□□□□ -1.62
RNU4-41P-201ENST00000364426 GRXCR2A6NFK2 248 aa4.93□□□□□ -1.62
RNU4-41P-201ENST00000364426 ITGBL1O95965 494 aaPredicted RBP4.93□□□□□ -1.62
RNU4-41P-201ENST00000364426 PRSS12P56730 875 aa4.93□□□□□ -1.62
RNU4-41P-201ENST00000364426 CDCA7LQ96GN5 454 aa4.93□□□□□ -1.62
RNU4-41P-201ENST00000364426 SEPT9Q9UHD8 586 aaPredicted RBP4.93□□□□□ -1.62
RNU4-41P-201ENST00000364426 RGS20O76081 388 aa4.92□□□□□ -1.62
RNU4-41P-201ENST00000364426 BCAMP50895 628 aa4.92□□□□□ -1.62
RNU4-41P-201ENST00000364426 TTC13Q8NBP0 860 aa4.92□□□□□ -1.62
RNU4-41P-201ENST00000364426 FAM198AQ9UFP1 575 aa4.92□□□□□ -1.62
RNU4-41P-201ENST00000364426 A0A0G2JS52 829 aa4.91□□□□□ -1.62
RNU4-41P-201ENST00000364426 KCNV2Q8TDN2 545 aa4.91□□□□□ -1.62
RNU4-41P-201ENST00000364426 LRCH3Q96II8 777 aa4.91□□□□□ -1.62
RNU4-41P-201ENST00000364426 NPDC1Q9NQX5 325 aaPredicted RBP4.91□□□□□ -1.62
RNU4-41P-201ENST00000364426 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.91□□□□□ -1.62
RNU4-41P-201ENST00000364426 NBPF26B4DH59 902 aa4.9□□□□□ -1.63
RNU4-41P-201ENST00000364426 P3H3Q8IVL6 736 aa4.9□□□□□ -1.63
RNU4-41P-201ENST00000364426 CDHR5Q9HBB8 845 aa4.9□□□□□ -1.63
RNU4-41P-201ENST00000364426 WBP1LQ9NX94 342 aa4.9□□□□□ -1.63
RNU4-41P-201ENST00000364426 TSR3Q9UJK0 312 aaKnown RBP4.9□□□□□ -1.63
RNU4-41P-201ENST00000364426 C3orf80F5H4A9 247 aa4.89□□□□□ -1.63
RNU4-41P-201ENST00000364426 TATDN2Q93075 761 aa4.89□□□□□ -1.63
RNU4-41P-201ENST00000364426 PLCB2Q00722 1185 aa4.88□□□□□ -1.63
RNU4-41P-201ENST00000364426 PNMA3Q9UL41 463 aa4.88□□□□□ -1.63
RNU4-41P-201ENST00000364426 HPS5Q9UPZ3 1129 aa4.88□□□□□ -1.63
RNU4-41P-201ENST00000364426 SMAPO00193 183 aa4.87□□□□□ -1.63
RNU4-41P-201ENST00000364426 MLLT3P42568 568 aaPredicted RBP4.87□□□□□ -1.63
RNU4-41P-201ENST00000364426 PADI6Q6TGC4 694 aa4.86□□□□□ -1.63
RNU4-41P-201ENST00000364426 NUDT18Q6ZVK8 323 aa4.86□□□□□ -1.63
RNU4-41P-201ENST00000364426 SAMD7Q7Z3H4 446 aa4.86□□□□□ -1.63
RNU4-41P-201ENST00000364426 PPP4CP60510 307 aa4.85□□□□□ -1.63
RNU4-41P-201ENST00000364426 KCNC4Q03721 635 aa4.85□□□□□ -1.63
RNU4-41P-201ENST00000364426 PTGDRQ13258 359 aa4.85□□□□□ -1.63
RNU4-41P-201ENST00000364426 EYA1Q99502 592 aa4.85□□□□□ -1.63
RNU4-41P-201ENST00000364426 NECTIN2Q92692 538 aa4.84□□□□□ -1.63
RNU4-41P-201ENST00000364426 HDGFP51858 240 aaKnown RBP4.83□□□□□ -1.64
RNU4-41P-201ENST00000364426 TJAP1Q5JTD0 557 aa4.83□□□□□ -1.64
RNU4-41P-201ENST00000364426 SLF2Q8IX21 1173 aa4.82□□□□□ -1.64
RNU4-41P-201ENST00000364426 TESPA1A2RU30 521 aaPredicted RBP4.81□□□□□ -1.64
RNU4-41P-201ENST00000364426 SEMA3EO15041 775 aa4.81□□□□□ -1.64
RNU4-41P-201ENST00000364426 FCHSD2O94868 740 aa4.81□□□□□ -1.64
RNU4-41P-201ENST00000364426 SWT1Q5T5J6 900 aaKnown RBP4.81□□□□□ -1.64
RNU4-41P-201ENST00000364426 IL21Q9HBE4 155 aa4.81□□□□□ -1.64
RNU4-41P-201ENST00000364426 ADGRG1Q9Y653 693 aa4.81□□□□□ -1.64
RNU4-41P-201ENST00000364426 DNAJB2P25686 324 aa4.8□□□□□ -1.64
RNU4-41P-201ENST00000364426 APLP1P51693 650 aa4.8□□□□□ -1.64
RNU4-41P-201ENST00000364426 RBM46Q8TBY0 533 aaKnown RBP4.8□□□□□ -1.64
RNU4-41P-201ENST00000364426 MTRQ99707 1265 aa4.8□□□□□ -1.64
RNU4-41P-201ENST00000364426 NUTM2FA1L443 756 aa4.79□□□□□ -1.64
RNU4-41P-201ENST00000364426 SLC4A3P48751 1232 aa4.79□□□□□ -1.64
RNU4-41P-201ENST00000364426 HIC1Q14526 733 aa4.79□□□□□ -1.64
RNU4-41P-201ENST00000364426 SMYD5Q6GMV2 418 aa4.79□□□□□ -1.64
RNU4-41P-201ENST00000364426 TMEM134Q9H6X4 195 aa4.79□□□□□ -1.64
RNU4-41P-201ENST00000364426 PRR14Q9BWN1 585 aa4.78□□□□□ -1.64
RNU4-41P-201ENST00000364426 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.77□□□□□ -1.65
RNU4-41P-201ENST00000364426 RCCD1A6NED2 376 aa4.77□□□□□ -1.65
RNU4-41P-201ENST00000364426 GPR37O15354 613 aa4.77□□□□□ -1.65
RNU4-41P-201ENST00000364426 RNF40O75150 1001 aa4.77□□□□□ -1.65
RNU4-41P-201ENST00000364426 IRX2Q9BZI1 471 aaPredicted RBP4.77□□□□□ -1.65
RNU4-41P-201ENST00000364426 OATP04181 439 aa4.76□□□□□ -1.65
RNU4-41P-201ENST00000364426 PXYLP1Q8TE99 480 aa4.76□□□□□ -1.65
RNU4-41P-201ENST00000364426 ZNF516Q92618 1163 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms