RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 LRRC9Q6ZRR7 1453 aa10.38□□□□□ -0.75
CDC42SE2-201ENST00000360515 SHPRHQ149N8 1683 aa10.38□□□□□ -0.75
CDC42SE2-201ENST00000360515 CDK11AQ9UQ88 783 aaPredicted RBP10.38□□□□□ -0.75
CDC42SE2-201ENST00000360515 NCOA2Q15596 1464 aa10.38□□□□□ -0.75
CDC42SE2-201ENST00000360515 ABCC3O15438 1527 aa10.37□□□□□ -0.75
CDC42SE2-201ENST00000360515 CEBPAP49715 358 aaPredicted RBP10.36□□□□□ -0.75
CDC42SE2-201ENST00000360515 CDK12Q9NYV4 1490 aaPredicted RBP10.36□□□□□ -0.75
CDC42SE2-201ENST00000360515 FAM135BQ49AJ0 1406 aa10.36□□□□□ -0.75
CDC42SE2-201ENST00000360515 SETD1AO15047 1707 aaKnown RBP10.35□□□□□ -0.75
CDC42SE2-201ENST00000360515 TET3O43151 1660 aa10.35□□□□□ -0.75
CDC42SE2-201ENST00000360515 LAMC1P11047 1609 aa10.35□□□□□ -0.75
CDC42SE2-201ENST00000360515 ZNF335Q9H4Z2 1342 aaPredicted RBP10.35□□□□□ -0.75
CDC42SE2-201ENST00000360515 ARHGAP31Q2M1Z3 1444 aa10.35□□□□□ -0.75
CDC42SE2-201ENST00000360515 MAP3K1Q13233 1512 aa10.34□□□□□ -0.75
CDC42SE2-201ENST00000360515 EHBP1L1Q8N3D4 1523 aa10.34□□□□□ -0.75
CDC42SE2-201ENST00000360515 NPHP4O75161 1426 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE2-201ENST00000360515 DHX29Q7Z478 1369 aaKnown RBP10.33□□□□□ -0.76
CDC42SE2-201ENST00000360515 PRDM15P57071 1507 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE2-201ENST00000360515 LMTK2Q8IWU2 1503 aa10.33□□□□□ -0.76
CDC42SE2-201ENST00000360515 AFAP1Q8N556 730 aa10.32□□□□□ -0.76
CDC42SE2-201ENST00000360515 CEP162Q5TB80 1403 aa10.31□□□□□ -0.76
CDC42SE2-201ENST00000360515 CROCC2H7BZ55 1655 aa10.31□□□□□ -0.76
CDC42SE2-201ENST00000360515 AHDC1Q5TGY3 1603 aaPredicted RBP10.31□□□□□ -0.76
CDC42SE2-201ENST00000360515 NKTRP30414 1462 aaKnown RBP10.31□□□□□ -0.76
CDC42SE2-201ENST00000360515 NCOA3Q9Y6Q9 1424 aa10.3□□□□□ -0.76
CDC42SE2-201ENST00000360515 COL16A1Q07092 1604 aaPredicted RBP10.3□□□□□ -0.76
CDC42SE2-201ENST00000360515 TOM1O60784 492 aa10.3□□□□□ -0.76
CDC42SE2-201ENST00000360515 TNRQ92752 1358 aa10.3□□□□□ -0.76
CDC42SE2-201ENST00000360515 NCKAP5LQ9HCH0 1330 aa10.3□□□□□ -0.76
CDC42SE2-201ENST00000360515 MIA2Q96PC5 1412 aa10.29□□□□□ -0.76
CDC42SE2-201ENST00000360515 ERVK-7P63135 1459 aa10.29□□□□□ -0.76
CDC42SE2-201ENST00000360515 CHD2O14647 1828 aaKnown RBP10.29□□□□□ -0.76
CDC42SE2-201ENST00000360515 PTPN23Q9H3S7 1636 aa10.29□□□□□ -0.76
CDC42SE2-201ENST00000360515 HSPA1LP34931 641 aa10.29□□□□□ -0.76
CDC42SE2-201ENST00000360515 ROBO1Q9Y6N7 1651 aa10.29□□□□□ -0.76
CDC42SE2-201ENST00000360515 UBAP1LF5GYI3 381 aa10.29□□□□□ -0.76
CDC42SE2-201ENST00000360515 DIP2AQ14689 1571 aa10.28□□□□□ -0.76
CDC42SE2-201ENST00000360515 RGS17Q9UGC6 210 aaPredicted RBP10.27□□□□□ -0.76
CDC42SE2-201ENST00000360515 CCDC141Q6ZP82 1450 aa10.27□□□□□ -0.77
CDC42SE2-201ENST00000360515 P3H3Q8IVL6 736 aa10.26□□□□□ -0.77
CDC42SE2-201ENST00000360515 CEP152O94986 1710 aa10.26□□□□□ -0.77
CDC42SE2-201ENST00000360515 FGD6Q6ZV73 1430 aa10.25□□□□□ -0.77
CDC42SE2-201ENST00000360515 MLECQ14165 292 aa10.25□□□□□ -0.77
CDC42SE2-201ENST00000360515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDC42SE2-201ENST00000360515 SCAF11Q99590 1463 aaKnown RBP10.24□□□□□ -0.77
CDC42SE2-201ENST00000360515 PHLPP1O60346 1717 aa10.24□□□□□ -0.77
CDC42SE2-201ENST00000360515 SPAG9O60271 1321 aaKnown RBP10.24□□□□□ -0.77
CDC42SE2-201ENST00000360515 PIK3C2BO00750 1634 aa10.23□□□□□ -0.77
CDC42SE2-201ENST00000360515 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
CDC42SE2-201ENST00000360515 NHSL1Q5SYE7 1610 aa10.23□□□□□ -0.77
CDC42SE2-201ENST00000360515 EFCAB6Q5THR3 1501 aa10.2□□□□□ -0.78
CDC42SE2-201ENST00000360515 DUOX2Q9NRD8 1548 aa10.2□□□□□ -0.78
CDC42SE2-201ENST00000360515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE2-201ENST00000360515 HNRNPUL2Q1KMD3 747 aaKnown RBP10.19□□□□□ -0.78
CDC42SE2-201ENST00000360515 ADGRB3O60242 1522 aa10.19□□□□□ -0.78
CDC42SE2-201ENST00000360515 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
CDC42SE2-201ENST00000360515 LRP5O75197 1615 aa10.19□□□□□ -0.78
CDC42SE2-201ENST00000360515 CHIC1Q5VXU3 224 aa10.19□□□□□ -0.78
CDC42SE2-201ENST00000360515 THEMISQ8N1K5 641 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE2-201ENST00000360515 ESF1Q9H501 851 aaKnown RBP10.19□□□□□ -0.78
CDC42SE2-201ENST00000360515 ANKLE2Q86XL3 938 aa10.18□□□□□ -0.78
CDC42SE2-201ENST00000360515 ERBINQ96RT1 1412 aa10.17□□□□□ -0.78
CDC42SE2-201ENST00000360515 COL22A1Q8NFW1 1626 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE2-201ENST00000360515 SPHKAPQ2M3C7 1700 aa10.16□□□□□ -0.78
CDC42SE2-201ENST00000360515 PRAG1Q86YV5 1406 aa10.16□□□□□ -0.78
CDC42SE2-201ENST00000360515 IQGAP3Q86VI3 1631 aa10.16□□□□□ -0.78
CDC42SE2-201ENST00000360515 GCC2Q8IWJ2 1684 aa10.15□□□□□ -0.78
CDC42SE2-201ENST00000360515 XRN1Q8IZH2 1706 aaKnown RBP10.15□□□□□ -0.78
CDC42SE2-201ENST00000360515 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.15□□□□□ -0.78
CDC42SE2-201ENST00000360515 RPRD2Q5VT52 1461 aaKnown RBP10.14□□□□□ -0.79
CDC42SE2-201ENST00000360515 NOS1P29475 1434 aa10.14□□□□□ -0.79
CDC42SE2-201ENST00000360515 DCCP43146 1447 aa10.13□□□□□ -0.79
CDC42SE2-201ENST00000360515 CCNB3Q8WWL7 1395 aa10.13□□□□□ -0.79
CDC42SE2-201ENST00000360515 MARF1Q9Y4F3 1742 aaKnown RBP10.13□□□□□ -0.79
CDC42SE2-201ENST00000360515 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE2-201ENST00000360515 TMEM131LA2VDJ0 1609 aa10.12□□□□□ -0.79
CDC42SE2-201ENST00000360515 ZFYVE9O95405 1425 aa10.12□□□□□ -0.79
CDC42SE2-201ENST00000360515 LRP6O75581 1613 aa10.11□□□□□ -0.79
CDC42SE2-201ENST00000360515 PIK3R4Q99570 1358 aa10.1□□□□□ -0.79
CDC42SE2-201ENST00000360515 SPATA31A6Q5VVP1 1343 aa10.1□□□□□ -0.79
CDC42SE2-201ENST00000360515 JCADQ9P266 1359 aa10.1□□□□□ -0.79
CDC42SE2-201ENST00000360515 TMEM2Q9UHN6 1383 aa10.09□□□□□ -0.79
CDC42SE2-201ENST00000360515 UNC13BO14795 1591 aa10.08□□□□□ -0.8
CDC42SE2-201ENST00000360515 MYO5BQ9ULV0 1848 aa10.08□□□□□ -0.8
CDC42SE2-201ENST00000360515 SETD5Q9C0A6 1442 aa10.07□□□□□ -0.8
CDC42SE2-201ENST00000360515 ADGRL2O95490 1459 aa10.07□□□□□ -0.8
CDC42SE2-201ENST00000360515 POTEAQ6S8J7 498 aa10.07□□□□□ -0.8
CDC42SE2-201ENST00000360515 HNRNPMP52272 730 aaKnown RBP eCLIP10.06□□□□□ -0.83e-7■■■■■ 27.8
CDC42SE2-201ENST00000360515 SETBP1Q9Y6X0 1596 aa10.06□□□□□ -0.8
CDC42SE2-201ENST00000360515 NRXN3Q9Y4C0 1643 aa10.06□□□□□ -0.8
CDC42SE2-201ENST00000360515 KCNA6P17658 529 aa10.05□□□□□ -0.8
CDC42SE2-201ENST00000360515 PHF23Q9BUL5 403 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE2-201ENST00000360515 PLEKHG1Q9ULL1 1385 aa10.05□□□□□ -0.8
CDC42SE2-201ENST00000360515 CFDP1Q9UEE9 299 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE2-201ENST00000360515 MTUS2Q5JR59 1369 aa10.03□□□□□ -0.8
CDC42SE2-201ENST00000360515 FBXO31Q5XUX0 539 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE2-201ENST00000360515 UPF1Q92900 1129 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDC42SE2-201ENST00000360515 TRPM2O94759 1503 aa10.02□□□□□ -0.81
CDC42SE2-201ENST00000360515 PLPPR3Q6T4P5 718 aa10.01□□□□□ -0.81
CDC42SE2-201ENST00000360515 TMEM94Q12767 1356 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms