RNA–Protein interactions for RNA: ENST00000360382.4

SDHAF3-201, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 2 BASIC

Gene SDHAF3, Length 731 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-201ENST00000360382 KCNK17Q96T54 332 aa11.54□□□□□ -0.56
SDHAF3-201ENST00000360382 ANO8Q9HCE9 1232 aaPredicted RBP11.53□□□□□ -0.56
SDHAF3-201ENST00000360382 FOSBP53539 338 aa11.52□□□□□ -0.57
SDHAF3-201ENST00000360382 E2F4Q16254 413 aa11.52□□□□□ -0.57
SDHAF3-201ENST00000360382 JPH4Q96JJ6 628 aa11.52□□□□□ -0.57
SDHAF3-201ENST00000360382 SUPT5HO00267 1087 aaKnown RBP11.51□□□□□ -0.57
SDHAF3-201ENST00000360382 DMRTA1Q5VZB9 504 aa11.5□□□□□ -0.57
SDHAF3-201ENST00000360382 RNF166Q96A37 237 aaPredicted RBP11.5□□□□□ -0.57
SDHAF3-201ENST00000360382 MYT1LQ9UL68 1186 aa11.49□□□□□ -0.57
SDHAF3-201ENST00000360382 ZDHHC16Q969W1 377 aa11.48□□□□□ -0.57
SDHAF3-201ENST00000360382 PLCB2Q00722 1185 aa11.46□□□□□ -0.57
SDHAF3-201ENST00000360382 ADGRD1Q6QNK2 874 aa11.46□□□□□ -0.57
SDHAF3-201ENST00000360382 ADAM33Q9BZ11 813 aa11.46□□□□□ -0.57
SDHAF3-201ENST00000360382 BCL2L12Q9HB09 334 aa11.46□□□□□ -0.57
SDHAF3-201ENST00000360382 PTPREP23469 700 aa11.45□□□□□ -0.58
SDHAF3-201ENST00000360382 PTGER2P43116 358 aa11.45□□□□□ -0.58
SDHAF3-201ENST00000360382 DDX12PQ92771 950 aa11.45□□□□□ -0.58
SDHAF3-201ENST00000360382 PCDHGA10Q9Y5H3 936 aa11.45□□□□□ -0.58
SDHAF3-201ENST00000360382 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
SDHAF3-201ENST00000360382 NESP48681 1621 aa11.42□□□□□ -0.58
SDHAF3-201ENST00000360382 CADPSQ9ULU8 1353 aa11.42□□□□□ -0.58
SDHAF3-201ENST00000360382 PHF14O94880 888 aa11.42□□□□□ -0.58
SDHAF3-201ENST00000360382 PDIA6Q15084 440 aa11.42□□□□□ -0.58
SDHAF3-201ENST00000360382 TYW1BQ6NUM6 668 aa11.42□□□□□ -0.58
SDHAF3-201ENST00000360382 RBM33Q96EV2 1170 aaKnown RBP11.4□□□□□ -0.58
SDHAF3-201ENST00000360382 STAC3Q96MF2 364 aa11.4□□□□□ -0.58
SDHAF3-201ENST00000360382 LAMC3Q9Y6N6 1575 aa11.4□□□□□ -0.58
SDHAF3-201ENST00000360382 SPDYE16A6NNV3 312 aaPredicted RBP11.39□□□□□ -0.59
SDHAF3-201ENST00000360382 TK2O00142 265 aa11.39□□□□□ -0.59
SDHAF3-201ENST00000360382 FBXW7Q969H0 707 aa11.39□□□□□ -0.59
SDHAF3-201ENST00000360382 NBR1Q14596 966 aa11.38□□□□□ -0.59
SDHAF3-201ENST00000360382 CFTRP13569 1480 aa11.38□□□□□ -0.59
SDHAF3-201ENST00000360382 EPAS1Q99814 870 aa11.37□□□□□ -0.59
SDHAF3-201ENST00000360382 HAP1P54257 671 aaPredicted RBP11.36□□□□□ -0.59
SDHAF3-201ENST00000360382 VPS9D1Q9Y2B5 631 aa11.36□□□□□ -0.59
SDHAF3-201ENST00000360382 GRXCR2A6NFK2 248 aa11.35□□□□□ -0.59
SDHAF3-201ENST00000360382 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
SDHAF3-201ENST00000360382 ERCC6Q03468 1493 aa11.33□□□□□ -0.6
SDHAF3-201ENST00000360382 PPP1R3GB7ZBB8 358 aa11.33□□□□□ -0.6
SDHAF3-201ENST00000360382 HRO43593 1189 aa11.33□□□□□ -0.6
SDHAF3-201ENST00000360382 KCNV2Q8TDN2 545 aa11.33□□□□□ -0.6
SDHAF3-201ENST00000360382 ZBED2Q9BTP6 218 aa11.33□□□□□ -0.6
SDHAF3-201ENST00000360382 ARIH1Q9Y4X5 557 aaPredicted RBP11.33□□□□□ -0.6
SDHAF3-201ENST00000360382 MAP3K7O43318 606 aa11.32□□□□□ -0.6
SDHAF3-201ENST00000360382 COL9A1P20849 921 aa11.32□□□□□ -0.6
SDHAF3-201ENST00000360382 C6orf132Q5T0Z8 1188 aa11.31□□□□□ -0.6
SDHAF3-201ENST00000360382 SLC4A5Q9BY07 1137 aa11.3□□□□□ -0.6
SDHAF3-201ENST00000360382 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
SDHAF3-201ENST00000360382 PROX2Q3B8N5 592 aa11.29□□□□□ -0.6
SDHAF3-201ENST00000360382 FANCD2Q9BXW9 1451 aa11.28□□□□□ -0.6
SDHAF3-201ENST00000360382 TSR1Q2NL82 804 aaKnown RBP11.28□□□□□ -0.6
SDHAF3-201ENST00000360382 ARHGEF1Q92888 912 aaKnown RBP11.28□□□□□ -0.6
SDHAF3-201ENST00000360382 KCTD12Q96CX2 325 aaKnown RBP11.28□□□□□ -0.6
SDHAF3-201ENST00000360382 P3H3Q8IVL6 736 aa11.26□□□□□ -0.61
SDHAF3-201ENST00000360382 MRPL50Q8N5N7 158 aaKnown RBP11.26□□□□□ -0.61
SDHAF3-201ENST00000360382 NBPF3Q9H094 633 aa11.26□□□□□ -0.61
SDHAF3-201ENST00000360382 GOLGA8CPA6NN73 597 aa11.25□□□□□ -0.61
SDHAF3-201ENST00000360382 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
SDHAF3-201ENST00000360382 KIF21AQ7Z4S6 1674 aa11.24□□□□□ -0.61
SDHAF3-201ENST00000360382 PRIM1P49642 420 aaKnown RBP11.23□□□□□ -0.61
SDHAF3-201ENST00000360382 BHMG1C9JSJ3 638 aaPredicted RBP11.22□□□□□ -0.61
SDHAF3-201ENST00000360382 RABGEF1Q9UJ41 708 aa11.22□□□□□ -0.61
SDHAF3-201ENST00000360382 MRC2Q9UBG0 1479 aa11.21□□□□□ -0.61
SDHAF3-201ENST00000360382 OSBPP22059 807 aa11.21□□□□□ -0.61
SDHAF3-201ENST00000360382 KIAA1468Q9P260 1216 aa11.21□□□□□ -0.61
SDHAF3-201ENST00000360382 PRDM2Q13029 1718 aa11.21□□□□□ -0.62
SDHAF3-201ENST00000360382 THOC2Q8NI27 1593 aaKnown RBP11.2□□□□□ -0.62
SDHAF3-201ENST00000360382 MLLT3P42568 568 aaPredicted RBP11.2□□□□□ -0.62
SDHAF3-201ENST00000360382 HCSTQ9UBK5 93 aa11.2□□□□□ -0.62
SDHAF3-201ENST00000360382 WNT2BQ93097 391 aa11.19□□□□□ -0.62
SDHAF3-201ENST00000360382 CUX2O14529 1486 aa11.19□□□□□ -0.62
SDHAF3-201ENST00000360382 TRIM6-TRIM34B2RNG4 842 aa11.18□□□□□ -0.62
SDHAF3-201ENST00000360382 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
SDHAF3-201ENST00000360382 PTPN5P54829 565 aa11.17□□□□□ -0.62
SDHAF3-201ENST00000360382 SEPT9Q9UHD8 586 aaPredicted RBP11.17□□□□□ -0.62
SDHAF3-201ENST00000360382 WDR62O43379 1518 aa11.16□□□□□ -0.62
SDHAF3-201ENST00000360382 URB2Q14146 1524 aaKnown RBP11.15□□□□□ -0.62
SDHAF3-201ENST00000360382 SEMA3EO15041 775 aa11.14□□□□□ -0.63
SDHAF3-201ENST00000360382 TSKSQ9UJT2 592 aa11.14□□□□□ -0.63
SDHAF3-201ENST00000360382 KDM2AQ9Y2K7 1162 aa11.14□□□□□ -0.63
SDHAF3-201ENST00000360382 THSD4Q6ZMP0 1018 aa11.13□□□□□ -0.63
SDHAF3-201ENST00000360382 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
SDHAF3-201ENST00000360382 CERKQ8TCT0 537 aa11.13□□□□□ -0.63
SDHAF3-201ENST00000360382 CDCA7LQ96GN5 454 aa11.13□□□□□ -0.63
SDHAF3-201ENST00000360382 ONECUT3O60422 494 aaPredicted RBP11.12□□□□□ -0.63
SDHAF3-201ENST00000360382 PRSS12P56730 875 aa11.12□□□□□ -0.63
SDHAF3-201ENST00000360382 ANKK1Q8NFD2 765 aa11.12□□□□□ -0.63
SDHAF3-201ENST00000360382 ABCC8Q09428 1581 aa11.11□□□□□ -0.63
SDHAF3-201ENST00000360382 TOPBP1Q92547 1522 aa11.11□□□□□ -0.63
SDHAF3-201ENST00000360382 LAPTM4BQ86VI4 370 aa11.1□□□□□ -0.63
SDHAF3-201ENST00000360382 ZFRQ96KR1 1074 aaKnown RBP11.1□□□□□ -0.63
SDHAF3-201ENST00000360382 DNMBPQ6XZF7 1577 aa11.09□□□□□ -0.63
SDHAF3-201ENST00000360382 SMAPO00193 183 aa11.08□□□□□ -0.64
SDHAF3-201ENST00000360382 BCAMP50895 628 aa11.08□□□□□ -0.64
SDHAF3-201ENST00000360382 FAM98CQ17RN3 349 aaKnown RBP11.08□□□□□ -0.64
SDHAF3-201ENST00000360382 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
SDHAF3-201ENST00000360382 FAM198AQ9UFP1 575 aa11.07□□□□□ -0.64
SDHAF3-201ENST00000360382 CUX1P39880 1505 aa11.06□□□□□ -0.64
SDHAF3-201ENST00000360382 NBPF26B4DH59 902 aa11.06□□□□□ -0.64
SDHAF3-201ENST00000360382 VSIG10Q8N0Z9 540 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms