RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 EXOC6Q8TAG9 804 aa18.67■□□□□ 0.58
APAF1-203ENST00000359972 FBXW7Q969H0 707 aa18.67■□□□□ 0.58
APAF1-203ENST00000359972 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
APAF1-203ENST00000359972 MNS1Q8NEH6 495 aa18.66■□□□□ 0.58
APAF1-203ENST00000359972 AK7Q96M32 723 aa18.66■□□□□ 0.58
APAF1-203ENST00000359972 RUFY1Q96T51 708 aa18.66■□□□□ 0.58
APAF1-203ENST00000359972 SKIDA1Q1XH10 827 aa18.65■□□□□ 0.58
APAF1-203ENST00000359972 MCTP1Q6DN14 999 aa18.65■□□□□ 0.58
APAF1-203ENST00000359972 CENPQQ7L2Z9 268 aaPredicted RBP18.64■□□□□ 0.58
APAF1-203ENST00000359972 TPM1P09493 284 aa18.64■□□□□ 0.57
APAF1-203ENST00000359972 GOLGA3Q08378 1498 aa18.63■□□□□ 0.57
APAF1-203ENST00000359972 DHX37Q8IY37 1157 aaKnown RBP18.63■□□□□ 0.57
APAF1-203ENST00000359972 RTF1Q92541 710 aaKnown RBP18.63■□□□□ 0.57
APAF1-203ENST00000359972 CCDC39Q9UFE4 941 aa18.62■□□□□ 0.57
APAF1-203ENST00000359972 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
APAF1-203ENST00000359972 NPM1P06748 294 aaKnown RBP eCLIP18.62■□□□□ 0.57
APAF1-203ENST00000359972 HSP90B2PQ58FF3 399 aa18.62■□□□□ 0.57
APAF1-203ENST00000359972 NASPP49321 788 aaPredicted RBP18.62■□□□□ 0.57
APAF1-203ENST00000359972 CRBNQ96SW2 442 aa18.62■□□□□ 0.57
APAF1-203ENST00000359972 DIAPH3Q9NSV4 1193 aa18.61■□□□□ 0.57
APAF1-203ENST00000359972 WWC1Q8IX03 1113 aa18.61■□□□□ 0.57
APAF1-203ENST00000359972 GPATCH3Q96I76 525 aa18.61■□□□□ 0.57
APAF1-203ENST00000359972 CHMP5Q9NZZ3 219 aa18.6■□□□□ 0.57
APAF1-203ENST00000359972 CCDC191Q8NCU4 936 aa18.6■□□□□ 0.57
APAF1-203ENST00000359972 CENPJQ9HC77 1338 aaPredicted RBP18.6■□□□□ 0.57
APAF1-203ENST00000359972 GORABQ5T7V8 394 aa18.6■□□□□ 0.57
APAF1-203ENST00000359972 ACBD3Q9H3P7 528 aa18.6■□□□□ 0.57
APAF1-203ENST00000359972 PCMTD1Q96MG8 357 aaPredicted RBP18.59■□□□□ 0.57
APAF1-203ENST00000359972 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
APAF1-203ENST00000359972 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
APAF1-203ENST00000359972 MRE11P49959 708 aa18.59■□□□□ 0.57
APAF1-203ENST00000359972 RILPL2Q969X0 211 aa18.59■□□□□ 0.57
APAF1-203ENST00000359972 EEA1Q15075 1411 aa18.59■□□□□ 0.57
APAF1-203ENST00000359972 FAM184AQ8NB25 1140 aa18.59■□□□□ 0.57
APAF1-203ENST00000359972 AEBP1Q8IUX7 1158 aa18.58■□□□□ 0.57
APAF1-203ENST00000359972 SLC4A10Q6U841 1118 aa18.58■□□□□ 0.56
APAF1-203ENST00000359972 ATP6V1DQ9Y5K8 247 aa18.57■□□□□ 0.56
APAF1-203ENST00000359972 KIF3AQ9Y496 699 aa18.57■□□□□ 0.56
APAF1-203ENST00000359972 RALBP1Q15311 655 aa18.57■□□□□ 0.56
APAF1-203ENST00000359972 ANKRD45Q5TZF3 282 aa18.56■□□□□ 0.56
APAF1-203ENST00000359972 LEKR1Q6ZMV7 388 aa18.56■□□□□ 0.56
APAF1-203ENST00000359972 ABCC9O60706 1549 aa18.56■□□□□ 0.56
APAF1-203ENST00000359972 SAFB2Q14151 953 aaKnown RBP eCLIP18.56■□□□□ 0.56
APAF1-203ENST00000359972 PRDM10Q9NQV6 1147 aa18.56■□□□□ 0.56
APAF1-203ENST00000359972 RNF214Q8ND24 703 aa18.56■□□□□ 0.56
APAF1-203ENST00000359972 RRP1P56182 461 aaKnown RBP18.55■□□□□ 0.56
APAF1-203ENST00000359972 ERICH4A6NGS2 130 aa18.54■□□□□ 0.56
APAF1-203ENST00000359972 SRPK2P78362 688 aaKnown RBP18.54■□□□□ 0.56
APAF1-203ENST00000359972 HMMRO75330 724 aa18.53■□□□□ 0.56
APAF1-203ENST00000359972 TSPYL1Q9H0U9 437 aa18.53■□□□□ 0.56
APAF1-203ENST00000359972 BICD2Q8TD16 824 aa18.53■□□□□ 0.56
APAF1-203ENST00000359972 RRP9O43818 475 aaKnown RBP18.53■□□□□ 0.56
APAF1-203ENST00000359972 UQCRHLA0A096LP55 91 aa18.52■□□□□ 0.56
APAF1-203ENST00000359972 UQCRHP07919 91 aa18.52■□□□□ 0.56
APAF1-203ENST00000359972 FOXD1Q16676 465 aa18.52■□□□□ 0.56
APAF1-203ENST00000359972 TOMM22Q9NS69 142 aa18.52■□□□□ 0.56
APAF1-203ENST00000359972 SASS6Q6UVJ0 657 aa18.51■□□□□ 0.55
APAF1-203ENST00000359972 CFDP1Q9UEE9 299 aaPredicted RBP18.51■□□□□ 0.55
APAF1-203ENST00000359972 IPO7O95373 1038 aaKnown RBP18.51■□□□□ 0.55
APAF1-203ENST00000359972 CDR1P51861 262 aa18.5■□□□□ 0.55
APAF1-203ENST00000359972 BCL2L13Q9BXK5 485 aa18.5■□□□□ 0.55
APAF1-203ENST00000359972 VPS53Q5VIR6 699 aa18.49■□□□□ 0.55
APAF1-203ENST00000359972 NAP1L1P55209 391 aaKnown RBP18.49■□□□□ 0.55
APAF1-203ENST00000359972 MARCH6O60337 910 aa18.49■□□□□ 0.55
APAF1-203ENST00000359972 TTLL5Q6EMB2 1281 aa18.49■□□□□ 0.55
APAF1-203ENST00000359972 ZNF330Q9Y3S2 320 aaPredicted RBP18.49■□□□□ 0.55
APAF1-203ENST00000359972 CCDC9Q9Y3X0 531 aaKnown RBP18.49■□□□□ 0.55
APAF1-203ENST00000359972 TRAK2O60296 914 aa18.48■□□□□ 0.55
APAF1-203ENST00000359972 CCNB3Q8WWL7 1395 aa18.48■□□□□ 0.55
APAF1-203ENST00000359972 FRAT2O75474 233 aaPredicted RBP18.47■□□□□ 0.55
APAF1-203ENST00000359972 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
APAF1-203ENST00000359972 FOSBP53539 338 aa18.47■□□□□ 0.55
APAF1-203ENST00000359972 PDILTQ8N807 584 aa18.46■□□□□ 0.55
APAF1-203ENST00000359972 PDE3BQ13370 1112 aa18.46■□□□□ 0.55
APAF1-203ENST00000359972 CAGE1Q8TC20 777 aa18.46■□□□□ 0.55
APAF1-203ENST00000359972 PAK3O75914 559 aaPredicted RBP18.45■□□□□ 0.54
APAF1-203ENST00000359972 CAVIN1Q6NZI2 390 aaKnown RBP18.45■□□□□ 0.54
APAF1-203ENST00000359972 STK31Q9BXU1 1019 aa18.45■□□□□ 0.54
APAF1-203ENST00000359972 RRP7AQ9Y3A4 280 aaKnown RBP18.45■□□□□ 0.54
APAF1-203ENST00000359972 CCDC173Q0VFZ6 552 aa18.44■□□□□ 0.54
APAF1-203ENST00000359972 AXDND1Q5T1B0 1012 aaPredicted RBP18.44■□□□□ 0.54
APAF1-203ENST00000359972 COG6Q9Y2V7 657 aa18.44■□□□□ 0.54
APAF1-203ENST00000359972 MPNDQ8N594 471 aa18.44■□□□□ 0.54
APAF1-203ENST00000359972 SETD5Q9C0A6 1442 aa18.44■□□□□ 0.54
APAF1-203ENST00000359972 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
APAF1-203ENST00000359972 VPS37CA5D8V6 355 aaPredicted RBP18.43■□□□□ 0.54
APAF1-203ENST00000359972 SPC24Q8NBT2 197 aa18.43■□□□□ 0.54
APAF1-203ENST00000359972 ERCC4Q92889 916 aaPredicted RBP18.42■□□□□ 0.54
APAF1-203ENST00000359972 ANO2Q9NQ90 1003 aa18.42■□□□□ 0.54
APAF1-203ENST00000359972 ROCK2O75116 1388 aaKnown RBP18.42■□□□□ 0.54
APAF1-203ENST00000359972 PLEKHD1A6NEE1 506 aa18.42■□□□□ 0.54
APAF1-203ENST00000359972 TNIKQ9UKE5 1360 aa18.41■□□□□ 0.54
APAF1-203ENST00000359972 RBM25P49756 843 aaKnown RBP18.41■□□□□ 0.54
APAF1-203ENST00000359972 DEF6Q9H4E7 631 aa18.41■□□□□ 0.54
APAF1-203ENST00000359972 ANKRD20A12PQ8NF67 263 aa18.41■□□□□ 0.54
APAF1-203ENST00000359972 NUCB2P80303 420 aa18.4■□□□□ 0.54
APAF1-203ENST00000359972 CBX1P83916 185 aa18.39■□□□□ 0.53
APAF1-203ENST00000359972 UBE2Q2Q8WVN8 375 aa18.39■□□□□ 0.53
APAF1-203ENST00000359972 GPATCH11Q8N954 259 aa18.39■□□□□ 0.53
APAF1-203ENST00000359972 HMGN5P82970 282 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms