RNA–Protein interactions for RNA: ENST00000359568.9

PCNT-201, Transcript of pericentrin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCNT, Length 10,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNT-201ENST00000359568 TRIM6-TRIM34B2RNG4 842 aa12.95□□□□□ -0.34
PCNT-201ENST00000359568 HMMRO75330 724 aa12.94□□□□□ -0.34
PCNT-201ENST00000359568 BECN2A8MW95 431 aa12.94□□□□□ -0.34
PCNT-201ENST00000359568 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
PCNT-201ENST00000359568 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
PCNT-201ENST00000359568 SMC4Q9NTJ3 1288 aa12.94□□□□□ -0.34
PCNT-201ENST00000359568 CFDP1Q9UEE9 299 aaPredicted RBP12.94□□□□□ -0.34
PCNT-201ENST00000359568 ACBD3Q9H3P7 528 aa12.94□□□□□ -0.34
PCNT-201ENST00000359568 GOLGA2Q08379 1002 aa12.94□□□□□ -0.34
PCNT-201ENST00000359568 HSP90B2PQ58FF3 399 aa12.94□□□□□ -0.34
PCNT-201ENST00000359568 CGNL1Q0VF96 1302 aa12.94□□□□□ -0.34
PCNT-201ENST00000359568 CCDC173Q0VFZ6 552 aa12.93□□□□□ -0.34
PCNT-201ENST00000359568 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
PCNT-201ENST00000359568 A0A0G2JS52 829 aa12.93□□□□□ -0.34
PCNT-201ENST00000359568 HOMER1Q86YM7 354 aa12.93□□□□□ -0.34
PCNT-201ENST00000359568 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
PCNT-201ENST00000359568 CRBNQ96SW2 442 aa12.93□□□□□ -0.34
PCNT-201ENST00000359568 FRAT2O75474 233 aaPredicted RBP12.92□□□□□ -0.34
PCNT-201ENST00000359568 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
PCNT-201ENST00000359568 AK7Q96M32 723 aa12.92□□□□□ -0.34
PCNT-201ENST00000359568 UQCRHLA0A096LP55 91 aa12.92□□□□□ -0.34
PCNT-201ENST00000359568 UQCRHP07919 91 aa12.92□□□□□ -0.34
PCNT-201ENST00000359568 TPM1P09493 284 aa12.92□□□□□ -0.34
PCNT-201ENST00000359568 RDXP35241 583 aaKnown RBP12.92□□□□□ -0.34
PCNT-201ENST00000359568 MNS1Q8NEH6 495 aa12.91□□□□□ -0.34
PCNT-201ENST00000359568 PLIN1O60240 522 aa12.91□□□□□ -0.34
PCNT-201ENST00000359568 MYBBP1AQ9BQG0 1328 aaKnown RBP12.91□□□□□ -0.34
PCNT-201ENST00000359568 H0YHG0 523 aa12.9□□□□□ -0.34
PCNT-201ENST00000359568 FOXD4L6Q3SYB3 417 aaPredicted RBP12.9□□□□□ -0.34
PCNT-201ENST00000359568 TAF7LQ5H9L4 462 aa12.9□□□□□ -0.34
PCNT-201ENST00000359568 FOXD4L3Q6VB84 417 aaPredicted RBP12.9□□□□□ -0.34
PCNT-201ENST00000359568 SOGA1O94964 1423 aa12.9□□□□□ -0.34
PCNT-201ENST00000359568 ZMYND15Q9H091 742 aa12.89□□□□□ -0.35
PCNT-201ENST00000359568 KIF3AQ9Y496 699 aa12.89□□□□□ -0.35
PCNT-201ENST00000359568 FMN1Q68DA7 1419 aa12.89□□□□□ -0.35
PCNT-201ENST00000359568 DHX57Q6P158 1386 aaKnown RBP12.89□□□□□ -0.35
PCNT-201ENST00000359568 CLUAP1Q96AJ1 413 aa12.89□□□□□ -0.35
PCNT-201ENST00000359568 TSPYL1Q9H0U9 437 aa12.89□□□□□ -0.35
PCNT-201ENST00000359568 TSR1Q2NL82 804 aaKnown RBP12.89□□□□□ -0.35
PCNT-201ENST00000359568 REC8O95072 547 aa12.88□□□□□ -0.35
PCNT-201ENST00000359568 U2AF1L5P0DN76 240 aaPredicted RBP12.87□□□□□ -0.35
PCNT-201ENST00000359568 U2AF1Q01081 240 aaKnown RBP eCLIP12.87□□□□□ -0.356e-7■■■■■ 27.8
PCNT-201ENST00000359568 H3BQV1 296 aa12.87□□□□□ -0.35
PCNT-201ENST00000359568 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
PCNT-201ENST00000359568 IFFO2Q5TF58 517 aa12.87□□□□□ -0.35
PCNT-201ENST00000359568 CREBRFQ8IUR6 639 aa12.87□□□□□ -0.35
PCNT-201ENST00000359568 RRP12Q5JTH9 1297 aaKnown RBP12.87□□□□□ -0.35
PCNT-201ENST00000359568 RUFY1Q96T51 708 aa12.87□□□□□ -0.35
PCNT-201ENST00000359568 CCDC191Q8NCU4 936 aa12.87□□□□□ -0.35
PCNT-201ENST00000359568 ESPNB1AK53 854 aa12.86□□□□□ -0.35
PCNT-201ENST00000359568 MCTP1Q6DN14 999 aa12.86□□□□□ -0.35
PCNT-201ENST00000359568 POGKQ9P215 609 aa12.86□□□□□ -0.35
PCNT-201ENST00000359568 ISY1Q9ULR0 285 aaKnown RBP12.86□□□□□ -0.35
PCNT-201ENST00000359568 LEKR1Q6ZMV7 388 aa12.86□□□□□ -0.35
PCNT-201ENST00000359568 NUCB2P80303 420 aa12.86□□□□□ -0.35
PCNT-201ENST00000359568 CCDC146Q8IYE0 955 aa12.86□□□□□ -0.35
PCNT-201ENST00000359568 TRAK2O60296 914 aa12.85□□□□□ -0.35
PCNT-201ENST00000359568 C22orf23Q9BZE7 217 aa12.85□□□□□ -0.35
PCNT-201ENST00000359568 SF3A1Q15459 793 aaKnown RBP12.85□□□□□ -0.35
PCNT-201ENST00000359568 STK11IPQ8N1F8 1099 aa12.85□□□□□ -0.35
PCNT-201ENST00000359568 FOXD1Q16676 465 aa12.85□□□□□ -0.35
PCNT-201ENST00000359568 EIF4G1Q04637 1599 aaKnown RBP12.84□□□□□ -0.35
PCNT-201ENST00000359568 RASSF8Q8NHQ8 419 aa12.84□□□□□ -0.35
PCNT-201ENST00000359568 CCDC18Q5T9S5 1454 aa12.84□□□□□ -0.35
PCNT-201ENST00000359568 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
PCNT-201ENST00000359568 IPO7O95373 1038 aaKnown RBP12.83□□□□□ -0.36
PCNT-201ENST00000359568 CAVIN1Q6NZI2 390 aaKnown RBP12.83□□□□□ -0.36
PCNT-201ENST00000359568 DEF6Q9H4E7 631 aa12.83□□□□□ -0.36
PCNT-201ENST00000359568 PRKRIP1Q9H875 184 aaPredicted RBP12.83□□□□□ -0.36
PCNT-201ENST00000359568 PES1O00541 588 aaKnown RBP12.83□□□□□ -0.36
PCNT-201ENST00000359568 TPD52L1Q16890 204 aaPredicted RBP12.82□□□□□ -0.36
PCNT-201ENST00000359568 TSPY26PQ9H489 355 aa12.82□□□□□ -0.36
PCNT-201ENST00000359568 HSP90AB3PQ58FF7 597 aa12.82□□□□□ -0.36
PCNT-201ENST00000359568 DCTN1Q14203 1278 aa12.82□□□□□ -0.36
PCNT-201ENST00000359568 BCL11BQ9C0K0 894 aaPredicted RBP12.82□□□□□ -0.36
PCNT-201ENST00000359568 PLPPR3Q6T4P5 718 aa12.81□□□□□ -0.36
PCNT-201ENST00000359568 CNTLNQ9NXG0 1405 aa12.81□□□□□ -0.36
PCNT-201ENST00000359568 KANK1Q14678 1352 aa12.81□□□□□ -0.36
PCNT-201ENST00000359568 GRPEL1Q9HAV7 217 aa12.81□□□□□ -0.36
PCNT-201ENST00000359568 ERICH4A6NGS2 130 aa12.81□□□□□ -0.36
PCNT-201ENST00000359568 RNF214Q8ND24 703 aa12.81□□□□□ -0.36
PCNT-201ENST00000359568 PRDM10Q9NQV6 1147 aa12.81□□□□□ -0.36
PCNT-201ENST00000359568 USP47Q96K76 1375 aa12.81□□□□□ -0.36
PCNT-201ENST00000359568 MBD3O95983 291 aa12.81□□□□□ -0.36
PCNT-201ENST00000359568 BBXQ8WY36 941 aaPredicted RBP12.8□□□□□ -0.36
PCNT-201ENST00000359568 PLEKHD1A6NEE1 506 aa12.8□□□□□ -0.36
PCNT-201ENST00000359568 CHMP3Q9Y3E7 222 aa12.8□□□□□ -0.36
PCNT-201ENST00000359568 KANK4Q5T7N3 995 aaPredicted RBP12.8□□□□□ -0.36
PCNT-201ENST00000359568 E9PSI1 815 aa12.79□□□□□ -0.36
PCNT-201ENST00000359568 CDR1P51861 262 aa12.79□□□□□ -0.36
PCNT-201ENST00000359568 ZHX1Q9UKY1 873 aaPredicted RBP12.79□□□□□ -0.36
PCNT-201ENST00000359568 BICD2Q8TD16 824 aa12.79□□□□□ -0.36
PCNT-201ENST00000359568 STK31Q9BXU1 1019 aa12.79□□□□□ -0.36
PCNT-201ENST00000359568 CCP110O43303 1012 aa12.79□□□□□ -0.36
PCNT-201ENST00000359568 PKD2Q13563 968 aa12.79□□□□□ -0.36
PCNT-201ENST00000359568 ZKSCAN2Q63HK3 967 aa12.79□□□□□ -0.36
PCNT-201ENST00000359568 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
PCNT-201ENST00000359568 KIAA0754O94854 1291 aa12.78□□□□□ -0.36
PCNT-201ENST00000359568 ANKRD45Q5TZF3 282 aa12.78□□□□□ -0.36
PCNT-201ENST00000359568 NAT10Q9H0A0 1025 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms