RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 RRP1P56182 461 aaKnown RBP15.91■□□□□ 0.14
COL20A1-201ENST00000358894 PDE3BQ13370 1112 aa15.91■□□□□ 0.14
COL20A1-201ENST00000358894 NUTM2DQ5VT03 806 aaPredicted RBP15.91■□□□□ 0.14
COL20A1-201ENST00000358894 THOC2Q8NI27 1593 aaKnown RBP15.91■□□□□ 0.14
COL20A1-201ENST00000358894 AKNAQ7Z591 1439 aa15.9■□□□□ 0.14
COL20A1-201ENST00000358894 STK26Q9P289 416 aa15.9■□□□□ 0.14
COL20A1-201ENST00000358894 POGKQ9P215 609 aa15.89■□□□□ 0.13
COL20A1-201ENST00000358894 ARID4BQ4LE39 1312 aaPredicted RBP15.89■□□□□ 0.13
COL20A1-201ENST00000358894 CFAP43Q8NDM7 1665 aa15.89■□□□□ 0.13
COL20A1-201ENST00000358894 GOLGA2Q08379 1002 aa15.88■□□□□ 0.13
COL20A1-201ENST00000358894 TCERG1O14776 1098 aaKnown RBP15.88■□□□□ 0.13
COL20A1-201ENST00000358894 PNISRQ8TF01 805 aaKnown RBP15.87■□□□□ 0.13
COL20A1-201ENST00000358894 TRAK1Q9UPV9 953 aa15.87■□□□□ 0.13
COL20A1-201ENST00000358894 FTSJ3Q8IY81 847 aaKnown RBP15.87■□□□□ 0.13
COL20A1-201ENST00000358894 AFAP1Q8N556 730 aa15.87■□□□□ 0.13
COL20A1-201ENST00000358894 CDCA7LQ96GN5 454 aa15.87■□□□□ 0.13
COL20A1-201ENST00000358894 UGGT2Q9NYU1 1516 aa15.87■□□□□ 0.13
COL20A1-201ENST00000358894 FANCIQ9NVI1 1328 aa15.87■□□□□ 0.13
COL20A1-201ENST00000358894 SRPK2P78362 688 aaKnown RBP15.87■□□□□ 0.13
COL20A1-201ENST00000358894 SYNJ2O15056 1496 aa15.86■□□□□ 0.13
COL20A1-201ENST00000358894 CAMSAP2Q08AD1 1489 aa15.86■□□□□ 0.13
COL20A1-201ENST00000358894 CTTNBP2Q8WZ74 1663 aa15.86■□□□□ 0.13
COL20A1-201ENST00000358894 HSP90AA1P07900 732 aaKnown RBP15.86■□□□□ 0.13
COL20A1-201ENST00000358894 IPO9Q96P70 1041 aaKnown RBP15.86■□□□□ 0.13
COL20A1-201ENST00000358894 NCOA1Q15788 1441 aa15.85■□□□□ 0.13
COL20A1-201ENST00000358894 ARHGEF11O15085 1522 aa15.85■□□□□ 0.13
COL20A1-201ENST00000358894 GRIN2AQ12879 1464 aa15.85■□□□□ 0.13
COL20A1-201ENST00000358894 RPRD2Q5VT52 1461 aaKnown RBP15.85■□□□□ 0.13
COL20A1-201ENST00000358894 MAPK8IP3Q9UPT6 1336 aa15.85■□□□□ 0.13
COL20A1-201ENST00000358894 CRBNQ96SW2 442 aa15.84■□□□□ 0.13
COL20A1-201ENST00000358894 ARHGAP5Q13017 1502 aa15.82■□□□□ 0.12
COL20A1-201ENST00000358894 EIF3AQ14152 1382 aaKnown RBP15.82■□□□□ 0.12
COL20A1-201ENST00000358894 U2AF1L5P0DN76 240 aaPredicted RBP15.82■□□□□ 0.12
COL20A1-201ENST00000358894 U2AF1Q01081 240 aaKnown RBP eCLIP15.82■□□□□ 0.12
COL20A1-201ENST00000358894 BRD4O60885 1362 aaPredicted RBP15.82■□□□□ 0.12
COL20A1-201ENST00000358894 RRP7AQ9Y3A4 280 aaKnown RBP15.81■□□□□ 0.12
COL20A1-201ENST00000358894 APAF1O14727 1248 aa15.81■□□□□ 0.12
COL20A1-201ENST00000358894 PDE4AP27815 886 aa15.8■□□□□ 0.12
COL20A1-201ENST00000358894 MLECQ14165 292 aa15.8■□□□□ 0.12
COL20A1-201ENST00000358894 ADAMTS8Q9UP79 889 aa15.79■□□□□ 0.12
COL20A1-201ENST00000358894 WASHC2CQ9Y4E1 1318 aa15.79■□□□□ 0.12
COL20A1-201ENST00000358894 BECN1Q14457 450 aa15.78■□□□□ 0.12
COL20A1-201ENST00000358894 CLUAP1Q96AJ1 413 aa15.78■□□□□ 0.12
COL20A1-201ENST00000358894 NAP1L5Q96NT1 182 aaPredicted RBP15.78■□□□□ 0.12
COL20A1-201ENST00000358894 MAGI1Q96QZ7 1491 aaPredicted RBP15.77■□□□□ 0.12
COL20A1-201ENST00000358894 NUP153P49790 1475 aaKnown RBP15.77■□□□□ 0.11
COL20A1-201ENST00000358894 BCL2L13Q9BXK5 485 aa15.75■□□□□ 0.11
COL20A1-201ENST00000358894 GPATCH8Q9UKJ3 1502 aaKnown RBP15.75■□□□□ 0.11
COL20A1-201ENST00000358894 CFAP70Q5T0N1 1121 aa15.75■□□□□ 0.11
COL20A1-201ENST00000358894 SMG6Q86US8 1419 aaKnown RBP15.73■□□□□ 0.11
COL20A1-201ENST00000358894 SLC4A3P48751 1232 aa15.72■□□□□ 0.11
COL20A1-201ENST00000358894 CENPJQ9HC77 1338 aaPredicted RBP15.72■□□□□ 0.11
COL20A1-201ENST00000358894 PLEKHG5O94827 1062 aa15.72■□□□□ 0.11
COL20A1-201ENST00000358894 TCOF1Q13428 1488 aaKnown RBP15.72■□□□□ 0.11
COL20A1-201ENST00000358894 MYH16Q9H6N6 1097 aa15.72■□□□□ 0.11
COL20A1-201ENST00000358894 MAGI3Q5TCQ9 1506 aa15.7■□□□□ 0.1
COL20A1-201ENST00000358894 MSH5O43196 834 aa15.7■□□□□ 0.1
COL20A1-201ENST00000358894 PPP2R1AP30153 589 aa15.7■□□□□ 0.1
COL20A1-201ENST00000358894 SOX12O15370 315 aa15.69■□□□□ 0.1
COL20A1-201ENST00000358894 TMEM132EQ6IEE7 984 aa15.69■□□□□ 0.1
COL20A1-201ENST00000358894 COG6Q9Y2V7 657 aa15.69■□□□□ 0.1
COL20A1-201ENST00000358894 WDR62O43379 1518 aa15.69■□□□□ 0.1
COL20A1-201ENST00000358894 SPRYD3Q8NCJ5 442 aa15.68■□□□□ 0.1
COL20A1-201ENST00000358894 CCDC141Q6ZP82 1450 aa15.68■□□□□ 0.1
COL20A1-201ENST00000358894 KIF21AQ7Z4S6 1674 aa15.68■□□□□ 0.1
COL20A1-201ENST00000358894 PAK3O75914 559 aaPredicted RBP15.68■□□□□ 0.1
COL20A1-201ENST00000358894 RAPGEF6Q8TEU7 1601 aa15.68■□□□□ 0.1
COL20A1-201ENST00000358894 CENPQQ7L2Z9 268 aaPredicted RBP15.67■□□□□ 0.1
COL20A1-201ENST00000358894 ANP32BQ92688 251 aaKnown RBP15.67■□□□□ 0.1
COL20A1-201ENST00000358894 ADAMTS12P58397 1594 aa15.67■□□□□ 0.1
COL20A1-201ENST00000358894 ABCA5Q8WWZ7 1642 aa15.66■□□□□ 0.1
COL20A1-201ENST00000358894 E9PSI1 815 aa15.66■□□□□ 0.1
COL20A1-201ENST00000358894 SAMD9Q5K651 1589 aa15.66■□□□□ 0.1
COL20A1-201ENST00000358894 SLKQ9H2G2 1235 aaPredicted RBP15.66■□□□□ 0.1
COL20A1-201ENST00000358894 ERBINQ96RT1 1412 aa15.65■□□□□ 0.1
COL20A1-201ENST00000358894 HDGFL2Q7Z4V5 671 aaPredicted RBP15.65■□□□□ 0.1
COL20A1-201ENST00000358894 C14orf37Q86TY3 774 aa15.65■□□□□ 0.1
COL20A1-201ENST00000358894 ITPRIPQ8IWB1 547 aa15.65■□□□□ 0.1
COL20A1-201ENST00000358894 SMC4Q9NTJ3 1288 aa15.65■□□□□ 0.1
COL20A1-201ENST00000358894 KIF14Q15058 1648 aa15.65■□□□□ 0.1
COL20A1-201ENST00000358894 MS4A1P11836 297 aa15.64■□□□□ 0.09
COL20A1-201ENST00000358894 IL27Q8NEV9 243 aa15.64■□□□□ 0.09
COL20A1-201ENST00000358894 ATP10BO94823 1461 aa15.63■□□□□ 0.09
COL20A1-201ENST00000358894 SCAPERQ9BY12 1400 aa15.63■□□□□ 0.09
COL20A1-201ENST00000358894 VSIG10Q8N0Z9 540 aa15.63■□□□□ 0.09
COL20A1-201ENST00000358894 KIAA0556O60303 1618 aa15.63■□□□□ 0.09
COL20A1-201ENST00000358894 ZBTB7CA1YPR0 619 aa15.62■□□□□ 0.09
COL20A1-201ENST00000358894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.62■□□□□ 0.09
COL20A1-201ENST00000358894 SKAP1Q86WV1 359 aa15.62■□□□□ 0.09
COL20A1-201ENST00000358894 MINK1Q8N4C8 1332 aaPredicted RBP15.62■□□□□ 0.09
COL20A1-201ENST00000358894 CGNL1Q0VF96 1302 aa15.62■□□□□ 0.09
COL20A1-201ENST00000358894 FAM161AQ3B820 660 aa15.61■□□□□ 0.09
COL20A1-201ENST00000358894 RWDD1Q9H446 243 aaPredicted RBP15.61■□□□□ 0.09
COL20A1-201ENST00000358894 DISP1Q96F81 1524 aa15.61■□□□□ 0.09
COL20A1-201ENST00000358894 PLEKHH2Q8IVE3 1493 aa15.61■□□□□ 0.09
COL20A1-201ENST00000358894 VGFO15240 615 aaPredicted RBP15.61■□□□□ 0.09
COL20A1-201ENST00000358894 TERF2IPQ9NYB0 399 aa15.61■□□□□ 0.09
COL20A1-201ENST00000358894 STAC3Q96MF2 364 aa15.6■□□□□ 0.09
COL20A1-201ENST00000358894 PNNQ9H307 717 aaKnown RBP15.6■□□□□ 0.09
COL20A1-201ENST00000358894 TRIM44Q96DX7 344 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms