RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 POLA1P09884 1462 aaPredicted RBP18.61■□□□□ 0.57
SLC6A20-202ENST00000358525 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
SLC6A20-202ENST00000358525 RTF1Q92541 710 aaKnown RBP18.61■□□□□ 0.57
SLC6A20-202ENST00000358525 APBB1O00213 710 aa18.6■□□□□ 0.57
SLC6A20-202ENST00000358525 PMFBP1Q8TBY8 1022 aa18.59■□□□□ 0.57
SLC6A20-202ENST00000358525 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
SLC6A20-202ENST00000358525 CALD1Q05682 793 aaKnown RBP18.58■□□□□ 0.56
SLC6A20-202ENST00000358525 GLIPR1L2Q4G1C9 344 aa18.57■□□□□ 0.56
SLC6A20-202ENST00000358525 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
SLC6A20-202ENST00000358525 SLKQ9H2G2 1235 aaPredicted RBP18.56■□□□□ 0.56
SLC6A20-202ENST00000358525 EHBP1L1Q8N3D4 1523 aa18.56■□□□□ 0.56
SLC6A20-202ENST00000358525 PTMAP06454 111 aaKnown RBP18.56■□□□□ 0.56
SLC6A20-202ENST00000358525 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.56■□□□□ 0.56
SLC6A20-202ENST00000358525 CRBNQ96SW2 442 aa18.55■□□□□ 0.56
SLC6A20-202ENST00000358525 HFM1A2PYH4 1435 aa18.53■□□□□ 0.56
SLC6A20-202ENST00000358525 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
SLC6A20-202ENST00000358525 PAK3O75914 559 aaPredicted RBP18.52■□□□□ 0.56
SLC6A20-202ENST00000358525 BCL2L13Q9BXK5 485 aa18.52■□□□□ 0.55
SLC6A20-202ENST00000358525 APAF1O14727 1248 aa18.52■□□□□ 0.55
SLC6A20-202ENST00000358525 MFAP1P55081 439 aaKnown RBP18.52■□□□□ 0.55
SLC6A20-202ENST00000358525 PDE4AP27815 886 aa18.51■□□□□ 0.55
SLC6A20-202ENST00000358525 KCNJ4P48050 445 aa18.51■□□□□ 0.55
SLC6A20-202ENST00000358525 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
SLC6A20-202ENST00000358525 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
SLC6A20-202ENST00000358525 E9PSI1 815 aa18.49■□□□□ 0.55
SLC6A20-202ENST00000358525 NBPF8Q3BBV2 869 aa18.49■□□□□ 0.55
SLC6A20-202ENST00000358525 CGNL1Q0VF96 1302 aa18.49■□□□□ 0.55
SLC6A20-202ENST00000358525 CENPQQ7L2Z9 268 aaPredicted RBP18.49■□□□□ 0.55
SLC6A20-202ENST00000358525 VGFO15240 615 aaPredicted RBP18.48■□□□□ 0.55
SLC6A20-202ENST00000358525 MIA2Q96PC5 1412 aa18.48■□□□□ 0.55
SLC6A20-202ENST00000358525 EVC2Q86UK5 1308 aa18.48■□□□□ 0.55
SLC6A20-202ENST00000358525 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
SLC6A20-202ENST00000358525 NUTM2FA1L443 756 aa18.47■□□□□ 0.55
SLC6A20-202ENST00000358525 PRG4Q92954 1404 aaPredicted RBP18.47■□□□□ 0.55
SLC6A20-202ENST00000358525 MCCP23508 829 aa18.47■□□□□ 0.55
SLC6A20-202ENST00000358525 PCF11O94913 1555 aaKnown RBP18.46■□□□□ 0.55
SLC6A20-202ENST00000358525 NAP1L5Q96NT1 182 aaPredicted RBP18.45■□□□□ 0.54
SLC6A20-202ENST00000358525 HECW1Q76N89 1606 aa18.45■□□□□ 0.54
SLC6A20-202ENST00000358525 CFAP44Q96MT7 982 aa18.45■□□□□ 0.54
SLC6A20-202ENST00000358525 PLCB2Q00722 1185 aa18.45■□□□□ 0.54
SLC6A20-202ENST00000358525 MINK1Q8N4C8 1332 aaPredicted RBP18.45■□□□□ 0.54
SLC6A20-202ENST00000358525 L1TD1Q5T7N2 865 aaKnown RBP18.45■□□□□ 0.54
SLC6A20-202ENST00000358525 ARHGAP5Q13017 1502 aa18.45■□□□□ 0.54
SLC6A20-202ENST00000358525 FGD1P98174 961 aa18.44■□□□□ 0.54
SLC6A20-202ENST00000358525 COG6Q9Y2V7 657 aa18.44■□□□□ 0.54
SLC6A20-202ENST00000358525 ZRSR1Q15695 479 aaKnown RBP18.43■□□□□ 0.54
SLC6A20-202ENST00000358525 DNTTIP2Q5QJE6 756 aaKnown RBP18.43■□□□□ 0.54
SLC6A20-202ENST00000358525 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
SLC6A20-202ENST00000358525 SUPT6HQ7KZ85 1726 aaKnown RBP18.43■□□□□ 0.54
SLC6A20-202ENST00000358525 GZF1Q9H116 711 aaPredicted RBP18.43■□□□□ 0.54
SLC6A20-202ENST00000358525 IFT140Q96RY7 1462 aa18.42■□□□□ 0.54
SLC6A20-202ENST00000358525 FAM161AQ3B820 660 aa18.42■□□□□ 0.54
SLC6A20-202ENST00000358525 SYNJ2O15056 1496 aa18.42■□□□□ 0.54
SLC6A20-202ENST00000358525 KIAA1107Q9UPP5 1409 aa18.42■□□□□ 0.54
SLC6A20-202ENST00000358525 FANCIQ9NVI1 1328 aa18.41■□□□□ 0.54
SLC6A20-202ENST00000358525 SLC4A3P48751 1232 aa18.41■□□□□ 0.54
SLC6A20-202ENST00000358525 ABCA10Q8WWZ4 1543 aa18.41■□□□□ 0.54
SLC6A20-202ENST00000358525 DAPK1P53355 1430 aa18.41■□□□□ 0.54
SLC6A20-202ENST00000358525 STK31Q9BXU1 1019 aa18.41■□□□□ 0.54
SLC6A20-202ENST00000358525 C9orf84Q5VXU9 1444 aa18.41■□□□□ 0.54
SLC6A20-202ENST00000358525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.41■□□□□ 0.54
SLC6A20-202ENST00000358525 CDK13Q14004 1512 aaKnown RBP18.41■□□□□ 0.54
SLC6A20-202ENST00000358525 ELL2O00472 640 aaPredicted RBP18.4■□□□□ 0.54
SLC6A20-202ENST00000358525 BRD4O60885 1362 aaPredicted RBP18.4■□□□□ 0.54
SLC6A20-202ENST00000358525 LMOD3Q0VAK6 560 aa18.4■□□□□ 0.54
SLC6A20-202ENST00000358525 AFAP1Q8N556 730 aa18.4■□□□□ 0.54
SLC6A20-202ENST00000358525 TROQ12816 1431 aaPredicted RBP18.4■□□□□ 0.54
SLC6A20-202ENST00000358525 NAIPQ13075 1403 aa18.4■□□□□ 0.54
SLC6A20-202ENST00000358525 NBPF1Q3BBV0 1214 aa18.4■□□□□ 0.54
SLC6A20-202ENST00000358525 NGDNQ8NEJ9 315 aaKnown RBP18.4■□□□□ 0.54
SLC6A20-202ENST00000358525 NAP1L2Q9ULW6 460 aaPredicted RBP18.4■□□□□ 0.54
SLC6A20-202ENST00000358525 SNAPC4Q5SXM2 1469 aa18.4■□□□□ 0.54
SLC6A20-202ENST00000358525 SLC4A10Q6U841 1118 aa18.4■□□□□ 0.54
SLC6A20-202ENST00000358525 ZKSCAN2Q63HK3 967 aa18.39■□□□□ 0.53
SLC6A20-202ENST00000358525 EID1Q9Y6B2 187 aa18.38■□□□□ 0.53
SLC6A20-202ENST00000358525 GBP4Q96PP9 640 aa18.38■□□□□ 0.53
SLC6A20-202ENST00000358525 EPRSP07814 1512 aaKnown RBP18.37■□□□□ 0.53
SLC6A20-202ENST00000358525 AMPHP49418 695 aa18.36■□□□□ 0.53
SLC6A20-202ENST00000358525 ADAMTS8Q9UP79 889 aa18.36■□□□□ 0.53
SLC6A20-202ENST00000358525 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
SLC6A20-202ENST00000358525 CCDC184Q52MB2 194 aa18.36■□□□□ 0.53
SLC6A20-202ENST00000358525 LTV1Q96GA3 475 aaPredicted RBP18.35■□□□□ 0.53
SLC6A20-202ENST00000358525 CDCA7LQ96GN5 454 aa18.35■□□□□ 0.53
SLC6A20-202ENST00000358525 CYB5RLQ6IPT4 315 aa18.35■□□□□ 0.53
SLC6A20-202ENST00000358525 STAC3Q96MF2 364 aa18.35■□□□□ 0.53
SLC6A20-202ENST00000358525 OSCARQ8IYS5 282 aa18.35■□□□□ 0.53
SLC6A20-202ENST00000358525 COG3Q96JB2 828 aa18.34■□□□□ 0.53
SLC6A20-202ENST00000358525 KIAA1211Q6ZU35 1233 aa18.34■□□□□ 0.53
SLC6A20-202ENST00000358525 FOXD4L1Q9NU39 408 aa18.34■□□□□ 0.53
SLC6A20-202ENST00000358525 HMMRO75330 724 aa18.33■□□□□ 0.53
SLC6A20-202ENST00000358525 TMEM132EQ6IEE7 984 aa18.33■□□□□ 0.53
SLC6A20-202ENST00000358525 CFAP70Q5T0N1 1121 aa18.33■□□□□ 0.52
SLC6A20-202ENST00000358525 RUNDC1Q96C34 613 aa18.33■□□□□ 0.52
SLC6A20-202ENST00000358525 GOLGA6L4A6NEF3 574 aa18.32■□□□□ 0.52
SLC6A20-202ENST00000358525 DIAPH1O60610 1272 aaKnown RBP18.32■□□□□ 0.52
SLC6A20-202ENST00000358525 TRIM6-TRIM34B2RNG4 842 aa18.31■□□□□ 0.52
SLC6A20-202ENST00000358525 CSB-PGBD3P0DP91 1061 aa18.31■□□□□ 0.52
SLC6A20-202ENST00000358525 NGEFQ8N5V2 710 aa18.3■□□□□ 0.52
SLC6A20-202ENST00000358525 RIPK4P57078 832 aa18.3■□□□□ 0.52
SLC6A20-202ENST00000358525 ANKRD45Q5TZF3 282 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 311.2 ms