RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 DNTTIP2Q5QJE6 756 aaKnown RBP13.83□□□□□ -0.19
FN1-205ENST00000357867 GLIPR1L2Q4G1C9 344 aa13.83□□□□□ -0.19
FN1-205ENST00000357867 SUPT6HQ7KZ85 1726 aaKnown RBP13.83□□□□□ -0.2
FN1-205ENST00000357867 GRIN2BQ13224 1484 aa13.83□□□□□ -0.2
FN1-205ENST00000357867 KIAA2012Q0VF49 1180 aa13.83□□□□□ -0.2
FN1-205ENST00000357867 TRAK1Q9UPV9 953 aa13.83□□□□□ -0.2
FN1-205ENST00000357867 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.2
FN1-205ENST00000357867 CCDC34Q96HJ3 373 aa13.82□□□□□ -0.2
FN1-205ENST00000357867 SYNJ2O15056 1496 aa13.81□□□□□ -0.2
FN1-205ENST00000357867 CGNL1Q0VF96 1302 aa13.81□□□□□ -0.2
FN1-205ENST00000357867 TTC5Q8N0Z6 440 aa13.81□□□□□ -0.2
FN1-205ENST00000357867 WASHC2AQ641Q2 1341 aa13.81□□□□□ -0.2
FN1-205ENST00000357867 TRIM34Q9BYJ4 488 aa13.8□□□□□ -0.2
FN1-205ENST00000357867 CHAF1AQ13111 956 aaPredicted RBP13.8□□□□□ -0.2
FN1-205ENST00000357867 NOL10Q9BSC4 688 aaKnown RBP13.8□□□□□ -0.2
FN1-205ENST00000357867 KIF21BO75037 1637 aa13.8□□□□□ -0.2
FN1-205ENST00000357867 ITPRIPQ8IWB1 547 aa13.8□□□□□ -0.2
FN1-205ENST00000357867 HSPA5P11021 654 aaKnown RBP13.79□□□□□ -0.2
FN1-205ENST00000357867 HTATSF1O43719 755 aaKnown RBP13.79□□□□□ -0.2
FN1-205ENST00000357867 PLCB2Q00722 1185 aa13.79□□□□□ -0.2
FN1-205ENST00000357867 SYTL4Q96C24 671 aaPredicted RBP13.79□□□□□ -0.2
FN1-205ENST00000357867 APBB1O00213 710 aa13.79□□□□□ -0.2
FN1-205ENST00000357867 PHLDB1Q86UU1 1377 aa13.78□□□□□ -0.2
FN1-205ENST00000357867 LRRFIP1Q32MZ4 808 aaKnown RBP13.78□□□□□ -0.2
FN1-205ENST00000357867 AMOTL1Q8IY63 956 aa13.78□□□□□ -0.2
FN1-205ENST00000357867 TEFQ10587 303 aa13.78□□□□□ -0.2
FN1-205ENST00000357867 SF3B2Q13435 895 aaKnown RBP13.78□□□□□ -0.2
FN1-205ENST00000357867 PPP4R2Q9NY27 417 aa13.77□□□□□ -0.2
FN1-205ENST00000357867 SLC4A10Q6U841 1118 aa13.77□□□□□ -0.21
FN1-205ENST00000357867 SMC4Q9NTJ3 1288 aa13.77□□□□□ -0.21
FN1-205ENST00000357867 HECW1Q76N89 1606 aa13.77□□□□□ -0.21
FN1-205ENST00000357867 KANK4Q5T7N3 995 aaPredicted RBP13.77□□□□□ -0.21
FN1-205ENST00000357867 TRIM6-TRIM34B2RNG4 842 aa13.76□□□□□ -0.21
FN1-205ENST00000357867 MIA2Q96PC5 1412 aa13.76□□□□□ -0.21
FN1-205ENST00000357867 NEXNQ0ZGT2 675 aa13.76□□□□□ -0.21
FN1-205ENST00000357867 POGZQ7Z3K3 1410 aa13.75□□□□□ -0.21
FN1-205ENST00000357867 MYOM3Q5VTT5 1437 aa13.75□□□□□ -0.21
FN1-205ENST00000357867 RWDD1Q9H446 243 aaPredicted RBP13.75□□□□□ -0.21
FN1-205ENST00000357867 LAMC3Q9Y6N6 1575 aa13.75□□□□□ -0.21
FN1-205ENST00000357867 IFT140Q96RY7 1462 aa13.75□□□□□ -0.21
FN1-205ENST00000357867 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
FN1-205ENST00000357867 PMFBP1Q8TBY8 1022 aa13.74□□□□□ -0.21
FN1-205ENST00000357867 CTDP1Q9Y5B0 961 aaPredicted RBP13.74□□□□□ -0.21
FN1-205ENST00000357867 CUL7Q14999 1698 aa13.73□□□□□ -0.21
FN1-205ENST00000357867 VPS37DQ86XT2 251 aa13.73□□□□□ -0.21
FN1-205ENST00000357867 DHX57Q6P158 1386 aaKnown RBP13.72□□□□□ -0.21
FN1-205ENST00000357867 HSP90B1P14625 803 aaKnown RBP13.72□□□□□ -0.21
FN1-205ENST00000357867 VPS53Q5VIR6 699 aa13.72□□□□□ -0.21
FN1-205ENST00000357867 CCER2I3L3R5 266 aa13.72□□□□□ -0.21
FN1-205ENST00000357867 TCEAL9Q9UHQ7 104 aa13.72□□□□□ -0.21
FN1-205ENST00000357867 NCAPD3P42695 1498 aa13.72□□□□□ -0.21
FN1-205ENST00000357867 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.219e-12■■■■■ 26.9
FN1-205ENST00000357867 KLHL34Q8N239 644 aa13.71□□□□□ -0.21
FN1-205ENST00000357867 KIF15Q9NS87 1388 aa13.71□□□□□ -0.21
FN1-205ENST00000357867 DRC7Q8IY82 874 aa13.71□□□□□ -0.22
FN1-205ENST00000357867 MINK1Q8N4C8 1332 aaPredicted RBP13.7□□□□□ -0.22
FN1-205ENST00000357867 RRBP1Q9P2E9 1410 aaKnown RBP13.7□□□□□ -0.22
FN1-205ENST00000357867 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
FN1-205ENST00000357867 CWC22Q9HCG8 908 aaKnown RBP13.7□□□□□ -0.22
FN1-205ENST00000357867 MARCH6O60337 910 aa13.7□□□□□ -0.22
FN1-205ENST00000357867 DDX58O95786 925 aaKnown RBP13.7□□□□□ -0.22
FN1-205ENST00000357867 PTMSP20962 102 aa13.7□□□□□ -0.22
FN1-205ENST00000357867 ANO8Q9HCE9 1232 aaPredicted RBP13.7□□□□□ -0.22
FN1-205ENST00000357867 KIF3AQ9Y496 699 aa13.7□□□□□ -0.22
FN1-205ENST00000357867 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
FN1-205ENST00000357867 RASSF8Q8NHQ8 419 aa13.69□□□□□ -0.22
FN1-205ENST00000357867 DNMBPQ6XZF7 1577 aa13.69□□□□□ -0.22
FN1-205ENST00000357867 CHMP4CQ96CF2 233 aa13.69□□□□□ -0.22
FN1-205ENST00000357867 PLEKHH2Q8IVE3 1493 aa13.68□□□□□ -0.22
FN1-205ENST00000357867 HMGB2P26583 209 aaKnown RBP13.68□□□□□ -0.22
FN1-205ENST00000357867 TPM4P67936 248 aa13.68□□□□□ -0.22
FN1-205ENST00000357867 B4GALNT3Q6L9W6 998 aa13.68□□□□□ -0.22
FN1-205ENST00000357867 RAPGEF4Q8WZA2 1011 aa13.68□□□□□ -0.22
FN1-205ENST00000357867 RCAN3Q9UKA8 241 aa13.68□□□□□ -0.22
FN1-205ENST00000357867 STAC3Q96MF2 364 aa13.67□□□□□ -0.22
FN1-205ENST00000357867 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.67□□□□□ -0.22
FN1-205ENST00000357867 TOMM22Q9NS69 142 aa13.67□□□□□ -0.22
FN1-205ENST00000357867 SMG6Q86US8 1419 aaKnown RBP13.67□□□□□ -0.22
FN1-205ENST00000357867 CSPP1Q1MSJ5 1256 aa13.67□□□□□ -0.22
FN1-205ENST00000357867 NLRP13Q86W25 1043 aa13.66□□□□□ -0.22
FN1-205ENST00000357867 C9orf78Q9NZ63 289 aaPredicted RBP13.66□□□□□ -0.22
FN1-205ENST00000357867 THEMISQ8N1K5 641 aaPredicted RBP13.66□□□□□ -0.22
FN1-205ENST00000357867 PRG4Q92954 1404 aaPredicted RBP13.66□□□□□ -0.22
FN1-205ENST00000357867 RBM33Q96EV2 1170 aaKnown RBP13.66□□□□□ -0.22
FN1-205ENST00000357867 FYCO1Q9BQS8 1478 aa13.65□□□□□ -0.22
FN1-205ENST00000357867 EFCAB5A4FU69 1503 aa13.65□□□□□ -0.22
FN1-205ENST00000357867 AKAP17AQ02040 695 aaKnown RBP13.65□□□□□ -0.22
FN1-205ENST00000357867 L3MBTL2Q969R5 705 aa13.65□□□□□ -0.22
FN1-205ENST00000357867 PRM3Q9NNZ6 103 aa13.65□□□□□ -0.22
FN1-205ENST00000357867 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
FN1-205ENST00000357867 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
FN1-205ENST00000357867 NGEFQ8N5V2 710 aa13.64□□□□□ -0.23
FN1-205ENST00000357867 SYAP1Q96A49 352 aaPredicted RBP13.63□□□□□ -0.23
FN1-205ENST00000357867 SYNJ1O43426 1573 aa13.63□□□□□ -0.23
FN1-205ENST00000357867 ROCK1Q13464 1354 aa13.63□□□□□ -0.23
FN1-205ENST00000357867 CCDC146Q8IYE0 955 aa13.62□□□□□ -0.23
FN1-205ENST00000357867 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
FN1-205ENST00000357867 KRI1Q8N9T8 703 aaKnown RBP13.62□□□□□ -0.23
FN1-205ENST00000357867 KIF14Q15058 1648 aa13.62□□□□□ -0.23
FN1-205ENST00000357867 SYNE3Q6ZMZ3 975 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms