RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 ZMYM4Q5VZL5 1548 aa16.13■□□□□ 0.17
SMARCAL1-201ENST00000357276 RCAN3Q9UKA8 241 aa16.12■□□□□ 0.17
SMARCAL1-201ENST00000357276 PDE3BQ13370 1112 aa16.11■□□□□ 0.17
SMARCAL1-201ENST00000357276 RALBP1Q15311 655 aa16.11■□□□□ 0.17
SMARCAL1-201ENST00000357276 PLB1Q6P1J6 1458 aa16.11■□□□□ 0.17
SMARCAL1-201ENST00000357276 INSRP06213 1382 aa16.11■□□□□ 0.17
SMARCAL1-201ENST00000357276 LAS1LQ9Y4W2 734 aaKnown RBP16.11■□□□□ 0.17
SMARCAL1-201ENST00000357276 NPM2Q86SE8 214 aaKnown RBP16.09■□□□□ 0.17
SMARCAL1-201ENST00000357276 PTPRGP23470 1445 aa16.09■□□□□ 0.17
SMARCAL1-201ENST00000357276 UHRF1BP1LA0JNW5 1464 aa16.08■□□□□ 0.16
SMARCAL1-201ENST00000357276 PARD3Q8TEW0 1356 aa16.08■□□□□ 0.16
SMARCAL1-201ENST00000357276 ITSN2Q9NZM3 1697 aa16.07■□□□□ 0.16
SMARCAL1-201ENST00000357276 TROQ12816 1431 aaPredicted RBP16.07■□□□□ 0.16
SMARCAL1-201ENST00000357276 ZNF644Q9H582 1327 aaPredicted RBP16.07■□□□□ 0.16
SMARCAL1-201ENST00000357276 ABCC2Q92887 1545 aa16.06■□□□□ 0.16
SMARCAL1-201ENST00000357276 DDRGK1Q96HY6 314 aa16.06■□□□□ 0.16
SMARCAL1-201ENST00000357276 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
SMARCAL1-201ENST00000357276 ERCC6L2Q5T890 1561 aa16.05■□□□□ 0.16
SMARCAL1-201ENST00000357276 RTN4Q9NQC3 1192 aaKnown RBP16.05■□□□□ 0.16
SMARCAL1-201ENST00000357276 KDM5DQ9BY66 1539 aa16.05■□□□□ 0.16
SMARCAL1-201ENST00000357276 BLMP54132 1417 aaPredicted RBP16.04■□□□□ 0.16
SMARCAL1-201ENST00000357276 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
SMARCAL1-201ENST00000357276 GSE1Q14687 1217 aa16.04■□□□□ 0.16
SMARCAL1-201ENST00000357276 ATP10BO94823 1461 aa16.04■□□□□ 0.16
SMARCAL1-201ENST00000357276 NLRP13Q86W25 1043 aa16.01■□□□□ 0.15
SMARCAL1-201ENST00000357276 CNGB1Q14028 1251 aaPredicted RBP16■□□□□ 0.15
SMARCAL1-201ENST00000357276 KDM2BQ8NHM5 1336 aa16■□□□□ 0.15
SMARCAL1-201ENST00000357276 POLR3GLQ9BT43 218 aa16■□□□□ 0.15
SMARCAL1-201ENST00000357276 PLEKHH2Q8IVE3 1493 aa16■□□□□ 0.15
SMARCAL1-201ENST00000357276 NFKBIBQ15653 356 aa16■□□□□ 0.15
SMARCAL1-201ENST00000357276 PKD2Q13563 968 aa15.99■□□□□ 0.15
SMARCAL1-201ENST00000357276 TRPM1Q7Z4N2 1603 aa15.99■□□□□ 0.15
SMARCAL1-201ENST00000357276 BRPF3Q9ULD4 1205 aa15.99■□□□□ 0.15
SMARCAL1-201ENST00000357276 GPATCH8Q9UKJ3 1502 aaKnown RBP15.98■□□□□ 0.15
SMARCAL1-201ENST00000357276 CARD11Q9BXL7 1154 aa15.98■□□□□ 0.15
SMARCAL1-201ENST00000357276 ST20-MTHFSA0A0A6YYL1 179 aa15.98■□□□□ 0.15
SMARCAL1-201ENST00000357276 PER1O15534 1290 aaPredicted RBP15.97■□□□□ 0.15
SMARCAL1-201ENST00000357276 LAMC1P11047 1609 aa15.97■□□□□ 0.15
SMARCAL1-201ENST00000357276 UBE2Q2Q8WVN8 375 aa15.97■□□□□ 0.15
SMARCAL1-201ENST00000357276 CDCA7LQ96GN5 454 aa15.97■□□□□ 0.15
SMARCAL1-201ENST00000357276 ABCC10Q5T3U5 1492 aa15.96■□□□□ 0.15
SMARCAL1-201ENST00000357276 CDC42BPAQ5VT25 1732 aa15.96■□□□□ 0.15
SMARCAL1-201ENST00000357276 ZNF326Q5BKZ1 582 aaKnown RBP15.96■□□□□ 0.15
SMARCAL1-201ENST00000357276 SHANK2Q9UPX8 1470 aa15.95■□□□□ 0.14
SMARCAL1-201ENST00000357276 ZCCHC11Q5TAX3 1644 aaKnown RBP15.95■□□□□ 0.14
SMARCAL1-201ENST00000357276 ANKRD50Q9ULJ7 1429 aa15.95■□□□□ 0.14
SMARCAL1-201ENST00000357276 CRBNQ96SW2 442 aa15.95■□□□□ 0.14
SMARCAL1-201ENST00000357276 VIRMAQ69YN4 1812 aaKnown RBP15.94■□□□□ 0.14
SMARCAL1-201ENST00000357276 FRAT1Q92837 279 aaPredicted RBP15.94■□□□□ 0.14
SMARCAL1-201ENST00000357276 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.94■□□□□ 0.14
SMARCAL1-201ENST00000357276 ANKRD30AQ9BXX3 1397 aa15.94■□□□□ 0.14
SMARCAL1-201ENST00000357276 PLIN1O60240 522 aa15.92■□□□□ 0.14
SMARCAL1-201ENST00000357276 SKAP1Q86WV1 359 aa15.92■□□□□ 0.14
SMARCAL1-201ENST00000357276 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
SMARCAL1-201ENST00000357276 COL17A1Q9UMD9 1497 aaPredicted RBP15.91■□□□□ 0.14
SMARCAL1-201ENST00000357276 PREX2Q70Z35 1606 aa15.91■□□□□ 0.14
SMARCAL1-201ENST00000357276 C8orf34Q49A92 452 aa15.91■□□□□ 0.14
SMARCAL1-201ENST00000357276 PLEKHD1A6NEE1 506 aa15.9■□□□□ 0.14
SMARCAL1-201ENST00000357276 GPRASP1Q5JY77 1395 aa15.9■□□□□ 0.14
SMARCAL1-201ENST00000357276 ARID3CA6NKF2 412 aa15.9■□□□□ 0.14
SMARCAL1-201ENST00000357276 CENPQQ7L2Z9 268 aaPredicted RBP15.89■□□□□ 0.13
SMARCAL1-201ENST00000357276 PRAG1Q86YV5 1406 aa15.89■□□□□ 0.13
SMARCAL1-201ENST00000357276 PRDM15P57071 1507 aaPredicted RBP15.89■□□□□ 0.13
SMARCAL1-201ENST00000357276 CFDP1Q9UEE9 299 aaPredicted RBP15.88■□□□□ 0.13
SMARCAL1-201ENST00000357276 FAM161AQ3B820 660 aa15.88■□□□□ 0.13
SMARCAL1-201ENST00000357276 C20orf194Q5TEA3 1177 aa15.87■□□□□ 0.13
SMARCAL1-201ENST00000357276 CDC42BPBQ9Y5S2 1711 aa15.87■□□□□ 0.13
SMARCAL1-201ENST00000357276 NUP155O75694 1391 aa15.87■□□□□ 0.13
SMARCAL1-201ENST00000357276 MYO5CQ9NQX4 1742 aa15.86■□□□□ 0.13
SMARCAL1-201ENST00000357276 SLC4A3P48751 1232 aa15.85■□□□□ 0.13
SMARCAL1-201ENST00000357276 ARHGEF5Q12774 1597 aa15.85■□□□□ 0.13
SMARCAL1-201ENST00000357276 FAM43AQ8N2R8 423 aa15.85■□□□□ 0.13
SMARCAL1-201ENST00000357276 C9orf84Q5VXU9 1444 aa15.84■□□□□ 0.13
SMARCAL1-201ENST00000357276 ZNF521Q96K83 1311 aa15.84■□□□□ 0.13
SMARCAL1-201ENST00000357276 ARAP3Q8WWN8 1544 aa15.84■□□□□ 0.13
SMARCAL1-201ENST00000357276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.83■□□□□ 0.12
SMARCAL1-201ENST00000357276 DCAF11Q8TEB1 546 aa15.83■□□□□ 0.12
SMARCAL1-201ENST00000357276 TTC37Q6PGP7 1564 aa15.81■□□□□ 0.12
SMARCAL1-201ENST00000357276 FRAT2O75474 233 aaPredicted RBP15.81■□□□□ 0.12
SMARCAL1-201ENST00000357276 TESK2Q96S53 571 aa15.81■□□□□ 0.12
SMARCAL1-201ENST00000357276 DUSP27Q5VZP5 1158 aa15.81■□□□□ 0.12
SMARCAL1-201ENST00000357276 DISP3Q9P2K9 1392 aa15.8■□□□□ 0.12
SMARCAL1-201ENST00000357276 FAM135AQ9P2D6 1515 aa15.8■□□□□ 0.12
SMARCAL1-201ENST00000357276 RSPH6AQ9H0K4 717 aa15.8■□□□□ 0.12
SMARCAL1-201ENST00000357276 KDM2AQ9Y2K7 1162 aa15.79■□□□□ 0.12
SMARCAL1-201ENST00000357276 PLEKHH1Q9ULM0 1364 aa15.79■□□□□ 0.12
SMARCAL1-201ENST00000357276 RNF17Q9BXT8 1623 aaKnown RBP15.79■□□□□ 0.12
SMARCAL1-201ENST00000357276 EIF2AK4Q9P2K8 1649 aaKnown RBP15.79■□□□□ 0.12
SMARCAL1-201ENST00000357276 DAXXQ9UER7 740 aaPredicted RBP15.78■□□□□ 0.12
SMARCAL1-201ENST00000357276 SAMD9LQ8IVG5 1584 aa15.78■□□□□ 0.12
SMARCAL1-201ENST00000357276 A2MP01023 1474 aa15.78■□□□□ 0.12
SMARCAL1-201ENST00000357276 USP19O94966 1318 aa15.77■□□□□ 0.12
SMARCAL1-201ENST00000357276 ABCA9Q8IUA7 1624 aa15.77■□□□□ 0.12
SMARCAL1-201ENST00000357276 ERBINQ96RT1 1412 aa15.77■□□□□ 0.11
SMARCAL1-201ENST00000357276 MAST1Q9Y2H9 1570 aa15.77■□□□□ 0.11
SMARCAL1-201ENST00000357276 EIF3AQ14152 1382 aaKnown RBP15.76■□□□□ 0.11
SMARCAL1-201ENST00000357276 WDR7Q9Y4E6 1490 aa15.76■□□□□ 0.11
SMARCAL1-201ENST00000357276 TRMT2AQ8IZ69 625 aaKnown RBP15.76■□□□□ 0.11
SMARCAL1-201ENST00000357276 UNC13BO14795 1591 aa15.76■□□□□ 0.11
SMARCAL1-201ENST00000357276 PLA2R1Q13018 1463 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms