RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 SLKQ9H2G2 1235 aaPredicted RBP11.41□□□□□ -0.58
RBFOX1-203ENST00000355637 PTMSP20962 102 aa11.4□□□□□ -0.58
RBFOX1-203ENST00000355637 LETM1O95202 739 aaPredicted RBP11.4□□□□□ -0.58
RBFOX1-203ENST00000355637 UQCRHLA0A096LP55 91 aa11.4□□□□□ -0.59
RBFOX1-203ENST00000355637 ZBTB7CA1YPR0 619 aa11.4□□□□□ -0.59
RBFOX1-203ENST00000355637 UQCRHP07919 91 aa11.4□□□□□ -0.59
RBFOX1-203ENST00000355637 CC2D1BQ5T0F9 858 aaKnown RBP11.4□□□□□ -0.59
RBFOX1-203ENST00000355637 EP400NLQ6ZTU2 488 aa11.39□□□□□ -0.59
RBFOX1-203ENST00000355637 ZNF771Q7L3S4 317 aaPredicted RBP11.39□□□□□ -0.59
RBFOX1-203ENST00000355637 FHAD1B1AJZ9 1412 aa11.39□□□□□ -0.59
RBFOX1-203ENST00000355637 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.39□□□□□ -0.59
RBFOX1-203ENST00000355637 FHOD3Q2V2M9 1422 aa11.39□□□□□ -0.59
RBFOX1-203ENST00000355637 LRRC9Q6ZRR7 1453 aa11.38□□□□□ -0.59
RBFOX1-203ENST00000355637 ZNF592Q92610 1267 aa11.38□□□□□ -0.59
RBFOX1-203ENST00000355637 SKAP1Q86WV1 359 aa11.38□□□□□ -0.59
RBFOX1-203ENST00000355637 TIAM1Q13009 1591 aa11.37□□□□□ -0.59
RBFOX1-203ENST00000355637 PRR29P0C7W0 189 aa11.37□□□□□ -0.59
RBFOX1-203ENST00000355637 MSNP26038 577 aaKnown RBP11.37□□□□□ -0.59
RBFOX1-203ENST00000355637 GTPBP4Q9BZE4 634 aaKnown RBP11.37□□□□□ -0.59
RBFOX1-203ENST00000355637 PPP1R15AO75807 674 aaPredicted RBP11.37□□□□□ -0.59
RBFOX1-203ENST00000355637 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
RBFOX1-203ENST00000355637 MTERF4Q7Z6M4 381 aaKnown RBP11.37□□□□□ -0.59
RBFOX1-203ENST00000355637 TAF3Q5VWG9 929 aa11.36□□□□□ -0.59
RBFOX1-203ENST00000355637 OS9Q13438 667 aaPredicted RBP11.35□□□□□ -0.59
RBFOX1-203ENST00000355637 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.35□□□□□ -0.59
RBFOX1-203ENST00000355637 CCDC94Q9BW85 323 aaPredicted RBP11.35□□□□□ -0.59
RBFOX1-203ENST00000355637 TRIM6-TRIM34B2RNG4 842 aa11.35□□□□□ -0.59
RBFOX1-203ENST00000355637 TRIM34Q9BYJ4 488 aa11.35□□□□□ -0.59
RBFOX1-203ENST00000355637 RAD54L2Q9Y4B4 1467 aa11.35□□□□□ -0.59
RBFOX1-203ENST00000355637 ZNF622Q969S3 477 aaKnown RBP eCLIP11.35□□□□□ -0.59
RBFOX1-203ENST00000355637 DNAJC2Q99543 621 aaKnown RBP11.35□□□□□ -0.59
RBFOX1-203ENST00000355637 FANCD2Q9BXW9 1451 aa11.34□□□□□ -0.59
RBFOX1-203ENST00000355637 MPNDQ8N594 471 aa11.34□□□□□ -0.59
RBFOX1-203ENST00000355637 TRERF1Q96PN7 1200 aa11.33□□□□□ -0.6
RBFOX1-203ENST00000355637 MAPKBP1O60336 1514 aa11.33□□□□□ -0.6
RBFOX1-203ENST00000355637 MTUS2Q5JR59 1369 aa11.32□□□□□ -0.6
RBFOX1-203ENST00000355637 TNNT3P45378 269 aaPredicted RBP11.32□□□□□ -0.6
RBFOX1-203ENST00000355637 PLCD4Q9BRC7 762 aa11.32□□□□□ -0.6
RBFOX1-203ENST00000355637 MLECQ14165 292 aa11.32□□□□□ -0.6
RBFOX1-203ENST00000355637 TONSLQ96HA7 1378 aa11.32□□□□□ -0.6
RBFOX1-203ENST00000355637 MRE11P49959 708 aa11.32□□□□□ -0.6
RBFOX1-203ENST00000355637 LOC102724159A0A0B4J2E5 919 aa11.31□□□□□ -0.6
RBFOX1-203ENST00000355637 PWP2Q15269 919 aaKnown RBP11.31□□□□□ -0.6
RBFOX1-203ENST00000355637 SPDYE4A6NLX3 237 aa11.31□□□□□ -0.6
RBFOX1-203ENST00000355637 AKNAQ7Z591 1439 aa11.31□□□□□ -0.6
RBFOX1-203ENST00000355637 OFD1O75665 1012 aa11.3□□□□□ -0.6
RBFOX1-203ENST00000355637 TICAM2Q86XR7 235 aa11.3□□□□□ -0.6
RBFOX1-203ENST00000355637 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
RBFOX1-203ENST00000355637 PSEN1P49768 467 aa11.3□□□□□ -0.6
RBFOX1-203ENST00000355637 PCF11O94913 1555 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-203ENST00000355637 ARID3CA6NKF2 412 aa11.29□□□□□ -0.6
RBFOX1-203ENST00000355637 GRPEL1Q9HAV7 217 aa11.29□□□□□ -0.6
RBFOX1-203ENST00000355637 WDR97A6NE52 1622 aa11.29□□□□□ -0.6
RBFOX1-203ENST00000355637 MAP3K1Q13233 1512 aa11.29□□□□□ -0.6
RBFOX1-203ENST00000355637 VGFO15240 615 aaPredicted RBP11.28□□□□□ -0.6
RBFOX1-203ENST00000355637 SPRYD3Q8NCJ5 442 aa11.28□□□□□ -0.6
RBFOX1-203ENST00000355637 BANK1Q8NDB2 785 aa11.28□□□□□ -0.6
RBFOX1-203ENST00000355637 TRHP20396 242 aaPredicted RBP11.28□□□□□ -0.6
RBFOX1-203ENST00000355637 RALBP1Q15311 655 aa11.28□□□□□ -0.6
RBFOX1-203ENST00000355637 AXDND1Q5T1B0 1012 aaPredicted RBP11.28□□□□□ -0.6
RBFOX1-203ENST00000355637 CHIC2Q9UKJ5 165 aa11.28□□□□□ -0.6
RBFOX1-203ENST00000355637 TDRD9Q8NDG6 1382 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-203ENST00000355637 MS4A1P11836 297 aa11.27□□□□□ -0.61
RBFOX1-203ENST00000355637 MMP14P50281 582 aa11.27□□□□□ -0.61
RBFOX1-203ENST00000355637 XPCQ01831 940 aaPredicted RBP11.26□□□□□ -0.61
RBFOX1-203ENST00000355637 NESP48681 1621 aa11.26□□□□□ -0.61
RBFOX1-203ENST00000355637 TNNT1P13805 278 aa11.25□□□□□ -0.61
RBFOX1-203ENST00000355637 EXOC6Q8TAG9 804 aa11.25□□□□□ -0.61
RBFOX1-203ENST00000355637 MRS2Q9HD23 443 aa11.25□□□□□ -0.61
RBFOX1-203ENST00000355637 POLA1P09884 1462 aaPredicted RBP11.25□□□□□ -0.61
RBFOX1-203ENST00000355637 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
RBFOX1-203ENST00000355637 DYNC1I1O14576 645 aa11.25□□□□□ -0.61
RBFOX1-203ENST00000355637 LMOD3Q0VAK6 560 aa11.25□□□□□ -0.61
RBFOX1-203ENST00000355637 CC2D2AQ9P2K1 1620 aa11.25□□□□□ -0.61
RBFOX1-203ENST00000355637 CASKIN1Q8WXD9 1431 aa11.24□□□□□ -0.61
RBFOX1-203ENST00000355637 CCDC184Q52MB2 194 aa11.24□□□□□ -0.61
RBFOX1-203ENST00000355637 TSC1Q92574 1164 aa11.24□□□□□ -0.61
RBFOX1-203ENST00000355637 FMN1Q68DA7 1419 aa11.24□□□□□ -0.61
RBFOX1-203ENST00000355637 BECN1Q14457 450 aa11.24□□□□□ -0.61
RBFOX1-203ENST00000355637 GRIPAP1Q4V328 841 aa11.24□□□□□ -0.61
RBFOX1-203ENST00000355637 ZSCAN30Q86W11 494 aa11.24□□□□□ -0.61
RBFOX1-203ENST00000355637 FYCO1Q9BQS8 1478 aa11.24□□□□□ -0.61
RBFOX1-203ENST00000355637 FSD2A1L4K1 749 aa11.23□□□□□ -0.61
RBFOX1-203ENST00000355637 TOPBP1Q92547 1522 aa11.23□□□□□ -0.61
RBFOX1-203ENST00000355637 FGD6Q6ZV73 1430 aa11.23□□□□□ -0.61
RBFOX1-203ENST00000355637 PPP6R1Q9UPN7 881 aa11.23□□□□□ -0.61
RBFOX1-203ENST00000355637 TMX1Q9H3N1 280 aa11.22□□□□□ -0.61
RBFOX1-203ENST00000355637 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
RBFOX1-203ENST00000355637 ATP2B3Q16720 1220 aa11.21□□□□□ -0.61
RBFOX1-203ENST00000355637 ABCA10Q8WWZ4 1543 aa11.21□□□□□ -0.61
RBFOX1-203ENST00000355637 PRDM2Q13029 1718 aa11.21□□□□□ -0.61
RBFOX1-203ENST00000355637 GPATCH11Q8N954 259 aa11.21□□□□□ -0.62
RBFOX1-203ENST00000355637 CCDC18Q5T9S5 1454 aa11.21□□□□□ -0.62
RBFOX1-203ENST00000355637 DNMBPQ6XZF7 1577 aa11.21□□□□□ -0.62
RBFOX1-203ENST00000355637 FAM177BA6PVY3 158 aa11.2□□□□□ -0.62
RBFOX1-203ENST00000355637 TRAK2O60296 914 aa11.2□□□□□ -0.62
RBFOX1-203ENST00000355637 TERF1P54274 439 aa11.19□□□□□ -0.62
RBFOX1-203ENST00000355637 TIGD1Q96MW7 591 aa11.19□□□□□ -0.62
RBFOX1-203ENST00000355637 PHF14O94880 888 aa11.19□□□□□ -0.62
RBFOX1-203ENST00000355637 RGL3Q3MIN7 710 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms