RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 NOL10Q9BSC4 688 aaKnown RBP7.14□□□□□ -1.27
SRGAP1-201ENST00000355086 IPO7O95373 1038 aaKnown RBP7.14□□□□□ -1.27
SRGAP1-201ENST00000355086 AMPHP49418 695 aa7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 ROCK2O75116 1388 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 LTV1Q96GA3 475 aaPredicted RBP7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 RBM19Q9Y4C8 960 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 ERCC6Q03468 1493 aa7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 CEP162Q5TB80 1403 aa7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 CHMP4CQ96CF2 233 aa7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 DDX11L8A8MPP1 907 aa7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 LMOD3Q0VAK6 560 aa7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 CWC22Q9HCG8 908 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 NGDNQ8NEJ9 315 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 RILPL2Q969X0 211 aa7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 LRRFIP1Q32MZ4 808 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-201ENST00000355086 MCTP1Q6DN14 999 aa7.12□□□□□ -1.27
SRGAP1-201ENST00000355086 EID1Q9Y6B2 187 aa7.12□□□□□ -1.27
SRGAP1-201ENST00000355086 MSH5O43196 834 aa7.12□□□□□ -1.27
SRGAP1-201ENST00000355086 CCDC47Q96A33 483 aaKnown RBP7.12□□□□□ -1.27
SRGAP1-201ENST00000355086 FOXD4L6Q3SYB3 417 aaPredicted RBP7.12□□□□□ -1.27
SRGAP1-201ENST00000355086 ODF2Q5BJF6 829 aa7.12□□□□□ -1.27
SRGAP1-201ENST00000355086 FOXD4L3Q6VB84 417 aaPredicted RBP7.12□□□□□ -1.27
SRGAP1-201ENST00000355086 ANKRD20A12PQ8NF67 263 aa7.12□□□□□ -1.27
SRGAP1-201ENST00000355086 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.12□□□□□ -1.27
SRGAP1-201ENST00000355086 ATP6V1DQ9Y5K8 247 aa7.11□□□□□ -1.27
SRGAP1-201ENST00000355086 HSP90AA2PQ14568 343 aaPredicted RBP7.11□□□□□ -1.27
SRGAP1-201ENST00000355086 CPLX2Q6PUV4 134 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-201ENST00000355086 TRIM29Q14134 588 aa7.11□□□□□ -1.27
SRGAP1-201ENST00000355086 ZNF592Q92610 1267 aa7.11□□□□□ -1.27
SRGAP1-201ENST00000355086 KIF27Q86VH2 1401 aa7.11□□□□□ -1.27
SRGAP1-201ENST00000355086 CCDC43Q96MW1 224 aaKnown RBP7.11□□□□□ -1.27
SRGAP1-201ENST00000355086 RALBP1Q15311 655 aa7.11□□□□□ -1.27
SRGAP1-201ENST00000355086 CCER2I3L3R5 266 aa7.11□□□□□ -1.27
SRGAP1-201ENST00000355086 EVA1CP58658 441 aa7.1□□□□□ -1.27
SRGAP1-201ENST00000355086 TERF2IPQ9NYB0 399 aa7.1□□□□□ -1.27
SRGAP1-201ENST00000355086 C1orf141Q5JVX7 400 aa7.1□□□□□ -1.27
SRGAP1-201ENST00000355086 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.1□□□□□ -1.27
SRGAP1-201ENST00000355086 CLUAP1Q96AJ1 413 aa7.1□□□□□ -1.27
SRGAP1-201ENST00000355086 EIF3AQ14152 1382 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-201ENST00000355086 VPS37DQ86XT2 251 aa7.1□□□□□ -1.27
SRGAP1-201ENST00000355086 HSPA5P11021 654 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-201ENST00000355086 TEX35Q5T0J7 233 aa7.1□□□□□ -1.27
SRGAP1-201ENST00000355086 ZNF771Q7L3S4 317 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-201ENST00000355086 FBXW7Q969H0 707 aa7.1□□□□□ -1.27
SRGAP1-201ENST00000355086 HOOK1Q9UJC3 728 aaKnown RBP7.09□□□□□ -1.27
SRGAP1-201ENST00000355086 CCDC146Q8IYE0 955 aa7.09□□□□□ -1.27
SRGAP1-201ENST00000355086 RUFY1Q96T51 708 aa7.09□□□□□ -1.27
SRGAP1-201ENST00000355086 CT47A1Q5JQC4 288 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-201ENST00000355086 NAP1L1P55209 391 aaKnown RBP7.09□□□□□ -1.27
SRGAP1-201ENST00000355086 CENPJQ9HC77 1338 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-201ENST00000355086 R3HCC1Q9Y3T6 440 aaKnown RBP7.09□□□□□ -1.27
SRGAP1-201ENST00000355086 EEA1Q15075 1411 aa7.09□□□□□ -1.27
SRGAP1-201ENST00000355086 DHX16O60231 1041 aaKnown RBP7.09□□□□□ -1.28
SRGAP1-201ENST00000355086 APPP05067 770 aa7.09□□□□□ -1.28
SRGAP1-201ENST00000355086 PKD2Q13563 968 aa7.09□□□□□ -1.28
SRGAP1-201ENST00000355086 AK7Q96M32 723 aa7.08□□□□□ -1.28
SRGAP1-201ENST00000355086 HOMER1Q86YM7 354 aa7.08□□□□□ -1.28
SRGAP1-201ENST00000355086 DDX49Q9Y6V7 483 aaKnown RBP7.08□□□□□ -1.28
SRGAP1-201ENST00000355086 TRDNQ13061 729 aa7.08□□□□□ -1.28
SRGAP1-201ENST00000355086 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.08□□□□□ -1.28
SRGAP1-201ENST00000355086 ANKRD45Q5TZF3 282 aa7.08□□□□□ -1.28
SRGAP1-201ENST00000355086 CPLX1O14810 134 aa7.07□□□□□ -1.28
SRGAP1-201ENST00000355086 DIAPH3Q9NSV4 1193 aa7.07□□□□□ -1.28
SRGAP1-201ENST00000355086 EIF4G1Q04637 1599 aaKnown RBP7.07□□□□□ -1.28
SRGAP1-201ENST00000355086 IPO9Q96P70 1041 aaKnown RBP7.07□□□□□ -1.28
SRGAP1-201ENST00000355086 FHAD1B1AJZ9 1412 aa7.07□□□□□ -1.28
SRGAP1-201ENST00000355086 EPS15P42566 896 aa7.07□□□□□ -1.28
SRGAP1-201ENST00000355086 NGEFQ8N5V2 710 aa7.07□□□□□ -1.28
SRGAP1-201ENST00000355086 NUTM2FA1L443 756 aa7.07□□□□□ -1.28
SRGAP1-201ENST00000355086 RUFY2Q8WXA3 655 aa7.07□□□□□ -1.28
SRGAP1-201ENST00000355086 SAMD1Q6SPF0 538 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-201ENST00000355086 CDR1P51861 262 aa7.06□□□□□ -1.28
SRGAP1-201ENST00000355086 FOXD1Q16676 465 aa7.06□□□□□ -1.28
SRGAP1-201ENST00000355086 NFXL1Q6ZNB6 911 aa7.06□□□□□ -1.28
SRGAP1-201ENST00000355086 ZFYVE27Q5T4F4 411 aa7.06□□□□□ -1.28
SRGAP1-201ENST00000355086 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-201ENST00000355086 MAP7D2Q96T17 732 aa7.06□□□□□ -1.28
SRGAP1-201ENST00000355086 ANO2Q9NQ90 1003 aa7.06□□□□□ -1.28
SRGAP1-201ENST00000355086 NEXNQ0ZGT2 675 aa7.06□□□□□ -1.28
SRGAP1-201ENST00000355086 MEX3CQ5U5Q3 659 aaKnown RBP7.05□□□□□ -1.28
SRGAP1-201ENST00000355086 ERICH2A1L162 156 aa7.05□□□□□ -1.28
SRGAP1-201ENST00000355086 C9orf78Q9NZ63 289 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-201ENST00000355086 HSP90AB2PQ58FF8 381 aa7.05□□□□□ -1.28
SRGAP1-201ENST00000355086 ZKSCAN1P17029 563 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-201ENST00000355086 SKOR2Q2VWA4 1001 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-201ENST00000355086 BICD2Q8TD16 824 aa7.05□□□□□ -1.28
SRGAP1-201ENST00000355086 CEP164Q9UPV0 1460 aa7.05□□□□□ -1.28
SRGAP1-201ENST00000355086 RDXP35241 583 aaKnown RBP7.04□□□□□ -1.28
SRGAP1-201ENST00000355086 TTC5Q8N0Z6 440 aa7.04□□□□□ -1.28
SRGAP1-201ENST00000355086 TEFQ10587 303 aa7.04□□□□□ -1.28
SRGAP1-201ENST00000355086 SYTL4Q96C24 671 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-201ENST00000355086 NUTM2DQ5VT03 806 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-201ENST00000355086 KLHL34Q8N239 644 aa7.04□□□□□ -1.28
SRGAP1-201ENST00000355086 SAFBQ15424 915 aaKnown RBP eCLIP7.04□□□□□ -1.28
SRGAP1-201ENST00000355086 TIMELESSQ9UNS1 1208 aa7.04□□□□□ -1.28
SRGAP1-201ENST00000355086 ACBD3Q9H3P7 528 aa7.04□□□□□ -1.28
SRGAP1-201ENST00000355086 MYO6Q9UM54 1294 aa7.04□□□□□ -1.28
SRGAP1-201ENST00000355086 RSPH6AQ9H0K4 717 aa7.03□□□□□ -1.28
SRGAP1-201ENST00000355086 CCDC173Q0VFZ6 552 aa7.03□□□□□ -1.28
SRGAP1-201ENST00000355086 PAF1Q8N7H5 531 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms