RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 HDGFL2Q7Z4V5 671 aaPredicted RBP16.19■□□□□ 0.18
PCDHB11-201ENST00000354757 PRKRIP1Q9H875 184 aaPredicted RBP16.19■□□□□ 0.18
PCDHB11-201ENST00000354757 KIF7Q2M1P5 1343 aa16.17■□□□□ 0.18
PCDHB11-201ENST00000354757 ANP32AP39687 249 aaKnown RBP16.16■□□□□ 0.18
PCDHB11-201ENST00000354757 ARXQ96QS3 562 aa16.16■□□□□ 0.18
PCDHB11-201ENST00000354757 WASHC2AQ641Q2 1341 aa16.15■□□□□ 0.18
PCDHB11-201ENST00000354757 THOC2Q8NI27 1593 aaKnown RBP16.15■□□□□ 0.18
PCDHB11-201ENST00000354757 SUPT6HQ7KZ85 1726 aaKnown RBP16.15■□□□□ 0.18
PCDHB11-201ENST00000354757 ABCC5O15440 1437 aa16.14■□□□□ 0.17
PCDHB11-201ENST00000354757 NGDNQ8NEJ9 315 aaKnown RBP16.13■□□□□ 0.17
PCDHB11-201ENST00000354757 EIF3AQ14152 1382 aaKnown RBP16.13■□□□□ 0.17
PCDHB11-201ENST00000354757 RRP7AQ9Y3A4 280 aaKnown RBP16.13■□□□□ 0.17
PCDHB11-201ENST00000354757 RALBP1Q15311 655 aa16.13■□□□□ 0.17
PCDHB11-201ENST00000354757 NLRP13Q86W25 1043 aa16.13■□□□□ 0.17
PCDHB11-201ENST00000354757 FTSJ3Q8IY81 847 aaKnown RBP16.11■□□□□ 0.17
PCDHB11-201ENST00000354757 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
PCDHB11-201ENST00000354757 TERF2IPQ9NYB0 399 aa16.1■□□□□ 0.17
PCDHB11-201ENST00000354757 PTPRKQ15262 1439 aa16.1■□□□□ 0.17
PCDHB11-201ENST00000354757 CAMSAP2Q08AD1 1489 aa16.09■□□□□ 0.17
PCDHB11-201ENST00000354757 RGS3P49796 1198 aa16.09■□□□□ 0.17
PCDHB11-201ENST00000354757 KIAA1107Q9UPP5 1409 aa16.08■□□□□ 0.17
PCDHB11-201ENST00000354757 CCDC7Q96M83 1385 aa16.08■□□□□ 0.16
PCDHB11-201ENST00000354757 CD109Q6YHK3 1445 aa16.08■□□□□ 0.16
PCDHB11-201ENST00000354757 CABP2Q9NPB3 220 aa16.08■□□□□ 0.16
PCDHB11-201ENST00000354757 ATP10BO94823 1461 aa16.07■□□□□ 0.16
PCDHB11-201ENST00000354757 NUP153P49790 1475 aaKnown RBP16.07■□□□□ 0.16
PCDHB11-201ENST00000354757 CENPJQ9HC77 1338 aaPredicted RBP16.06■□□□□ 0.16
PCDHB11-201ENST00000354757 PTPN23Q9H3S7 1636 aa16.05■□□□□ 0.16
PCDHB11-201ENST00000354757 NCOA1Q15788 1441 aa16.04■□□□□ 0.16
PCDHB11-201ENST00000354757 EIF5BO60841 1220 aaKnown RBP16.04■□□□□ 0.16
PCDHB11-201ENST00000354757 WDR97A6NE52 1622 aa16.04■□□□□ 0.16
PCDHB11-201ENST00000354757 EVC2Q86UK5 1308 aa16.04■□□□□ 0.16
PCDHB11-201ENST00000354757 EIF4G3O43432 1585 aaKnown RBP16.03■□□□□ 0.16
PCDHB11-201ENST00000354757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.03■□□□□ 0.16
PCDHB11-201ENST00000354757 GGNBP2Q9H3C7 697 aa16.02■□□□□ 0.16
PCDHB11-201ENST00000354757 GPATCH8Q9UKJ3 1502 aaKnown RBP16.02■□□□□ 0.15
PCDHB11-201ENST00000354757 MYBBP1AQ9BQG0 1328 aaKnown RBP16.02■□□□□ 0.15
PCDHB11-201ENST00000354757 CCDC141Q6ZP82 1450 aa16.02■□□□□ 0.15
PCDHB11-201ENST00000354757 SLC26A8Q96RN1 970 aa16.02■□□□□ 0.15
PCDHB11-201ENST00000354757 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.15
PCDHB11-201ENST00000354757 FBXO31Q5XUX0 539 aaPredicted RBP16.01■□□□□ 0.15
PCDHB11-201ENST00000354757 CLUAP1Q96AJ1 413 aa16.01■□□□□ 0.15
PCDHB11-201ENST00000354757 MYH16Q9H6N6 1097 aa16.01■□□□□ 0.15
PCDHB11-201ENST00000354757 RCAN3Q9UKA8 241 aa16.01■□□□□ 0.15
PCDHB11-201ENST00000354757 ADAMTS12P58397 1594 aa16.01■□□□□ 0.15
PCDHB11-201ENST00000354757 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
PCDHB11-201ENST00000354757 RTN4Q9NQC3 1192 aaKnown RBP16■□□□□ 0.15
PCDHB11-201ENST00000354757 DEKP35659 375 aaKnown RBP16■□□□□ 0.15
PCDHB11-201ENST00000354757 SLC12A5Q9H2X9 1139 aa16■□□□□ 0.15
PCDHB11-201ENST00000354757 ADGRL1O94910 1474 aa15.99■□□□□ 0.15
PCDHB11-201ENST00000354757 MAP3K1Q13233 1512 aa15.99■□□□□ 0.15
PCDHB11-201ENST00000354757 TXNDC2Q86VQ3 553 aa15.99■□□□□ 0.15
PCDHB11-201ENST00000354757 UPF2Q9HAU5 1272 aaKnown RBP15.99■□□□□ 0.15
PCDHB11-201ENST00000354757 PLEKHH2Q8IVE3 1493 aa15.99■□□□□ 0.15
PCDHB11-201ENST00000354757 CEBPAP49715 358 aaPredicted RBP15.99■□□□□ 0.15
PCDHB11-201ENST00000354757 CCDC184Q52MB2 194 aa15.99■□□□□ 0.15
PCDHB11-201ENST00000354757 NUTM2GQ5VZR2 741 aa15.99■□□□□ 0.15
PCDHB11-201ENST00000354757 BCL2L13Q9BXK5 485 aa15.99■□□□□ 0.15
PCDHB11-201ENST00000354757 ELL2O00472 640 aaPredicted RBP15.99■□□□□ 0.15
PCDHB11-201ENST00000354757 HSP90AA1P07900 732 aaKnown RBP15.99■□□□□ 0.15
PCDHB11-201ENST00000354757 CSB-PGBD3P0DP91 1061 aa15.99■□□□□ 0.15
PCDHB11-201ENST00000354757 APAF1O14727 1248 aa15.98■□□□□ 0.15
PCDHB11-201ENST00000354757 AMPHP49418 695 aa15.98■□□□□ 0.15
PCDHB11-201ENST00000354757 ROCK1Q13464 1354 aa15.98■□□□□ 0.15
PCDHB11-201ENST00000354757 PRAM1Q96QH2 718 aa15.97■□□□□ 0.15
PCDHB11-201ENST00000354757 ANKRD30BQ9BXX2 1392 aa15.97■□□□□ 0.15
PCDHB11-201ENST00000354757 PLIN1O60240 522 aa15.97■□□□□ 0.15
PCDHB11-201ENST00000354757 KIF14Q15058 1648 aa15.96■□□□□ 0.15
PCDHB11-201ENST00000354757 AKNAQ7Z591 1439 aa15.96■□□□□ 0.15
PCDHB11-201ENST00000354757 CGNL1Q0VF96 1302 aa15.96■□□□□ 0.14
PCDHB11-201ENST00000354757 RTF1Q92541 710 aaKnown RBP15.96■□□□□ 0.14
PCDHB11-201ENST00000354757 WDR62O43379 1518 aa15.95■□□□□ 0.14
PCDHB11-201ENST00000354757 GOLGA2Q08379 1002 aa15.95■□□□□ 0.14
PCDHB11-201ENST00000354757 FANCAO15360 1455 aa15.95■□□□□ 0.14
PCDHB11-201ENST00000354757 RAPGEF6Q8TEU7 1601 aa15.94■□□□□ 0.14
PCDHB11-201ENST00000354757 APBB1O00213 710 aa15.93■□□□□ 0.14
PCDHB11-201ENST00000354757 PNNQ9H307 717 aaKnown RBP15.93■□□□□ 0.14
PCDHB11-201ENST00000354757 DISP1Q96F81 1524 aa15.93■□□□□ 0.14
PCDHB11-201ENST00000354757 COG3Q96JB2 828 aa15.92■□□□□ 0.14
PCDHB11-201ENST00000354757 ASXL2Q76L83 1435 aa15.92■□□□□ 0.14
PCDHB11-201ENST00000354757 IDI1Q13907 227 aa15.92■□□□□ 0.14
PCDHB11-201ENST00000354757 PMFBP1Q8TBY8 1022 aa15.92■□□□□ 0.14
PCDHB11-201ENST00000354757 ERBINQ96RT1 1412 aa15.92■□□□□ 0.14
PCDHB11-201ENST00000354757 RBM33Q96EV2 1170 aaKnown RBP15.91■□□□□ 0.14
PCDHB11-201ENST00000354757 KIAA0556O60303 1618 aa15.91■□□□□ 0.14
PCDHB11-201ENST00000354757 TCERG1O14776 1098 aaKnown RBP15.9■□□□□ 0.14
PCDHB11-201ENST00000354757 UGGT2Q9NYU1 1516 aa15.9■□□□□ 0.14
PCDHB11-201ENST00000354757 CTTNBP2Q8WZ74 1663 aa15.9■□□□□ 0.14
PCDHB11-201ENST00000354757 CNTLNQ9NXG0 1405 aa15.9■□□□□ 0.14
PCDHB11-201ENST00000354757 ZNF330Q9Y3S2 320 aaPredicted RBP15.9■□□□□ 0.14
PCDHB11-201ENST00000354757 ADGRF5Q8IZF2 1346 aa15.9■□□□□ 0.14
PCDHB11-201ENST00000354757 HMOX1P09601 288 aa15.89■□□□□ 0.13
PCDHB11-201ENST00000354757 SLC52A1Q9NWF4 448 aa15.89■□□□□ 0.13
PCDHB11-201ENST00000354757 NUP160Q12769 1436 aa15.88■□□□□ 0.13
PCDHB11-201ENST00000354757 ABCA5Q8WWZ7 1642 aa15.88■□□□□ 0.13
PCDHB11-201ENST00000354757 MTHFSP49914 203 aa15.88■□□□□ 0.13
PCDHB11-201ENST00000354757 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.88■□□□□ 0.13
PCDHB11-201ENST00000354757 ADAMTS8Q9UP79 889 aa15.87■□□□□ 0.13
PCDHB11-201ENST00000354757 TRAPPC8Q9Y2L5 1435 aa15.87■□□□□ 0.13
PCDHB11-201ENST00000354757 WAPLQ7Z5K2 1190 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms