RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 CDC42BPBQ9Y5S2 1711 aa16.39■□□□□ 0.21
DDX4-201ENST00000353507 FAM135AQ9P2D6 1515 aa16.38■□□□□ 0.21
DDX4-201ENST00000353507 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
DDX4-201ENST00000353507 E9PCH4 1651 aa16.37■□□□□ 0.21
DDX4-201ENST00000353507 KTN1Q86UP2 1357 aaKnown RBP16.36■□□□□ 0.21
DDX4-201ENST00000353507 CCDC144AA2RUR9 1427 aa16.35■□□□□ 0.21
DDX4-201ENST00000353507 MYBBP1AQ9BQG0 1328 aaKnown RBP16.35■□□□□ 0.21
DDX4-201ENST00000353507 BRD4O60885 1362 aaPredicted RBP16.34■□□□□ 0.21
DDX4-201ENST00000353507 RALBP1Q15311 655 aa16.34■□□□□ 0.21
DDX4-201ENST00000353507 RSPH4AQ5TD94 716 aa16.34■□□□□ 0.21
DDX4-201ENST00000353507 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
DDX4-201ENST00000353507 TRPM1Q7Z4N2 1603 aa16.33■□□□□ 0.21
DDX4-201ENST00000353507 RNF123Q5XPI4 1314 aa16.33■□□□□ 0.2
DDX4-201ENST00000353507 SYCP2Q9BX26 1530 aa16.33■□□□□ 0.2
DDX4-201ENST00000353507 CCDC136Q96JN2 1154 aa16.32■□□□□ 0.2
DDX4-201ENST00000353507 ARHGAP5Q13017 1502 aa16.31■□□□□ 0.2
DDX4-201ENST00000353507 PRAG1Q86YV5 1406 aa16.31■□□□□ 0.2
DDX4-201ENST00000353507 LRPPRCP42704 1394 aaKnown RBP16.31■□□□□ 0.2
DDX4-201ENST00000353507 UNC13BO14795 1591 aa16.31■□□□□ 0.2
DDX4-201ENST00000353507 MAST1Q9Y2H9 1570 aa16.29■□□□□ 0.2
DDX4-201ENST00000353507 TTC37Q6PGP7 1564 aa16.29■□□□□ 0.2
DDX4-201ENST00000353507 RGL3Q3MIN7 710 aa16.28■□□□□ 0.2
DDX4-201ENST00000353507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.28■□□□□ 0.2
DDX4-201ENST00000353507 MYO5CQ9NQX4 1742 aa16.27■□□□□ 0.19
DDX4-201ENST00000353507 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
DDX4-201ENST00000353507 CHD1O14646 1710 aa16.26■□□□□ 0.19
DDX4-201ENST00000353507 PLXNC1O60486 1568 aa16.25■□□□□ 0.19
DDX4-201ENST00000353507 IQGAP3Q86VI3 1631 aa16.25■□□□□ 0.19
DDX4-201ENST00000353507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.25■□□□□ 0.19
DDX4-201ENST00000353507 A2MP01023 1474 aa16.25■□□□□ 0.19
DDX4-201ENST00000353507 LAMC1P11047 1609 aa16.25■□□□□ 0.19
DDX4-201ENST00000353507 EIF2AK4Q9P2K8 1649 aaKnown RBP16.25■□□□□ 0.19
DDX4-201ENST00000353507 PARD3Q8TEW0 1356 aa16.24■□□□□ 0.19
DDX4-201ENST00000353507 PLEKHH2Q8IVE3 1493 aa16.24■□□□□ 0.19
DDX4-201ENST00000353507 NBPF1Q3BBV0 1214 aa16.23■□□□□ 0.19
DDX4-201ENST00000353507 GPRASP1Q5JY77 1395 aa16.23■□□□□ 0.19
DDX4-201ENST00000353507 COL17A1Q9UMD9 1497 aaPredicted RBP16.23■□□□□ 0.19
DDX4-201ENST00000353507 PRDM15P57071 1507 aaPredicted RBP16.23■□□□□ 0.19
DDX4-201ENST00000353507 PLA2R1Q13018 1463 aa16.22■□□□□ 0.19
DDX4-201ENST00000353507 DUOX2Q9NRD8 1548 aa16.21■□□□□ 0.18
DDX4-201ENST00000353507 SALL2Q9Y467 1007 aaPredicted RBP16.21■□□□□ 0.18
DDX4-201ENST00000353507 RRP1P56182 461 aaKnown RBP16.2■□□□□ 0.18
DDX4-201ENST00000353507 ABCC2Q92887 1545 aa16.19■□□□□ 0.18
DDX4-201ENST00000353507 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
DDX4-201ENST00000353507 PDE3BQ13370 1112 aa16.18■□□□□ 0.18
DDX4-201ENST00000353507 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
DDX4-201ENST00000353507 DISP3Q9P2K9 1392 aa16.18■□□□□ 0.18
DDX4-201ENST00000353507 ERBINQ96RT1 1412 aa16.18■□□□□ 0.18
DDX4-201ENST00000353507 NOP58Q9Y2X3 529 aaKnown RBP16.17■□□□□ 0.18
DDX4-201ENST00000353507 ANP32AP39687 249 aaKnown RBP16.17■□□□□ 0.18
DDX4-201ENST00000353507 TMF1P82094 1093 aa16.17■□□□□ 0.18
DDX4-201ENST00000353507 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
DDX4-201ENST00000353507 WASHC2CQ9Y4E1 1318 aa16.17■□□□□ 0.18
DDX4-201ENST00000353507 PER1O15534 1290 aaPredicted RBP16.16■□□□□ 0.18
DDX4-201ENST00000353507 MAGI2Q86UL8 1455 aa16.16■□□□□ 0.18
DDX4-201ENST00000353507 TESK2Q96S53 571 aa16.15■□□□□ 0.18
DDX4-201ENST00000353507 ATP10AO60312 1499 aa16.15■□□□□ 0.18
DDX4-201ENST00000353507 RNF17Q9BXT8 1623 aaKnown RBP16.14■□□□□ 0.17
DDX4-201ENST00000353507 PANK3Q9H999 370 aa16.14■□□□□ 0.17
DDX4-201ENST00000353507 MYT1LQ9UL68 1186 aa16.14■□□□□ 0.17
DDX4-201ENST00000353507 BCL11AQ9H165 835 aa16.13■□□□□ 0.17
DDX4-201ENST00000353507 EXOC6Q8TAG9 804 aa16.13■□□□□ 0.17
DDX4-201ENST00000353507 ERCC6L2Q5T890 1561 aa16.12■□□□□ 0.17
DDX4-201ENST00000353507 BLMP54132 1417 aaPredicted RBP16.11■□□□□ 0.17
DDX4-201ENST00000353507 ZMYM4Q5VZL5 1548 aa16.11■□□□□ 0.17
DDX4-201ENST00000353507 PLCH2O75038 1416 aa16.11■□□□□ 0.17
DDX4-201ENST00000353507 INSRP06213 1382 aa16.1■□□□□ 0.17
DDX4-201ENST00000353507 EFCAB2Q5VUJ9 269 aa16.1■□□□□ 0.17
DDX4-201ENST00000353507 ABCC1P33527 1531 aa16.1■□□□□ 0.17
DDX4-201ENST00000353507 ZCCHC11Q5TAX3 1644 aaKnown RBP16.1■□□□□ 0.17
DDX4-201ENST00000353507 CDCA7LQ96GN5 454 aa16.09■□□□□ 0.17
DDX4-201ENST00000353507 IPO9Q96P70 1041 aaKnown RBP16.08■□□□□ 0.16
DDX4-201ENST00000353507 MADDQ8WXG6 1647 aa16.07■□□□□ 0.16
DDX4-201ENST00000353507 PAK3O75914 559 aaPredicted RBP16.07■□□□□ 0.16
DDX4-201ENST00000353507 IQGAP1P46940 1657 aa16.06■□□□□ 0.16
DDX4-201ENST00000353507 TCERG1O14776 1098 aaKnown RBP16.06■□□□□ 0.16
DDX4-201ENST00000353507 TRAPPC8Q9Y2L5 1435 aa16.06■□□□□ 0.16
DDX4-201ENST00000353507 CEP152O94986 1710 aa16.05■□□□□ 0.16
DDX4-201ENST00000353507 SPHKAPQ2M3C7 1700 aa16.05■□□□□ 0.16
DDX4-201ENST00000353507 ZBTB47Q9UFB7 747 aaPredicted RBP16.04■□□□□ 0.16
DDX4-201ENST00000353507 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
DDX4-201ENST00000353507 TRPM2O94759 1503 aa16.04■□□□□ 0.16
DDX4-201ENST00000353507 SPAG9O60271 1321 aaKnown RBP16.04■□□□□ 0.16
DDX4-201ENST00000353507 NBR1Q14596 966 aa16.04■□□□□ 0.16
DDX4-201ENST00000353507 CDCA8Q53HL2 280 aa16.03■□□□□ 0.16
DDX4-201ENST00000353507 WDR7Q9Y4E6 1490 aa16.03■□□□□ 0.16
DDX4-201ENST00000353507 WDR43Q15061 677 aaKnown RBP eCLIP16.02■□□□□ 0.15
DDX4-201ENST00000353507 SYNMO15061 1565 aa16.02■□□□□ 0.15
DDX4-201ENST00000353507 ZFYVE16Q7Z3T8 1539 aa16.01■□□□□ 0.15
DDX4-201ENST00000353507 UHRF1BP1LA0JNW5 1464 aa16.01■□□□□ 0.15
DDX4-201ENST00000353507 SCAF11Q99590 1463 aaKnown RBP16.01■□□□□ 0.15
DDX4-201ENST00000353507 PLIN1O60240 522 aa16.01■□□□□ 0.15
DDX4-201ENST00000353507 NPM2Q86SE8 214 aaKnown RBP16■□□□□ 0.15
DDX4-201ENST00000353507 CLTCL1P53675 1640 aa16■□□□□ 0.15
DDX4-201ENST00000353507 ADAMTS8Q9UP79 889 aa16■□□□□ 0.15
DDX4-201ENST00000353507 RTEL1-TNFRSF6BF6WH68 1400 aa16■□□□□ 0.15
DDX4-201ENST00000353507 PPP2R1AP30153 589 aa15.99■□□□□ 0.15
DDX4-201ENST00000353507 TET3O43151 1660 aa15.99■□□□□ 0.15
DDX4-201ENST00000353507 MS4A1P11836 297 aa15.98■□□□□ 0.15
DDX4-201ENST00000353507 STAC3Q96MF2 364 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms