RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 KDM6BO15054 1643 aa23.31■■□□□ 1.32
CTSB-202ENST00000353047 FAM161AQ3B820 660 aa23.3■■□□□ 1.32
CTSB-202ENST00000353047 DHX29Q7Z478 1369 aaKnown RBP23.3■■□□□ 1.32
CTSB-202ENST00000353047 BRD4O60885 1362 aaPredicted RBP23.29■■□□□ 1.32
CTSB-202ENST00000353047 CCDC144AA2RUR9 1427 aa23.29■■□□□ 1.32
CTSB-202ENST00000353047 KIAA1107Q9UPP5 1409 aa23.28■■□□□ 1.32
CTSB-202ENST00000353047 CC2D2AQ9P2K1 1620 aa23.28■■□□□ 1.32
CTSB-202ENST00000353047 U2SURPO15042 1029 aaKnown RBP23.28■■□□□ 1.32
CTSB-202ENST00000353047 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
CTSB-202ENST00000353047 BECN1Q14457 450 aa23.26■■□□□ 1.31
CTSB-202ENST00000353047 MS4A1P11836 297 aa23.26■■□□□ 1.31
CTSB-202ENST00000353047 FTSJ3Q8IY81 847 aaKnown RBP23.25■■□□□ 1.31
CTSB-202ENST00000353047 GRIN2BQ13224 1484 aa23.25■■□□□ 1.31
CTSB-202ENST00000353047 CENPQQ7L2Z9 268 aaPredicted RBP23.24■■□□□ 1.31
CTSB-202ENST00000353047 FOXD4L1Q9NU39 408 aa23.24■■□□□ 1.31
CTSB-202ENST00000353047 MAGI3Q5TCQ9 1506 aa23.24■■□□□ 1.31
CTSB-202ENST00000353047 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
CTSB-202ENST00000353047 DNMBPQ6XZF7 1577 aa23.23■■□□□ 1.31
CTSB-202ENST00000353047 CFAP43Q8NDM7 1665 aa23.23■■□□□ 1.31
CTSB-202ENST00000353047 MFAP1P55081 439 aaKnown RBP23.22■■□□□ 1.31
CTSB-202ENST00000353047 MIA2Q96PC5 1412 aa23.22■■□□□ 1.31
CTSB-202ENST00000353047 PRKCSHP14314 528 aaPredicted RBP23.21■■□□□ 1.31
CTSB-202ENST00000353047 TPRNQ4KMQ1 711 aa23.21■■□□□ 1.31
CTSB-202ENST00000353047 MORC1Q86VD1 984 aa23.21■■□□□ 1.31
CTSB-202ENST00000353047 PPP2R1AP30153 589 aa23.2■■□□□ 1.3
CTSB-202ENST00000353047 USP35Q9P2H5 1018 aa23.2■■□□□ 1.3
CTSB-202ENST00000353047 NAP1L5Q96NT1 182 aaPredicted RBP23.2■■□□□ 1.3
CTSB-202ENST00000353047 TRAK1Q9UPV9 953 aa23.19■■□□□ 1.3
CTSB-202ENST00000353047 PLB1Q6P1J6 1458 aa23.18■■□□□ 1.3
CTSB-202ENST00000353047 UGGT2Q9NYU1 1516 aa23.17■■□□□ 1.3
CTSB-202ENST00000353047 SLC24A1O60721 1099 aa23.17■■□□□ 1.3
CTSB-202ENST00000353047 U2AF1L5P0DN76 240 aaPredicted RBP23.16■■□□□ 1.3
CTSB-202ENST00000353047 U2AF1Q01081 240 aaKnown RBP eCLIP23.16■■□□□ 1.3
CTSB-202ENST00000353047 CENPJQ9HC77 1338 aaPredicted RBP23.15■■□□□ 1.3
CTSB-202ENST00000353047 CDCA8Q53HL2 280 aa23.15■■□□□ 1.3
CTSB-202ENST00000353047 STK26Q9P289 416 aa23.15■■□□□ 1.3
CTSB-202ENST00000353047 DENND4BO75064 1496 aaPredicted RBP23.14■■□□□ 1.29
CTSB-202ENST00000353047 ERCC6Q03468 1493 aa23.13■■□□□ 1.29
CTSB-202ENST00000353047 KIF3BO15066 747 aa23.12■■□□□ 1.29
CTSB-202ENST00000353047 POGKQ9P215 609 aa23.12■■□□□ 1.29
CTSB-202ENST00000353047 DISP3Q9P2K9 1392 aa23.12■■□□□ 1.29
CTSB-202ENST00000353047 ZBTB7CA1YPR0 619 aa23.1■■□□□ 1.29
CTSB-202ENST00000353047 CFAP70Q5T0N1 1121 aa23.09■■□□□ 1.29
CTSB-202ENST00000353047 C9orf84Q5VXU9 1444 aa23.09■■□□□ 1.29
CTSB-202ENST00000353047 GGT6Q6P531 493 aa23.09■■□□□ 1.29
CTSB-202ENST00000353047 SPINK5Q9NQ38 1064 aaPredicted RBP23.09■■□□□ 1.29
CTSB-202ENST00000353047 CARMIL2Q6F5E8 1435 aa23.09■■□□□ 1.29
CTSB-202ENST00000353047 ITPRIPQ8IWB1 547 aa23.08■■□□□ 1.29
CTSB-202ENST00000353047 SPATA31E1Q6ZUB1 1445 aa23.08■■□□□ 1.29
CTSB-202ENST00000353047 NCLP19338 710 aaKnown RBP23.08■■□□□ 1.29
CTSB-202ENST00000353047 TEX14Q8IWB6 1497 aa23.08■■□□□ 1.29
CTSB-202ENST00000353047 APBB1O00213 710 aa23.08■■□□□ 1.28
CTSB-202ENST00000353047 ROCK1Q13464 1354 aa23.07■■□□□ 1.28
CTSB-202ENST00000353047 AFAP1Q8N556 730 aa23.07■■□□□ 1.28
CTSB-202ENST00000353047 ELL2O00472 640 aaPredicted RBP23.06■■□□□ 1.28
CTSB-202ENST00000353047 CAMSAP2Q08AD1 1489 aa23.06■■□□□ 1.28
CTSB-202ENST00000353047 IGHDP01880 384 aa23.06■■□□□ 1.28
CTSB-202ENST00000353047 DUSP27Q5VZP5 1158 aa23.06■■□□□ 1.28
CTSB-202ENST00000353047 HECW1Q76N89 1606 aa23.06■■□□□ 1.28
CTSB-202ENST00000353047 ZNF608Q9ULD9 1512 aaPredicted RBP23.06■■□□□ 1.28
CTSB-202ENST00000353047 TNNQ9UQP3 1299 aa23.05■■□□□ 1.28
CTSB-202ENST00000353047 RNF123Q5XPI4 1314 aa23.05■■□□□ 1.28
CTSB-202ENST00000353047 TMEM132EQ6IEE7 984 aa23.05■■□□□ 1.28
CTSB-202ENST00000353047 TROQ12816 1431 aaPredicted RBP23.05■■□□□ 1.28
CTSB-202ENST00000353047 KDM5BQ9UGL1 1544 aa23.05■■□□□ 1.28
CTSB-202ENST00000353047 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
CTSB-202ENST00000353047 SEC24BO95487 1268 aa23.03■■□□□ 1.28
CTSB-202ENST00000353047 PER1O15534 1290 aaPredicted RBP23.02■■□□□ 1.28
CTSB-202ENST00000353047 ARID3AQ99856 593 aa23.02■■□□□ 1.28
CTSB-202ENST00000353047 SMC4Q9NTJ3 1288 aa23.02■■□□□ 1.28
CTSB-202ENST00000353047 PLPPR3Q6T4P5 718 aa23.01■■□□□ 1.27
CTSB-202ENST00000353047 CFAP53Q96M91 514 aa23.01■■□□□ 1.27
CTSB-202ENST00000353047 DMRT2Q9Y5R5 561 aa23.01■■□□□ 1.27
CTSB-202ENST00000353047 PZPP20742 1482 aa23■■□□□ 1.27
CTSB-202ENST00000353047 IQGAP2Q13576 1575 aa22.99■■□□□ 1.27
CTSB-202ENST00000353047 E9PSI1 815 aa22.99■■□□□ 1.27
CTSB-202ENST00000353047 CUL7Q14999 1698 aa22.99■■□□□ 1.27
CTSB-202ENST00000353047 TSR2Q969E8 191 aaKnown RBP22.98■■□□□ 1.27
CTSB-202ENST00000353047 SLC12A5Q9H2X9 1139 aa22.98■■□□□ 1.27
CTSB-202ENST00000353047 PLEKHH1Q9ULM0 1364 aa22.98■■□□□ 1.27
CTSB-202ENST00000353047 SRPK2P78362 688 aaKnown RBP22.97■■□□□ 1.27
CTSB-202ENST00000353047 C8orf34Q49A92 452 aa22.97■■□□□ 1.27
CTSB-202ENST00000353047 HSP90AB1P08238 724 aaKnown RBP22.97■■□□□ 1.27
CTSB-202ENST00000353047 TRIM44Q96DX7 344 aaPredicted RBP22.96■■□□□ 1.27
CTSB-202ENST00000353047 SLFN5Q08AF3 891 aa22.96■■□□□ 1.27
CTSB-202ENST00000353047 TCP11L2Q8N4U5 519 aa22.96■■□□□ 1.27
CTSB-202ENST00000353047 MAPK8IP3Q9UPT6 1336 aa22.95■■□□□ 1.27
CTSB-202ENST00000353047 PLEKHG5O94827 1062 aa22.95■■□□□ 1.26
CTSB-202ENST00000353047 TESK2Q96S53 571 aa22.95■■□□□ 1.26
CTSB-202ENST00000353047 ERBINQ96RT1 1412 aa22.95■■□□□ 1.26
CTSB-202ENST00000353047 SOX12O15370 315 aa22.95■■□□□ 1.26
CTSB-202ENST00000353047 STAG3Q9UJ98 1225 aa22.95■■□□□ 1.26
CTSB-202ENST00000353047 PTPRGP23470 1445 aa22.95■■□□□ 1.26
CTSB-202ENST00000353047 PDZRN3Q9UPQ7 1066 aa22.94■■□□□ 1.26
CTSB-202ENST00000353047 SPAG9O60271 1321 aaKnown RBP22.94■■□□□ 1.26
CTSB-202ENST00000353047 NUP153P49790 1475 aaKnown RBP22.93■■□□□ 1.26
CTSB-202ENST00000353047 RWDD1Q9H446 243 aaPredicted RBP22.93■■□□□ 1.26
CTSB-202ENST00000353047 GPATCH8Q9UKJ3 1502 aaKnown RBP22.93■■□□□ 1.26
CTSB-202ENST00000353047 CTTNBP2Q8WZ74 1663 aa22.92■■□□□ 1.26
CTSB-202ENST00000353047 EFCAB2Q5VUJ9 269 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms