RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 DISP1Q96F81 1524 aa9.94□□□□□ -0.82
BRCA1-201ENST00000352993 ABCC2Q92887 1545 aa9.94□□□□□ -0.82
BRCA1-201ENST00000352993 CARD11Q9BXL7 1154 aa9.94□□□□□ -0.82
BRCA1-201ENST00000352993 KDM6BO15054 1643 aa9.93□□□□□ -0.82
BRCA1-201ENST00000352993 PNNQ9H307 717 aaKnown RBP9.93□□□□□ -0.82
BRCA1-201ENST00000352993 MYBBP1AQ9BQG0 1328 aaKnown RBP9.93□□□□□ -0.82
BRCA1-201ENST00000352993 ABCA8O94911 1581 aa9.93□□□□□ -0.82
BRCA1-201ENST00000352993 HSP90AA2PQ14568 343 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-201ENST00000352993 ARID4BQ4LE39 1312 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-201ENST00000352993 HSP90AA1P07900 732 aaKnown RBP9.92□□□□□ -0.82
BRCA1-201ENST00000352993 PDE3BQ13370 1112 aa9.92□□□□□ -0.82
BRCA1-201ENST00000352993 ZMYND15Q9H091 742 aa9.92□□□□□ -0.82
BRCA1-201ENST00000352993 RRAGDQ9NQL2 400 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-201ENST00000352993 C20orf194Q5TEA3 1177 aa9.92□□□□□ -0.82
BRCA1-201ENST00000352993 L1TD1Q5T7N2 865 aaKnown RBP9.92□□□□□ -0.82
BRCA1-201ENST00000352993 PRG4Q92954 1404 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-201ENST00000352993 GZF1Q9H116 711 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-201ENST00000352993 KIF15Q9NS87 1388 aa9.91□□□□□ -0.82
BRCA1-201ENST00000352993 RALBP1Q15311 655 aa9.91□□□□□ -0.82
BRCA1-201ENST00000352993 SAMD9Q5K651 1589 aa9.91□□□□□ -0.82
BRCA1-201ENST00000352993 CC2D1BQ5T0F9 858 aaKnown RBP9.91□□□□□ -0.82
BRCA1-201ENST00000352993 CYB5RLQ6IPT4 315 aa9.9□□□□□ -0.82
BRCA1-201ENST00000352993 CENPQQ7L2Z9 268 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-201ENST00000352993 BECN1Q14457 450 aa9.89□□□□□ -0.83
BRCA1-201ENST00000352993 SPRYD3Q8NCJ5 442 aa9.89□□□□□ -0.83
BRCA1-201ENST00000352993 KTN1Q86UP2 1357 aaKnown RBP9.89□□□□□ -0.83
BRCA1-201ENST00000352993 ST20-MTHFSA0A0A6YYL1 179 aa9.89□□□□□ -0.83
BRCA1-201ENST00000352993 BRD4O60885 1362 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-201ENST00000352993 NLRP13Q86W25 1043 aa9.88□□□□□ -0.83
BRCA1-201ENST00000352993 CHMP7Q8WUX9 453 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-201ENST00000352993 SPATA31E1Q6ZUB1 1445 aa9.88□□□□□ -0.83
BRCA1-201ENST00000352993 ANKRD30BQ9BXX2 1392 aa9.88□□□□□ -0.83
BRCA1-201ENST00000352993 C8orf34Q49A92 452 aa9.87□□□□□ -0.83
BRCA1-201ENST00000352993 DENND4BO75064 1496 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-201ENST00000352993 RPRD2Q5VT52 1461 aaKnown RBP9.87□□□□□ -0.83
BRCA1-201ENST00000352993 ROCK2O75116 1388 aaKnown RBP9.86□□□□□ -0.83
BRCA1-201ENST00000352993 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-201ENST00000352993 GOLGA6L3A6NEY3 463 aa9.86□□□□□ -0.83
BRCA1-201ENST00000352993 ABCA9Q8IUA7 1624 aa9.86□□□□□ -0.83
BRCA1-201ENST00000352993 MAGI3Q5TCQ9 1506 aa9.85□□□□□ -0.83
BRCA1-201ENST00000352993 MIA2Q96PC5 1412 aa9.85□□□□□ -0.83
BRCA1-201ENST00000352993 PLB1Q6P1J6 1458 aa9.85□□□□□ -0.83
BRCA1-201ENST00000352993 LRPPRCP42704 1394 aaKnown RBP9.85□□□□□ -0.83
BRCA1-201ENST00000352993 PKD2Q13563 968 aa9.85□□□□□ -0.83
BRCA1-201ENST00000352993 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-201ENST00000352993 EPRSP07814 1512 aaKnown RBP9.84□□□□□ -0.83
BRCA1-201ENST00000352993 HECW1Q76N89 1606 aa9.84□□□□□ -0.83
BRCA1-201ENST00000352993 ADAMTSL3P82987 1691 aa9.84□□□□□ -0.83
BRCA1-201ENST00000352993 EFCAB5A4FU69 1503 aa9.84□□□□□ -0.83
BRCA1-201ENST00000352993 TSPOAP1O95153 1857 aa9.84□□□□□ -0.83
BRCA1-201ENST00000352993 SUPT6HQ7KZ85 1726 aaKnown RBP9.83□□□□□ -0.84
BRCA1-201ENST00000352993 CANXP27824 592 aaKnown RBP9.83□□□□□ -0.84
BRCA1-201ENST00000352993 UPF2Q9HAU5 1272 aaKnown RBP9.83□□□□□ -0.84
BRCA1-201ENST00000352993 TEX14Q8IWB6 1497 aa9.82□□□□□ -0.84
BRCA1-201ENST00000352993 WDR43Q15061 677 aaKnown RBP eCLIP9.82□□□□□ -0.84
BRCA1-201ENST00000352993 PANK2Q9BZ23 570 aa9.82□□□□□ -0.84
BRCA1-201ENST00000352993 ZNF644Q9H582 1327 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-201ENST00000352993 FRMPD1Q5SYB0 1578 aa9.81□□□□□ -0.84
BRCA1-201ENST00000352993 RRP9O43818 475 aaKnown RBP9.81□□□□□ -0.84
BRCA1-201ENST00000352993 TRIM44Q96DX7 344 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-201ENST00000352993 KDM2BQ8NHM5 1336 aa9.81□□□□□ -0.84
BRCA1-201ENST00000352993 XRCC6P12956 609 aaKnown RBP eCLIP9.81□□□□□ -0.84
BRCA1-201ENST00000352993 ARAP3Q8WWN8 1544 aa9.8□□□□□ -0.84
BRCA1-201ENST00000352993 BCORL1Q5H9F3 1711 aa9.8□□□□□ -0.84
BRCA1-201ENST00000352993 EHBP1L1Q8N3D4 1523 aa9.79□□□□□ -0.84
BRCA1-201ENST00000352993 RICTORQ6R327 1708 aa9.79□□□□□ -0.84
BRCA1-201ENST00000352993 SEC24BO95487 1268 aa9.78□□□□□ -0.84
BRCA1-201ENST00000352993 MYH16Q9H6N6 1097 aa9.78□□□□□ -0.84
BRCA1-201ENST00000352993 RGL3Q3MIN7 710 aa9.78□□□□□ -0.84
BRCA1-201ENST00000352993 ADAMTS8Q9UP79 889 aa9.78□□□□□ -0.84
BRCA1-201ENST00000352993 GOLGA2Q08379 1002 aa9.78□□□□□ -0.84
BRCA1-201ENST00000352993 CLCN1P35523 988 aa9.77□□□□□ -0.84
BRCA1-201ENST00000352993 GCC2Q8IWJ2 1684 aa9.77□□□□□ -0.85
BRCA1-201ENST00000352993 CFAP74Q9C0B2 1584 aa9.77□□□□□ -0.85
BRCA1-201ENST00000352993 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-201ENST00000352993 JPH4Q96JJ6 628 aa9.76□□□□□ -0.85
BRCA1-201ENST00000352993 PANK3Q9H999 370 aa9.76□□□□□ -0.85
BRCA1-201ENST00000352993 CCDC146Q8IYE0 955 aa9.76□□□□□ -0.85
BRCA1-201ENST00000352993 ZMYM4Q5VZL5 1548 aa9.75□□□□□ -0.85
BRCA1-201ENST00000352993 PODXL2Q9NZ53 605 aa9.75□□□□□ -0.85
BRCA1-201ENST00000352993 ASXL2Q76L83 1435 aa9.75□□□□□ -0.85
BRCA1-201ENST00000352993 TRAK2O60296 914 aa9.75□□□□□ -0.85
BRCA1-201ENST00000352993 BCAR3O75815 825 aa9.75□□□□□ -0.85
BRCA1-201ENST00000352993 IGHDP01880 384 aa9.74□□□□□ -0.85
BRCA1-201ENST00000352993 ESPNB1AK53 854 aa9.74□□□□□ -0.85
BRCA1-201ENST00000352993 MCM4P33991 863 aa9.74□□□□□ -0.85
BRCA1-201ENST00000352993 DUSP27Q5VZP5 1158 aa9.74□□□□□ -0.85
BRCA1-201ENST00000352993 COG6Q9Y2V7 657 aa9.74□□□□□ -0.85
BRCA1-201ENST00000352993 DAPK1P53355 1430 aa9.73□□□□□ -0.85
BRCA1-201ENST00000352993 WDR7Q9Y4E6 1490 aa9.73□□□□□ -0.85
BRCA1-201ENST00000352993 MRE11P49959 708 aa9.73□□□□□ -0.85
BRCA1-201ENST00000352993 ARID3AQ99856 593 aa9.73□□□□□ -0.85
BRCA1-201ENST00000352993 CFDP1Q9UEE9 299 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-201ENST00000352993 TBC1D2Q9BYX2 928 aa9.72□□□□□ -0.85
BRCA1-201ENST00000352993 TCOF1Q13428 1488 aaKnown RBP9.72□□□□□ -0.85
BRCA1-201ENST00000352993 CARMIL2Q6F5E8 1435 aa9.72□□□□□ -0.85
BRCA1-201ENST00000352993 PARD3Q8TEW0 1356 aa9.72□□□□□ -0.85
BRCA1-201ENST00000352993 MAPK8IP3Q9UPT6 1336 aa9.72□□□□□ -0.85
BRCA1-201ENST00000352993 COL17A1Q9UMD9 1497 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-201ENST00000352993 KIAA1107Q9UPP5 1409 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms