RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 CSB-PGBD3P0DP91 1061 aa20.13■□□□□ 0.81
PTPN11-201ENST00000351677 ZNF330Q9Y3S2 320 aaPredicted RBP20.13■□□□□ 0.81
PTPN11-201ENST00000351677 ZBED9Q6R2W3 1325 aa20.13■□□□□ 0.81
PTPN11-201ENST00000351677 RAD54L2Q9Y4B4 1467 aa20.12■□□□□ 0.81
PTPN11-201ENST00000351677 FOXD4L1Q9NU39 408 aa20.11■□□□□ 0.81
PTPN11-201ENST00000351677 KIF21BO75037 1637 aa20.11■□□□□ 0.81
PTPN11-201ENST00000351677 RRP1P56182 461 aaKnown RBP20.1■□□□□ 0.81
PTPN11-201ENST00000351677 DRC7Q8IY82 874 aa20.1■□□□□ 0.81
PTPN11-201ENST00000351677 ZNF644Q9H582 1327 aaPredicted RBP20.1■□□□□ 0.81
PTPN11-201ENST00000351677 PTPRGP23470 1445 aa20.1■□□□□ 0.81
PTPN11-201ENST00000351677 TRIM6-TRIM34B2RNG4 842 aa20.09■□□□□ 0.81
PTPN11-201ENST00000351677 NGDNQ8NEJ9 315 aaKnown RBP20.09■□□□□ 0.81
PTPN11-201ENST00000351677 CRBNQ96SW2 442 aa20.09■□□□□ 0.81
PTPN11-201ENST00000351677 LTV1Q96GA3 475 aaPredicted RBP20.08■□□□□ 0.8
PTPN11-201ENST00000351677 FGD6Q6ZV73 1430 aa20.08■□□□□ 0.8
PTPN11-201ENST00000351677 NRDCO43847 1150 aa20.07■□□□□ 0.8
PTPN11-201ENST00000351677 GAPVD1Q14C86 1478 aa20.07■□□□□ 0.8
PTPN11-201ENST00000351677 ELL2O00472 640 aaPredicted RBP20.07■□□□□ 0.8
PTPN11-201ENST00000351677 AMPHP49418 695 aa20.06■□□□□ 0.8
PTPN11-201ENST00000351677 PDE4AP27815 886 aa20.05■□□□□ 0.8
PTPN11-201ENST00000351677 HMMRO75330 724 aa20.05■□□□□ 0.8
PTPN11-201ENST00000351677 NOL8Q76FK4 1167 aaKnown RBP20.05■□□□□ 0.8
PTPN11-201ENST00000351677 CHAF1AQ13111 956 aaPredicted RBP20.05■□□□□ 0.8
PTPN11-201ENST00000351677 SLC4A3P48751 1232 aa20.04■□□□□ 0.8
PTPN11-201ENST00000351677 LMOD3Q0VAK6 560 aa20.04■□□□□ 0.8
PTPN11-201ENST00000351677 CENPQQ7L2Z9 268 aaPredicted RBP20.04■□□□□ 0.8
PTPN11-201ENST00000351677 APAF1O14727 1248 aa20.04■□□□□ 0.8
PTPN11-201ENST00000351677 EID1Q9Y6B2 187 aa20.04■□□□□ 0.8
PTPN11-201ENST00000351677 GNL2Q13823 731 aaKnown RBP20.03■□□□□ 0.8
PTPN11-201ENST00000351677 E9PSI1 815 aa20.03■□□□□ 0.8
PTPN11-201ENST00000351677 PTMSP20962 102 aa20.03■□□□□ 0.8
PTPN11-201ENST00000351677 MYOM3Q5VTT5 1437 aa20.02■□□□□ 0.8
PTPN11-201ENST00000351677 CHMP3Q9Y3E7 222 aa20.02■□□□□ 0.8
PTPN11-201ENST00000351677 UACAQ9BZF9 1416 aa20.02■□□□□ 0.8
PTPN11-201ENST00000351677 COG6Q9Y2V7 657 aa20.02■□□□□ 0.8
PTPN11-201ENST00000351677 CGNL1Q0VF96 1302 aa20.02■□□□□ 0.8
PTPN11-201ENST00000351677 LRRC9Q6ZRR7 1453 aa20.02■□□□□ 0.79
PTPN11-201ENST00000351677 KIF7Q2M1P5 1343 aa20■□□□□ 0.79
PTPN11-201ENST00000351677 GOLGA6L3A6NEY3 463 aa20■□□□□ 0.79
PTPN11-201ENST00000351677 MINK1Q8N4C8 1332 aaPredicted RBP20■□□□□ 0.79
PTPN11-201ENST00000351677 EVC2Q86UK5 1308 aa20■□□□□ 0.79
PTPN11-201ENST00000351677 CCDC7Q96M83 1385 aa19.99■□□□□ 0.79
PTPN11-201ENST00000351677 FAM161AQ3B820 660 aa19.99■□□□□ 0.79
PTPN11-201ENST00000351677 VGFO15240 615 aaPredicted RBP19.98■□□□□ 0.79
PTPN11-201ENST00000351677 ZKSCAN2Q63HK3 967 aa19.97■□□□□ 0.79
PTPN11-201ENST00000351677 GPATCH3Q96I76 525 aa19.97■□□□□ 0.79
PTPN11-201ENST00000351677 ANKRD45Q5TZF3 282 aa19.97■□□□□ 0.79
PTPN11-201ENST00000351677 CHMP4AQ9BY43 222 aa19.96■□□□□ 0.79
PTPN11-201ENST00000351677 CUX1P39880 1505 aa19.96■□□□□ 0.79
PTPN11-201ENST00000351677 GORABQ5T7V8 394 aa19.96■□□□□ 0.79
PTPN11-201ENST00000351677 ISY1Q9ULR0 285 aaKnown RBP19.96■□□□□ 0.79
PTPN11-201ENST00000351677 FOXD4L5Q5VV16 416 aaPredicted RBP19.95■□□□□ 0.78
PTPN11-201ENST00000351677 FOXD4L4Q8WXT5 416 aaPredicted RBP19.95■□□□□ 0.78
PTPN11-201ENST00000351677 COG3Q96JB2 828 aa19.95■□□□□ 0.78
PTPN11-201ENST00000351677 SYAP1Q96A49 352 aaPredicted RBP19.93■□□□□ 0.78
PTPN11-201ENST00000351677 PRDM2Q13029 1718 aa19.93■□□□□ 0.78
PTPN11-201ENST00000351677 HSP90B1P14625 803 aaKnown RBP19.93■□□□□ 0.78
PTPN11-201ENST00000351677 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
PTPN11-201ENST00000351677 TAF7LQ5H9L4 462 aa19.92■□□□□ 0.78
PTPN11-201ENST00000351677 AQRO60306 1485 aaKnown RBP eCLIP19.91■□□□□ 0.783e-6■■■■□ 22.1
PTPN11-201ENST00000351677 KIAA2012Q0VF49 1180 aa19.91■□□□□ 0.78
PTPN11-201ENST00000351677 CNTLNQ9NXG0 1405 aa19.91■□□□□ 0.78
PTPN11-201ENST00000351677 WASHC2AQ641Q2 1341 aa19.91■□□□□ 0.78
PTPN11-201ENST00000351677 ARAP1Q96P48 1450 aa19.91■□□□□ 0.78
PTPN11-201ENST00000351677 ST18O60284 1047 aa19.9■□□□□ 0.78
PTPN11-201ENST00000351677 HDAC5Q9UQL6 1122 aa19.9■□□□□ 0.78
PTPN11-201ENST00000351677 RILPL2Q969X0 211 aa19.89■□□□□ 0.77
PTPN11-201ENST00000351677 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.89■□□□□ 0.77
PTPN11-201ENST00000351677 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.77
PTPN11-201ENST00000351677 ARID3AQ99856 593 aa19.89■□□□□ 0.77
PTPN11-201ENST00000351677 HTATSF1O43719 755 aaKnown RBP19.88■□□□□ 0.77
PTPN11-201ENST00000351677 ANKRD50Q9ULJ7 1429 aa19.87■□□□□ 0.77
PTPN11-201ENST00000351677 DIAPH1O60610 1272 aaKnown RBP19.87■□□□□ 0.77
PTPN11-201ENST00000351677 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
PTPN11-201ENST00000351677 RIPK4P57078 832 aa19.86■□□□□ 0.77
PTPN11-201ENST00000351677 FYCO1Q9BQS8 1478 aa19.85■□□□□ 0.77
PTPN11-201ENST00000351677 CCDC9Q9Y3X0 531 aaKnown RBP19.84■□□□□ 0.77
PTPN11-201ENST00000351677 CYB5RLQ6IPT4 315 aa19.84■□□□□ 0.77
PTPN11-201ENST00000351677 FANCIQ9NVI1 1328 aa19.83■□□□□ 0.76
PTPN11-201ENST00000351677 DZIP1LQ8IYY4 767 aaKnown RBP19.83■□□□□ 0.76
PTPN11-201ENST00000351677 RUNDC1Q96C34 613 aa19.82■□□□□ 0.76
PTPN11-201ENST00000351677 NCAPD3P42695 1498 aa19.82■□□□□ 0.76
PTPN11-201ENST00000351677 USP35Q9P2H5 1018 aa19.82■□□□□ 0.76
PTPN11-201ENST00000351677 NECTIN2Q92692 538 aa19.82■□□□□ 0.76
PTPN11-201ENST00000351677 DDX19BQ9UMR2 479 aa19.82■□□□□ 0.76
PTPN11-201ENST00000351677 KIF16BQ96L93 1317 aa19.81■□□□□ 0.76
PTPN11-201ENST00000351677 RRBP1Q9P2E9 1410 aaKnown RBP19.81■□□□□ 0.76
PTPN11-201ENST00000351677 FOXD4L6Q3SYB3 417 aaPredicted RBP19.81■□□□□ 0.76
PTPN11-201ENST00000351677 FOXD4L3Q6VB84 417 aaPredicted RBP19.81■□□□□ 0.76
PTPN11-201ENST00000351677 DDX11L8A8MPP1 907 aa19.81■□□□□ 0.76
PTPN11-201ENST00000351677 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
PTPN11-201ENST00000351677 CFTRP13569 1480 aa19.8■□□□□ 0.76
PTPN11-201ENST00000351677 EIF2S2P20042 333 aaKnown RBP19.79■□□□□ 0.76
PTPN11-201ENST00000351677 CSPP1Q1MSJ5 1256 aa19.79■□□□□ 0.76
PTPN11-201ENST00000351677 CLSTN1O94985 981 aa19.78■□□□□ 0.76
PTPN11-201ENST00000351677 C1orf141Q5JVX7 400 aa19.78■□□□□ 0.76
PTPN11-201ENST00000351677 TMEM132EQ6IEE7 984 aa19.78■□□□□ 0.76
PTPN11-201ENST00000351677 ADAMTS8Q9UP79 889 aa19.78■□□□□ 0.76
PTPN11-201ENST00000351677 GSE1Q14687 1217 aa19.78■□□□□ 0.76
PTPN11-201ENST00000351677 GGNBP2Q9H3C7 697 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms