RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 TERF2IPQ9NYB0 399 aa25.14■■□□□ 1.61
RNF38-202ENST00000350199 RCAN3Q9UKA8 241 aa25.14■■□□□ 1.61
RNF38-202ENST00000350199 ROCK1Q13464 1354 aa25.13■■□□□ 1.61
RNF38-202ENST00000350199 PTPN23Q9H3S7 1636 aa25.13■■□□□ 1.61
RNF38-202ENST00000350199 WASHC2AQ641Q2 1341 aa25.13■■□□□ 1.61
RNF38-202ENST00000350199 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
RNF38-202ENST00000350199 STAC3Q96MF2 364 aa25.1■■□□□ 1.61
RNF38-202ENST00000350199 ERICH6BQ5W0A0 696 aa25.09■■□□□ 1.61
RNF38-202ENST00000350199 HAP1P54257 671 aaPredicted RBP25.08■■□□□ 1.61
RNF38-202ENST00000350199 NBPF8Q3BBV2 869 aa25.08■■□□□ 1.61
RNF38-202ENST00000350199 EID1Q9Y6B2 187 aa25.07■■□□□ 1.6
RNF38-202ENST00000350199 RGS3P49796 1198 aa25.07■■□□□ 1.6
RNF38-202ENST00000350199 CNTLNQ9NXG0 1405 aa25.07■■□□□ 1.6
RNF38-202ENST00000350199 NBR1Q14596 966 aa25.06■■□□□ 1.6
RNF38-202ENST00000350199 CAMSAP2Q08AD1 1489 aa25.06■■□□□ 1.6
RNF38-202ENST00000350199 MS4A1P11836 297 aa25.06■■□□□ 1.6
RNF38-202ENST00000350199 ABCC5O15440 1437 aa25.06■■□□□ 1.6
RNF38-202ENST00000350199 CCDC146Q8IYE0 955 aa25.05■■□□□ 1.6
RNF38-202ENST00000350199 SCAPERQ9BY12 1400 aa25.04■■□□□ 1.6
RNF38-202ENST00000350199 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
RNF38-202ENST00000350199 PDE3BQ13370 1112 aa25.02■■□□□ 1.6
RNF38-202ENST00000350199 EVC2Q86UK5 1308 aa25.02■■□□□ 1.6
RNF38-202ENST00000350199 GOLGA2Q08379 1002 aa25.01■■□□□ 1.59
RNF38-202ENST00000350199 DDRGK1Q96HY6 314 aa25■■□□□ 1.59
RNF38-202ENST00000350199 A0A0G2JS52 829 aa25■■□□□ 1.59
RNF38-202ENST00000350199 ZBED9Q6R2W3 1325 aa24.99■■□□□ 1.59
RNF38-202ENST00000350199 CCDC141Q6ZP82 1450 aa24.98■■□□□ 1.59
RNF38-202ENST00000350199 KIF14Q15058 1648 aa24.98■■□□□ 1.59
RNF38-202ENST00000350199 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
RNF38-202ENST00000350199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.97■■□□□ 1.59
RNF38-202ENST00000350199 NBPF1Q3BBV0 1214 aa24.96■■□□□ 1.59
RNF38-202ENST00000350199 MINK1Q8N4C8 1332 aaPredicted RBP24.96■■□□□ 1.59
RNF38-202ENST00000350199 CENPJQ9HC77 1338 aaPredicted RBP24.96■■□□□ 1.59
RNF38-202ENST00000350199 AKNAQ7Z591 1439 aa24.95■■□□□ 1.59
RNF38-202ENST00000350199 PAK3O75914 559 aaPredicted RBP24.95■■□□□ 1.58
RNF38-202ENST00000350199 CHMP4BQ9H444 224 aaKnown RBP24.95■■□□□ 1.58
RNF38-202ENST00000350199 CTTNBP2Q8WZ74 1663 aa24.94■■□□□ 1.58
RNF38-202ENST00000350199 CGNL1Q0VF96 1302 aa24.94■■□□□ 1.58
RNF38-202ENST00000350199 KIF21AQ7Z4S6 1674 aa24.93■■□□□ 1.58
RNF38-202ENST00000350199 NUTM2FA1L443 756 aa24.93■■□□□ 1.58
RNF38-202ENST00000350199 CFAP70Q5T0N1 1121 aa24.92■■□□□ 1.58
RNF38-202ENST00000350199 BECN1Q14457 450 aa24.91■■□□□ 1.58
RNF38-202ENST00000350199 NCOA1Q15788 1441 aa24.9■■□□□ 1.58
RNF38-202ENST00000350199 ANKRD30BQ9BXX2 1392 aa24.9■■□□□ 1.58
RNF38-202ENST00000350199 ADAMTS12P58397 1594 aa24.9■■□□□ 1.58
RNF38-202ENST00000350199 RTF1Q92541 710 aaKnown RBP24.89■■□□□ 1.58
RNF38-202ENST00000350199 TMEM132EQ6IEE7 984 aa24.89■■□□□ 1.57
RNF38-202ENST00000350199 RAPGEF3O95398 923 aa24.88■■□□□ 1.57
RNF38-202ENST00000350199 NGDNQ8NEJ9 315 aaKnown RBP24.87■■□□□ 1.57
RNF38-202ENST00000350199 CALD1Q05682 793 aaKnown RBP24.87■■□□□ 1.57
RNF38-202ENST00000350199 RAPGEF6Q8TEU7 1601 aa24.86■■□□□ 1.57
RNF38-202ENST00000350199 UGGT2Q9NYU1 1516 aa24.85■■□□□ 1.57
RNF38-202ENST00000350199 NUP153P49790 1475 aaKnown RBP24.85■■□□□ 1.57
RNF38-202ENST00000350199 RRP7AQ9Y3A4 280 aaKnown RBP24.84■■□□□ 1.57
RNF38-202ENST00000350199 RBM19Q9Y4C8 960 aaKnown RBP24.84■■□□□ 1.57
RNF38-202ENST00000350199 PTPRKQ15262 1439 aa24.84■■□□□ 1.57
RNF38-202ENST00000350199 IPO8O15397 1037 aaKnown RBP24.84■■□□□ 1.57
RNF38-202ENST00000350199 GPATCH8Q9UKJ3 1502 aaKnown RBP24.83■■□□□ 1.57
RNF38-202ENST00000350199 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.79■■□□□ 1.56
RNF38-202ENST00000350199 ATP10BO94823 1461 aa24.79■■□□□ 1.56
RNF38-202ENST00000350199 APAF1O14727 1248 aa24.78■■□□□ 1.56
RNF38-202ENST00000350199 KIAA0556O60303 1618 aa24.76■■□□□ 1.55
RNF38-202ENST00000350199 ARXQ96QS3 562 aa24.76■■□□□ 1.55
RNF38-202ENST00000350199 SMC4Q9NTJ3 1288 aa24.76■■□□□ 1.55
RNF38-202ENST00000350199 CASC1Q6TDU7 716 aa24.75■■□□□ 1.55
RNF38-202ENST00000350199 COG3Q96JB2 828 aa24.75■■□□□ 1.55
RNF38-202ENST00000350199 BRD4O60885 1362 aaPredicted RBP24.75■■□□□ 1.55
RNF38-202ENST00000350199 ITPRIPQ8IWB1 547 aa24.75■■□□□ 1.55
RNF38-202ENST00000350199 EIF4G3O43432 1585 aaKnown RBP24.74■■□□□ 1.55
RNF38-202ENST00000350199 CD109Q6YHK3 1445 aa24.74■■□□□ 1.55
RNF38-202ENST00000350199 CABP2Q9NPB3 220 aa24.74■■□□□ 1.55
RNF38-202ENST00000350199 WDR62O43379 1518 aa24.74■■□□□ 1.55
RNF38-202ENST00000350199 TSHZ2Q9NRE2 1034 aa24.73■■□□□ 1.55
RNF38-202ENST00000350199 CFAP43Q8NDM7 1665 aa24.73■■□□□ 1.55
RNF38-202ENST00000350199 AMPHP49418 695 aa24.73■■□□□ 1.55
RNF38-202ENST00000350199 CLUAP1Q96AJ1 413 aa24.72■■□□□ 1.55
RNF38-202ENST00000350199 ADGRL1O94910 1474 aa24.72■■□□□ 1.55
RNF38-202ENST00000350199 E9PSI1 815 aa24.72■■□□□ 1.55
RNF38-202ENST00000350199 NOP58Q9Y2X3 529 aaKnown RBP24.72■■□□□ 1.55
RNF38-202ENST00000350199 ABCA5Q8WWZ7 1642 aa24.71■■□□□ 1.55
RNF38-202ENST00000350199 RRP1P56182 461 aaKnown RBP24.71■■□□□ 1.55
RNF38-202ENST00000350199 PLIN1O60240 522 aa24.7■■□□□ 1.54
RNF38-202ENST00000350199 TCERG1O14776 1098 aaKnown RBP24.7■■□□□ 1.54
RNF38-202ENST00000350199 ERBINQ96RT1 1412 aa24.7■■□□□ 1.54
RNF38-202ENST00000350199 ANP32BQ92688 251 aaKnown RBP24.7■■□□□ 1.54
RNF38-202ENST00000350199 ANP32EQ9BTT0 268 aa24.69■■□□□ 1.54
RNF38-202ENST00000350199 LMOD3Q0VAK6 560 aa24.69■■□□□ 1.54
RNF38-202ENST00000350199 RWDD1Q9H446 243 aaPredicted RBP24.69■■□□□ 1.54
RNF38-202ENST00000350199 RPRD2Q5VT52 1461 aaKnown RBP24.69■■□□□ 1.54
RNF38-202ENST00000350199 SLC52A1Q9NWF4 448 aa24.69■■□□□ 1.54
RNF38-202ENST00000350199 MAPKBP1O60336 1514 aa24.69■■□□□ 1.54
RNF38-202ENST00000350199 EIF5BO60841 1220 aaKnown RBP24.68■■□□□ 1.54
RNF38-202ENST00000350199 DIAPH1O60610 1272 aaKnown RBP24.64■■□□□ 1.54
RNF38-202ENST00000350199 OS9Q13438 667 aaPredicted RBP24.64■■□□□ 1.54
RNF38-202ENST00000350199 LTV1Q96GA3 475 aaPredicted RBP24.64■■□□□ 1.54
RNF38-202ENST00000350199 GGNBP2Q9H3C7 697 aa24.64■■□□□ 1.54
RNF38-202ENST00000350199 EXOC6Q8TAG9 804 aa24.64■■□□□ 1.54
RNF38-202ENST00000350199 C11orf95C9JLR9 678 aaPredicted RBP24.64■■□□□ 1.53
RNF38-202ENST00000350199 ADAMTS8Q9UP79 889 aa24.64■■□□□ 1.53
RNF38-202ENST00000350199 CSB-PGBD3P0DP91 1061 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms