RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 PKD2Q13563 968 aa28.6■■■□□ 2.17
TRIM3-201ENST00000345851 ADGBQ8N7X0 1667 aa28.6■■■□□ 2.17
TRIM3-201ENST00000345851 ANKRD30BQ9BXX2 1392 aa28.59■■■□□ 2.17
TRIM3-201ENST00000345851 ADGRL2O95490 1459 aa28.58■■■□□ 2.17
TRIM3-201ENST00000345851 PZPP20742 1482 aa28.58■■■□□ 2.17
TRIM3-201ENST00000345851 KIF15Q9NS87 1388 aa28.58■■■□□ 2.17
TRIM3-201ENST00000345851 OSCARQ8IYS5 282 aa28.57■■■□□ 2.16
TRIM3-201ENST00000345851 PREX2Q70Z35 1606 aa28.57■■■□□ 2.16
TRIM3-201ENST00000345851 SYCP2Q9BX26 1530 aa28.57■■■□□ 2.16
TRIM3-201ENST00000345851 NUP155O75694 1391 aa28.56■■■□□ 2.16
TRIM3-201ENST00000345851 EXOC6Q8TAG9 804 aa28.56■■■□□ 2.16
TRIM3-201ENST00000345851 PDE4AP27815 886 aa28.55■■■□□ 2.16
TRIM3-201ENST00000345851 SPATA31E1Q6ZUB1 1445 aa28.54■■■□□ 2.16
TRIM3-201ENST00000345851 DHX29Q7Z478 1369 aaKnown RBP28.54■■■□□ 2.16
TRIM3-201ENST00000345851 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.52■■■□□ 2.16
TRIM3-201ENST00000345851 TMC1Q8TDI8 760 aa28.51■■■□□ 2.15
TRIM3-201ENST00000345851 CCDC141Q6ZP82 1450 aa28.51■■■□□ 2.15
TRIM3-201ENST00000345851 ZNF326Q5BKZ1 582 aaKnown RBP28.5■■■□□ 2.15
TRIM3-201ENST00000345851 TCERG1O14776 1098 aaKnown RBP28.49■■■□□ 2.15
TRIM3-201ENST00000345851 USP35Q9P2H5 1018 aa28.49■■■□□ 2.15
TRIM3-201ENST00000345851 PNISRQ8TF01 805 aaKnown RBP28.48■■■□□ 2.15
TRIM3-201ENST00000345851 RRP1P56182 461 aaKnown RBP28.47■■■□□ 2.15
TRIM3-201ENST00000345851 BRPF3Q9ULD4 1205 aa28.47■■■□□ 2.15
TRIM3-201ENST00000345851 UHRF1BP1LA0JNW5 1464 aa28.46■■■□□ 2.15
TRIM3-201ENST00000345851 SHANK2Q9UPX8 1470 aa28.46■■■□□ 2.15
TRIM3-201ENST00000345851 ARHGEF12Q9NZN5 1544 aa28.46■■■□□ 2.15
TRIM3-201ENST00000345851 TEX14Q8IWB6 1497 aa28.46■■■□□ 2.15
TRIM3-201ENST00000345851 BACH2Q9BYV9 841 aa28.46■■■□□ 2.15
TRIM3-201ENST00000345851 RPRD2Q5VT52 1461 aaKnown RBP28.46■■■□□ 2.15
TRIM3-201ENST00000345851 MYO5CQ9NQX4 1742 aa28.46■■■□□ 2.15
TRIM3-201ENST00000345851 EFCAB2Q5VUJ9 269 aa28.44■■■□□ 2.14
TRIM3-201ENST00000345851 POLR1AO95602 1720 aaPredicted RBP28.44■■■□□ 2.14
TRIM3-201ENST00000345851 WASHC2CQ9Y4E1 1318 aa28.43■■■□□ 2.14
TRIM3-201ENST00000345851 PPM1GO15355 546 aaPredicted RBP28.43■■■□□ 2.14
TRIM3-201ENST00000345851 ARHGEF5Q12774 1597 aa28.43■■■□□ 2.14
TRIM3-201ENST00000345851 AFAP1Q8N556 730 aa28.42■■■□□ 2.14
TRIM3-201ENST00000345851 PLCH2O75038 1416 aa28.41■■■□□ 2.14
TRIM3-201ENST00000345851 KIAA1107Q9UPP5 1409 aa28.41■■■□□ 2.14
TRIM3-201ENST00000345851 SKAP1Q86WV1 359 aa28.4■■■□□ 2.14
TRIM3-201ENST00000345851 RSPH4AQ5TD94 716 aa28.39■■■□□ 2.13
TRIM3-201ENST00000345851 RCAN3Q9UKA8 241 aa28.37■■■□□ 2.13
TRIM3-201ENST00000345851 TRAPPC8Q9Y2L5 1435 aa28.37■■■□□ 2.13
TRIM3-201ENST00000345851 USP47Q96K76 1375 aa28.36■■■□□ 2.13
TRIM3-201ENST00000345851 BCORL1Q5H9F3 1711 aa28.33■■■□□ 2.13
TRIM3-201ENST00000345851 WDR7Q9Y4E6 1490 aa28.33■■■□□ 2.12
TRIM3-201ENST00000345851 PLEKHH2Q8IVE3 1493 aa28.32■■■□□ 2.12
TRIM3-201ENST00000345851 KDM2AQ9Y2K7 1162 aa28.32■■■□□ 2.12
TRIM3-201ENST00000345851 SLC4A3P48751 1232 aa28.32■■■□□ 2.12
TRIM3-201ENST00000345851 GSE1Q14687 1217 aa28.31■■■□□ 2.12
TRIM3-201ENST00000345851 EIF5BO60841 1220 aaKnown RBP28.31■■■□□ 2.12
TRIM3-201ENST00000345851 MS4A1P11836 297 aa28.3■■■□□ 2.12
TRIM3-201ENST00000345851 ASXL2Q76L83 1435 aa28.3■■■□□ 2.12
TRIM3-201ENST00000345851 NPM1P06748 294 aaKnown RBP eCLIP28.29■■■□□ 2.12
TRIM3-201ENST00000345851 PLIN1O60240 522 aa28.26■■■□□ 2.11
TRIM3-201ENST00000345851 NFKBIBQ15653 356 aa28.26■■■□□ 2.11
TRIM3-201ENST00000345851 SPAG9O60271 1321 aaKnown RBP28.25■■■□□ 2.11
TRIM3-201ENST00000345851 RGL3Q3MIN7 710 aa28.24■■■□□ 2.11
TRIM3-201ENST00000345851 FRAT1Q92837 279 aaPredicted RBP28.23■■■□□ 2.11
TRIM3-201ENST00000345851 DDRGK1Q96HY6 314 aa28.23■■■□□ 2.11
TRIM3-201ENST00000345851 LRPPRCP42704 1394 aaKnown RBP28.23■■■□□ 2.11
TRIM3-201ENST00000345851 ABCC1P33527 1531 aa28.22■■■□□ 2.11
TRIM3-201ENST00000345851 FAM135AQ9P2D6 1515 aa28.22■■■□□ 2.11
TRIM3-201ENST00000345851 CDCA7LQ96GN5 454 aa28.21■■■□□ 2.11
TRIM3-201ENST00000345851 FANCAO15360 1455 aa28.2■■■□□ 2.11
TRIM3-201ENST00000345851 DCAF11Q8TEB1 546 aa28.19■■■□□ 2.1
TRIM3-201ENST00000345851 UBE2Q2Q8WVN8 375 aa28.18■■■□□ 2.1
TRIM3-201ENST00000345851 MYBBP1AQ9BQG0 1328 aaKnown RBP28.17■■■□□ 2.1
TRIM3-201ENST00000345851 CYB5RLQ6IPT4 315 aa28.17■■■□□ 2.1
TRIM3-201ENST00000345851 DAXXQ9UER7 740 aaPredicted RBP28.17■■■□□ 2.1
TRIM3-201ENST00000345851 MAST1Q9Y2H9 1570 aa28.16■■■□□ 2.1
TRIM3-201ENST00000345851 BRD4O60885 1362 aaPredicted RBP28.15■■■□□ 2.1
TRIM3-201ENST00000345851 KDM5DQ9BY66 1539 aa28.15■■■□□ 2.1
TRIM3-201ENST00000345851 CRBNQ96SW2 442 aa28.14■■■□□ 2.1
TRIM3-201ENST00000345851 SCAPERQ9BY12 1400 aa28.14■■■□□ 2.1
TRIM3-201ENST00000345851 CARD11Q9BXL7 1154 aa28.12■■■□□ 2.09
TRIM3-201ENST00000345851 ARID4BQ4LE39 1312 aaPredicted RBP28.12■■■□□ 2.09
TRIM3-201ENST00000345851 ROCK2O75116 1388 aaKnown RBP28.11■■■□□ 2.09
TRIM3-201ENST00000345851 ADGRL1O94910 1474 aa28.1■■■□□ 2.09
TRIM3-201ENST00000345851 KDM5CP41229 1560 aa28.1■■■□□ 2.09
TRIM3-201ENST00000345851 PLXNC1O60486 1568 aa28.1■■■□□ 2.09
TRIM3-201ENST00000345851 DUOX2Q9NRD8 1548 aa28.1■■■□□ 2.09
TRIM3-201ENST00000345851 RALBP1Q15311 655 aa28.08■■■□□ 2.09
TRIM3-201ENST00000345851 ABCA9Q8IUA7 1624 aa28.08■■■□□ 2.09
TRIM3-201ENST00000345851 ST20-MTHFSA0A0A6YYL1 179 aa28.08■■■□□ 2.09
TRIM3-201ENST00000345851 CCDC144AA2RUR9 1427 aa28.06■■■□□ 2.08
TRIM3-201ENST00000345851 PLA2R1Q13018 1463 aa28.06■■■□□ 2.08
TRIM3-201ENST00000345851 KIF3BO15066 747 aa28.06■■■□□ 2.08
TRIM3-201ENST00000345851 PDE3BQ13370 1112 aa28.05■■■□□ 2.08
TRIM3-201ENST00000345851 FRAT2O75474 233 aaPredicted RBP28.03■■■□□ 2.08
TRIM3-201ENST00000345851 UNC13BO14795 1591 aa28.03■■■□□ 2.08
TRIM3-201ENST00000345851 ZFYVE16Q7Z3T8 1539 aa28.03■■■□□ 2.08
TRIM3-201ENST00000345851 ERBINQ96RT1 1412 aa28.02■■■□□ 2.08
TRIM3-201ENST00000345851 C20orf194Q5TEA3 1177 aa28.02■■■□□ 2.08
TRIM3-201ENST00000345851 NLRP13Q86W25 1043 aa28.01■■■□□ 2.07
TRIM3-201ENST00000345851 CD109Q6YHK3 1445 aa28.01■■■□□ 2.07
TRIM3-201ENST00000345851 ARAP3Q8WWN8 1544 aa27.99■■■□□ 2.07
TRIM3-201ENST00000345851 ATP7AQ04656 1500 aa27.96■■■□□ 2.07
TRIM3-201ENST00000345851 IQGAP3Q86VI3 1631 aa27.96■■■□□ 2.07
TRIM3-201ENST00000345851 RAPGEF3O95398 923 aa27.95■■■□□ 2.07
TRIM3-201ENST00000345851 NBPF1Q3BBV0 1214 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms